BLASTX nr result

ID: Bupleurum21_contig00022672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022672
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146780.1| PREDICTED: uncharacterized protein LOC101215...    88   6e-16
ref|XP_002306600.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_002284315.2| PREDICTED: uncharacterized protein LOC100249...    72   5e-11
gb|AFK38660.1| unknown [Lotus japonicus] gi|388508536|gb|AFK4233...    71   8e-11
ref|XP_002891221.1| hypothetical protein ARALYDRAFT_314057 [Arab...    71   1e-10

>ref|XP_004146780.1| PREDICTED: uncharacterized protein LOC101215134 [Cucumis sativus]
           gi|449520817|ref|XP_004167429.1| PREDICTED:
           uncharacterized LOC101215134 [Cucumis sativus]
          Length = 119

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/75 (62%), Positives = 52/75 (69%)
 Frame = -1

Query: 237 SNWDYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFNPKPPTH 58
           S+WDY+ L+ LRPILAI F FS             LVHVPLVQEIFGLRKK    KPPT 
Sbjct: 16  SHWDYLNLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPT- 74

Query: 57  RRLSKFYNSLNAQNS 13
           RRLSKFY+SLN+Q S
Sbjct: 75  RRLSKFYDSLNSQTS 89


>ref|XP_002306600.1| predicted protein [Populus trichocarpa] gi|222856049|gb|EEE93596.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/76 (56%), Positives = 50/76 (65%)
 Frame = -1

Query: 237 SNWDYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFNPKPPTH 58
           S WDY+ L  LRP LAI FV S             LVHVPLVQEIFGLRKK   PKP T 
Sbjct: 14  SLWDYLGLLILRPALAILFVTSFISIGWFLAWKLVLVHVPLVQEIFGLRKKLTKPKPLT- 72

Query: 57  RRLSKFYNSLNAQNST 10
           RR+S+ YN+++A+NST
Sbjct: 73  RRISRIYNTIDARNST 88


>ref|XP_002284315.2| PREDICTED: uncharacterized protein LOC100249007 [Vitis vinifera]
          Length = 96

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -1

Query: 243 VASNWDYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFNPKPP 64
           V SN D+  LF LRP LA  FV S             LVHVPLVQEIFGLR KS  PKP 
Sbjct: 18  VISNLDHFNLFILRPFLATTFVLSFILLGWLLAWKLVLVHVPLVQEIFGLRNKSRKPKPQ 77

Query: 63  THRRLSKFYNSLNAQN 16
           T  RLS+FY+++NA++
Sbjct: 78  T-GRLSRFYSNINARD 92


>gb|AFK38660.1| unknown [Lotus japonicus] gi|388508536|gb|AFK42334.1| unknown
           [Lotus japonicus]
          Length = 83

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/81 (49%), Positives = 49/81 (60%)
 Frame = -1

Query: 255 VMGGVASNWDYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFN 76
           +M    S W+Y    FLRP+LAI FV +             LVHVPLVQEIFGL+KK   
Sbjct: 1   MMESSLSFWEYTVFLFLRPLLAISFVLTLISLGWLLAWKLVLVHVPLVQEIFGLKKKPVR 60

Query: 75  PKPPTHRRLSKFYNSLNAQNS 13
            KPPT  RLSK Y++++A NS
Sbjct: 61  SKPPT-GRLSKIYSTMSAPNS 80


>ref|XP_002891221.1| hypothetical protein ARALYDRAFT_314057 [Arabidopsis lyrata subsp.
           lyrata] gi|297337063|gb|EFH67480.1| hypothetical protein
           ARALYDRAFT_314057 [Arabidopsis lyrata subsp. lyrata]
          Length = 83

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/72 (50%), Positives = 46/72 (63%)
 Frame = -1

Query: 228 DYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFNPKPPTHRRL 49
           D +  F +RP+LAI FV               L HVPLVQEIFGLRKK+F PKP +  R+
Sbjct: 8   DNLFFFIIRPLLAISFVVCFIALWWFLAWKLVLSHVPLVQEIFGLRKKTFKPKPESRGRI 67

Query: 48  SKFYNSLNAQNS 13
           +KFY S+++QNS
Sbjct: 68  AKFYRSISSQNS 79


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