BLASTX nr result
ID: Bupleurum21_contig00022672
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00022672 (309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004146780.1| PREDICTED: uncharacterized protein LOC101215... 88 6e-16 ref|XP_002306600.1| predicted protein [Populus trichocarpa] gi|2... 78 8e-13 ref|XP_002284315.2| PREDICTED: uncharacterized protein LOC100249... 72 5e-11 gb|AFK38660.1| unknown [Lotus japonicus] gi|388508536|gb|AFK4233... 71 8e-11 ref|XP_002891221.1| hypothetical protein ARALYDRAFT_314057 [Arab... 71 1e-10 >ref|XP_004146780.1| PREDICTED: uncharacterized protein LOC101215134 [Cucumis sativus] gi|449520817|ref|XP_004167429.1| PREDICTED: uncharacterized LOC101215134 [Cucumis sativus] Length = 119 Score = 88.2 bits (217), Expect = 6e-16 Identities = 47/75 (62%), Positives = 52/75 (69%) Frame = -1 Query: 237 SNWDYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFNPKPPTH 58 S+WDY+ L+ LRPILAI F FS LVHVPLVQEIFGLRKK KPPT Sbjct: 16 SHWDYLNLYILRPILAILFTFSLISLGWFLAWKLVLVHVPLVQEIFGLRKKPAKSKPPT- 74 Query: 57 RRLSKFYNSLNAQNS 13 RRLSKFY+SLN+Q S Sbjct: 75 RRLSKFYDSLNSQTS 89 >ref|XP_002306600.1| predicted protein [Populus trichocarpa] gi|222856049|gb|EEE93596.1| predicted protein [Populus trichocarpa] Length = 91 Score = 77.8 bits (190), Expect = 8e-13 Identities = 43/76 (56%), Positives = 50/76 (65%) Frame = -1 Query: 237 SNWDYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFNPKPPTH 58 S WDY+ L LRP LAI FV S LVHVPLVQEIFGLRKK PKP T Sbjct: 14 SLWDYLGLLILRPALAILFVTSFISIGWFLAWKLVLVHVPLVQEIFGLRKKLTKPKPLT- 72 Query: 57 RRLSKFYNSLNAQNST 10 RR+S+ YN+++A+NST Sbjct: 73 RRISRIYNTIDARNST 88 >ref|XP_002284315.2| PREDICTED: uncharacterized protein LOC100249007 [Vitis vinifera] Length = 96 Score = 72.0 bits (175), Expect = 5e-11 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -1 Query: 243 VASNWDYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFNPKPP 64 V SN D+ LF LRP LA FV S LVHVPLVQEIFGLR KS PKP Sbjct: 18 VISNLDHFNLFILRPFLATTFVLSFILLGWLLAWKLVLVHVPLVQEIFGLRNKSRKPKPQ 77 Query: 63 THRRLSKFYNSLNAQN 16 T RLS+FY+++NA++ Sbjct: 78 T-GRLSRFYSNINARD 92 >gb|AFK38660.1| unknown [Lotus japonicus] gi|388508536|gb|AFK42334.1| unknown [Lotus japonicus] Length = 83 Score = 71.2 bits (173), Expect = 8e-11 Identities = 40/81 (49%), Positives = 49/81 (60%) Frame = -1 Query: 255 VMGGVASNWDYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFN 76 +M S W+Y FLRP+LAI FV + LVHVPLVQEIFGL+KK Sbjct: 1 MMESSLSFWEYTVFLFLRPLLAISFVLTLISLGWLLAWKLVLVHVPLVQEIFGLKKKPVR 60 Query: 75 PKPPTHRRLSKFYNSLNAQNS 13 KPPT RLSK Y++++A NS Sbjct: 61 SKPPT-GRLSKIYSTMSAPNS 80 >ref|XP_002891221.1| hypothetical protein ARALYDRAFT_314057 [Arabidopsis lyrata subsp. lyrata] gi|297337063|gb|EFH67480.1| hypothetical protein ARALYDRAFT_314057 [Arabidopsis lyrata subsp. lyrata] Length = 83 Score = 70.9 bits (172), Expect = 1e-10 Identities = 36/72 (50%), Positives = 46/72 (63%) Frame = -1 Query: 228 DYIQLFFLRPILAIFFVFSXXXXXXXXXXXXXLVHVPLVQEIFGLRKKSFNPKPPTHRRL 49 D + F +RP+LAI FV L HVPLVQEIFGLRKK+F PKP + R+ Sbjct: 8 DNLFFFIIRPLLAISFVVCFIALWWFLAWKLVLSHVPLVQEIFGLRKKTFKPKPESRGRI 67 Query: 48 SKFYNSLNAQNS 13 +KFY S+++QNS Sbjct: 68 AKFYRSISSQNS 79