BLASTX nr result

ID: Bupleurum21_contig00022671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022671
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis v...   366   4e-99
ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana] ...   353   3e-95
ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|2...   353   3e-95
ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cu...   353   4e-95
gb|AAM61603.1| unknown [Arabidopsis thaliana]                         351   1e-94

>ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis vinifera]
           gi|297738884|emb|CBI28129.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  366 bits (940), Expect = 4e-99
 Identities = 184/281 (65%), Positives = 219/281 (77%)
 Frame = +2

Query: 62  QLLIAVVFSLAIAGVSYRNKSLDLSGAILGFIVTTLHLAVDYRFGAMLLVFFLTSSRLTK 241
           Q +IA++FS AIA  S+R KSLDLSGA  GF V T+H  V YR+GAMLL FFLTSS+LTK
Sbjct: 7   QPIIAILFSAAIAIRSFRRKSLDLSGAFAGFAVLTIHFGVGYRYGAMLLAFFLTSSKLTK 66

Query: 242 YGYEKKRRIDPDYILGGERNWIQVLSNTGIASLLVIMFWVVTGSEDKCLNSTESMYATAL 421
           +G EKKR +D D+  GG+RNW QVL N+GI+++L ++ W +TG +DKCL+S ES   T+L
Sbjct: 67  FGEEKKRLVDADFKEGGQRNWKQVLFNSGISAVLALILWRLTGWQDKCLDSKESSLITSL 126

Query: 422 IGGIIGHYSCSNGDTWSSEIGILSDAQPRLITTFKPVRRGTNGGVTKXXXXXXXXXXXXX 601
           IGGIIGHYSC NGDTWSSE+GILSD+QPRLITTFKPVR+GTNGGVTK             
Sbjct: 127 IGGIIGHYSCCNGDTWSSELGILSDSQPRLITTFKPVRKGTNGGVTKTGLLAATAAGGVI 186

Query: 602 XXTFALTGYLTTDCMFDKLLKQLLVIPLSTLAGLLGSVIDSLLGATLQFTGFCSIRSKIV 781
             TF L G+ TT C  D  LKQLLVIPLS +AGL GS+IDSLLGATLQ++GFCS+R+K+V
Sbjct: 187 GLTFVLIGFFTTKCASDVALKQLLVIPLSAVAGLCGSLIDSLLGATLQYSGFCSVRNKVV 246

Query: 782 WKPAPTVRKISGLHILDNNAVNLVSIFLTVMLTAFASIYIF 904
            KP PTVRKISG+ ILDNN VNLVSI LT MLT+ A +YIF
Sbjct: 247 GKPGPTVRKISGISILDNNGVNLVSILLTSMLTSIACLYIF 287


>ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana]
           gi|334187781|ref|NP_001190343.1| uncharacterized protein
           [Arabidopsis thaliana] gi|110738248|dbj|BAF01053.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332005384|gb|AED92767.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332005385|gb|AED92768.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 288

 Score =  353 bits (907), Expect = 3e-95
 Identities = 175/281 (62%), Positives = 216/281 (76%)
 Frame = +2

Query: 62  QLLIAVVFSLAIAGVSYRNKSLDLSGAILGFIVTTLHLAVDYRFGAMLLVFFLTSSRLTK 241
           +L+ AV+ S  IA  SY+ KSLDLSG I GF+V T+H    +R+GA+LLVFFLTSS+LTK
Sbjct: 8   RLIFAVIISSLIAFRSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTK 67

Query: 242 YGYEKKRRIDPDYILGGERNWIQVLSNTGIASLLVIMFWVVTGSEDKCLNSTESMYATAL 421
            G +KKRR+D ++  GG+RNW+QVL N+GIAS+LV++   +TG +DKCL+S +S   TAL
Sbjct: 68  VGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTAL 127

Query: 422 IGGIIGHYSCSNGDTWSSEIGILSDAQPRLITTFKPVRRGTNGGVTKXXXXXXXXXXXXX 601
           IGGIIGHY+C NGDTWSSE+G+LSDAQPRLITTFKPV++GTNGGVTK             
Sbjct: 128 IGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTV 187

Query: 602 XXTFALTGYLTTDCMFDKLLKQLLVIPLSTLAGLLGSVIDSLLGATLQFTGFCSIRSKIV 781
             TF + G  T  C  D  LKQLLVIPLS LAGL GS+IDS+LGAT+QF+GFCS+R+K+V
Sbjct: 188 GLTFLIFGLFTASCASDVALKQLLVIPLSALAGLCGSLIDSILGATIQFSGFCSVRNKVV 247

Query: 782 WKPAPTVRKISGLHILDNNAVNLVSIFLTVMLTAFASIYIF 904
            KP PTV+KISG+ ILDNN VN VSI LT  LT+ AS+YIF
Sbjct: 248 GKPGPTVKKISGVDILDNNGVNFVSILLTSFLTSIASVYIF 288


>ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|222865837|gb|EEF02968.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  353 bits (907), Expect = 3e-95
 Identities = 178/278 (64%), Positives = 213/278 (76%)
 Frame = +2

Query: 71  IAVVFSLAIAGVSYRNKSLDLSGAILGFIVTTLHLAVDYRFGAMLLVFFLTSSRLTKYGY 250
           +AV+ S  IA  +YR KSLD++GA+ GFIV TLH A+ YRFGA+LLVFF +SS+LTK G 
Sbjct: 10  VAVLISFVIAIKAYRRKSLDVTGAVAGFIVMTLHFAISYRFGAILLVFFFSSSKLTKVGE 69

Query: 251 EKKRRIDPDYILGGERNWIQVLSNTGIASLLVIMFWVVTGSEDKCLNSTESMYATALIGG 430
           +KKRR D ++  GG+RNWIQVL+N+GIAS+LV+    + G EDKCL+  ES   T+LIGG
Sbjct: 70  DKKRRFDAEFKEGGQRNWIQVLANSGIASVLVLAVGRLAGWEDKCLDGKESAVITSLIGG 129

Query: 431 IIGHYSCSNGDTWSSEIGILSDAQPRLITTFKPVRRGTNGGVTKXXXXXXXXXXXXXXXT 610
           IIG YSC NGDTWSSE+G+LSDAQPRLITTFKPVRRG NGGVT                 
Sbjct: 130 IIGQYSCCNGDTWSSELGVLSDAQPRLITTFKPVRRGANGGVTLAGLLAAAAAGGVIGLA 189

Query: 611 FALTGYLTTDCMFDKLLKQLLVIPLSTLAGLLGSVIDSLLGATLQFTGFCSIRSKIVWKP 790
           F L G+ TT C+FD  LKQLLVIP++ LAGL GS+IDSLLGATLQF+GFC++R+K+V KP
Sbjct: 190 FVLIGFFTTKCVFDVALKQLLVIPVAALAGLCGSLIDSLLGATLQFSGFCTVRNKVVGKP 249

Query: 791 APTVRKISGLHILDNNAVNLVSIFLTVMLTAFASIYIF 904
            PTVRKISGL ILDNNAVNLVSI LT +LT+    YIF
Sbjct: 250 GPTVRKISGLDILDNNAVNLVSILLTALLTSVGCAYIF 287


>ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus]
           gi|449508273|ref|XP_004163269.1| PREDICTED:
           transmembrane protein 19-like [Cucumis sativus]
          Length = 287

 Score =  353 bits (906), Expect = 4e-95
 Identities = 173/278 (62%), Positives = 215/278 (77%)
 Frame = +2

Query: 71  IAVVFSLAIAGVSYRNKSLDLSGAILGFIVTTLHLAVDYRFGAMLLVFFLTSSRLTKYGY 250
           +AV+ +  IA  +YR KSL+LSGA+ GFIV + H A++YR+GA+LLVFF TSS+LTK G 
Sbjct: 10  VAVIIASIIAFRAYRRKSLNLSGALAGFIVMSTHFAINYRYGAVLLVFFFTSSKLTKVGE 69

Query: 251 EKKRRIDPDYILGGERNWIQVLSNTGIASLLVIMFWVVTGSEDKCLNSTESMYATALIGG 430
           EKKR +D D+  GG+RNWIQV+ N+GIA++L ++ W +TG +DKCL+S +S   TALIGG
Sbjct: 70  EKKRVVDADFKEGGQRNWIQVVFNSGIATVLAVIIWKITGGQDKCLDSKDSALVTALIGG 129

Query: 431 IIGHYSCSNGDTWSSEIGILSDAQPRLITTFKPVRRGTNGGVTKXXXXXXXXXXXXXXXT 610
           I+GHYSC NGDTWSSE+GILSDA PRLIT FKPVR+GTNG VT                T
Sbjct: 130 ILGHYSCCNGDTWSSELGILSDATPRLITNFKPVRKGTNGAVTNAGLLAATAAGAVIGLT 189

Query: 611 FALTGYLTTDCMFDKLLKQLLVIPLSTLAGLLGSVIDSLLGATLQFTGFCSIRSKIVWKP 790
           F L G+ TT C +   LKQLLVIPL+ +AGL GSVIDSLLGAT+QF+GFC++R+K+V KP
Sbjct: 190 FVLLGFFTTKCDYGTTLKQLLVIPLAAVAGLCGSVIDSLLGATVQFSGFCTVRNKVVGKP 249

Query: 791 APTVRKISGLHILDNNAVNLVSIFLTVMLTAFASIYIF 904
            PTV+KISGL+ILDNN VNLVS+ LT MLT+ A IYIF
Sbjct: 250 GPTVKKISGLNILDNNGVNLVSVLLTTMLTSTACIYIF 287


>gb|AAM61603.1| unknown [Arabidopsis thaliana]
          Length = 288

 Score =  351 bits (901), Expect = 1e-94
 Identities = 174/281 (61%), Positives = 215/281 (76%)
 Frame = +2

Query: 62  QLLIAVVFSLAIAGVSYRNKSLDLSGAILGFIVTTLHLAVDYRFGAMLLVFFLTSSRLTK 241
           +L+ AV+ S  IA  SY+ KSLDLSG I GF+V T+H    +R+GA+LLVFFLTSS+LTK
Sbjct: 8   RLIFAVIISSLIAFRSYKRKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTK 67

Query: 242 YGYEKKRRIDPDYILGGERNWIQVLSNTGIASLLVIMFWVVTGSEDKCLNSTESMYATAL 421
            G +KKRR+D ++  GG+RNW+QVL N+GIAS+LV++   +TG +DKCL+S +S   TAL
Sbjct: 68  VGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTAL 127

Query: 422 IGGIIGHYSCSNGDTWSSEIGILSDAQPRLITTFKPVRRGTNGGVTKXXXXXXXXXXXXX 601
           IGGIIGHY+C NGDTWSSE+G+LSDAQPRLITTFKPV++GTNGGVTK             
Sbjct: 128 IGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTV 187

Query: 602 XXTFALTGYLTTDCMFDKLLKQLLVIPLSTLAGLLGSVIDSLLGATLQFTGFCSIRSKIV 781
             TF + G  T  C  D  LKQLLVIPL  LAGL GS+IDS+LGAT+QF+GFCS+R+K+V
Sbjct: 188 GLTFLIFGLFTASCASDVALKQLLVIPLFALAGLCGSLIDSILGATIQFSGFCSVRNKVV 247

Query: 782 WKPAPTVRKISGLHILDNNAVNLVSIFLTVMLTAFASIYIF 904
            KP PTV+KISG+ ILDNN VN VSI LT  LT+ AS+YIF
Sbjct: 248 GKPGPTVKKISGVDILDNNGVNFVSILLTSFLTSIASVYIF 288


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