BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022713
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   249   3e-64
ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabi...   248   8e-64
ref|XP_002871281.1| structural maintenance of chromosomes family...   248   8e-64
gb|ACQ84165.1| truncated structural maintenance of chromosomes f...   248   8e-64
ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|2...   244   1e-62

>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  249 bits (636), Expect = 3e-64
 Identities = 125/174 (71%), Positives = 144/174 (82%), Gaps = 4/174 (2%)
 Frame = +1

Query: 127 MVDSRVF----SGVNRSEAGIVSKIRLENFMCHSNLEIQLGDFVNFVTGQNGSGKSAILT 294
           M DS VF    S  +RS AGI+ KIRLENFMCHS+L+I+LG+++NFVTGQNGSGKSAILT
Sbjct: 1   MGDSTVFTQPLSASHRSSAGIILKIRLENFMCHSSLQIELGEWLNFVTGQNGSGKSAILT 60

Query: 295 ALCVAFGCRARGTQRASSLKDFIKTGCSYALVHVELKNKGEDAYKPETYGDXXXXXXXXX 474
           ALCVAFG RA+ TQRA++LK+FIKTGCSYA++ VE+KN+GEDA+KPE YGD         
Sbjct: 61  ALCVAFGSRAKETQRATTLKEFIKTGCSYAVIQVEIKNEGEDAFKPEIYGDVIIVERRIS 120

Query: 475 XXXXXXVLKDHQGKRVASRKEDLIDIVEHFNIDVENPCVIMSQDKSREFLHSGN 636
                 VLKDHQGKRVASRKEDL ++VEHFNIDVENPCVIMSQDKSREFLHSGN
Sbjct: 121 VSTSSTVLKDHQGKRVASRKEDLHELVEHFNIDVENPCVIMSQDKSREFLHSGN 174


>ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana]
           gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis
           thaliana] gi|332003807|gb|AED91190.1| structural
           maintenance of chromosomes 6A [Arabidopsis thaliana]
          Length = 1058

 Score =  248 bits (633), Expect = 8e-64
 Identities = 117/159 (73%), Positives = 138/159 (86%)
 Frame = +1

Query: 160 RSEAGIVSKIRLENFMCHSNLEIQLGDFVNFVTGQNGSGKSAILTALCVAFGCRARGTQR 339
           ++ +G + +IRLENFMCHSNLEI+ GD+VNF+TGQNGSGKSAILTALCVAFGCRARGTQR
Sbjct: 17  QTSSGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQR 76

Query: 340 ASSLKDFIKTGCSYALVHVELKNKGEDAYKPETYGDXXXXXXXXXXXXXXXVLKDHQGKR 519
           A++LKDFIKTGCSYALV+VELKN+GEDA+KPE YGD               VLKDHQG++
Sbjct: 77  AATLKDFIKTGCSYALVYVELKNQGEDAFKPEIYGDTLIIERRISDSTSLTVLKDHQGRK 136

Query: 520 VASRKEDLIDIVEHFNIDVENPCVIMSQDKSREFLHSGN 636
           ++SRKE+L ++VEH+NIDVENPCVIMSQDKSREFLHSGN
Sbjct: 137 ISSRKEELRELVEHYNIDVENPCVIMSQDKSREFLHSGN 175


>ref|XP_002871281.1| structural maintenance of chromosomes family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297317118|gb|EFH47540.1|
           structural maintenance of chromosomes family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1063

 Score =  248 bits (633), Expect = 8e-64
 Identities = 117/159 (73%), Positives = 135/159 (84%)
 Frame = +1

Query: 160 RSEAGIVSKIRLENFMCHSNLEIQLGDFVNFVTGQNGSGKSAILTALCVAFGCRARGTQR 339
           R  +G + +IRLENFMCHSNLEI+ GD+VNF+TGQNGSGKSAILTALCVAFGCRARGTQR
Sbjct: 16  RPSSGTIVRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQR 75

Query: 340 ASSLKDFIKTGCSYALVHVELKNKGEDAYKPETYGDXXXXXXXXXXXXXXXVLKDHQGKR 519
           A++LKDFIK GCSYALVHVELKN+GEDA+KPE YGD               VLKDHQG++
Sbjct: 76  AATLKDFIKNGCSYALVHVELKNQGEDAFKPEIYGDTLIIERRISDSTSLTVLKDHQGRK 135

Query: 520 VASRKEDLIDIVEHFNIDVENPCVIMSQDKSREFLHSGN 636
           ++SR+E+L  +VEH+NIDVENPCVIMSQDKSREFLHSGN
Sbjct: 136 ISSRREELRQLVEHYNIDVENPCVIMSQDKSREFLHSGN 174


>gb|ACQ84165.1| truncated structural maintenance of chromosomes family protein 6A
           [Arabidopsis thaliana]
          Length = 876

 Score =  248 bits (633), Expect = 8e-64
 Identities = 117/159 (73%), Positives = 138/159 (86%)
 Frame = +1

Query: 160 RSEAGIVSKIRLENFMCHSNLEIQLGDFVNFVTGQNGSGKSAILTALCVAFGCRARGTQR 339
           ++ +G + +IRLENFMCHSNLEI+ GD+VNF+TGQNGSGKSAILTALCVAFGCRARGTQR
Sbjct: 17  QTSSGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQR 76

Query: 340 ASSLKDFIKTGCSYALVHVELKNKGEDAYKPETYGDXXXXXXXXXXXXXXXVLKDHQGKR 519
           A++LKDFIKTGCSYALV+VELKN+GEDA+KPE YGD               VLKDHQG++
Sbjct: 77  AATLKDFIKTGCSYALVYVELKNQGEDAFKPEIYGDTLIIERRISDSTSLTVLKDHQGRK 136

Query: 520 VASRKEDLIDIVEHFNIDVENPCVIMSQDKSREFLHSGN 636
           ++SRKE+L ++VEH+NIDVENPCVIMSQDKSREFLHSGN
Sbjct: 137 ISSRKEELRELVEHYNIDVENPCVIMSQDKSREFLHSGN 175


>ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|222840926|gb|EEE78473.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  244 bits (623), Expect = 1e-62
 Identities = 118/175 (67%), Positives = 142/175 (81%), Gaps = 5/175 (2%)
 Frame = +1

Query: 127 MVDSRVFSGVN-----RSEAGIVSKIRLENFMCHSNLEIQLGDFVNFVTGQNGSGKSAIL 291
           M DSRVF   N     RS  G +S+IRLENFMCH NL+I+L  +VNFVTG+NGSGKSAIL
Sbjct: 1   MDDSRVFGDSNIPTTFRSGVGTISRIRLENFMCHDNLQIELDQWVNFVTGRNGSGKSAIL 60

Query: 292 TALCVAFGCRARGTQRASSLKDFIKTGCSYALVHVELKNKGEDAYKPETYGDXXXXXXXX 471
           TALC+AFGCRA+GTQRA++LKDFIKTGCSYA+V VE++N+GE+++KP+ YGD        
Sbjct: 61  TALCIAFGCRAKGTQRAATLKDFIKTGCSYAVVEVEVRNRGEESFKPDIYGDSIIIERRI 120

Query: 472 XXXXXXXVLKDHQGKRVASRKEDLIDIVEHFNIDVENPCVIMSQDKSREFLHSGN 636
                  VLKDHQG++VASR+EDL +++EHFNIDVENPCVIMSQDKSREFLHSGN
Sbjct: 121 NQSSSTTVLKDHQGRKVASRREDLRELIEHFNIDVENPCVIMSQDKSREFLHSGN 175