BLASTX nr result
ID: Bupleurum21_contig00022668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00022668
(1731 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22283.3| unnamed protein product [Vitis vinifera] 595 e-167
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 595 e-167
ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2... 569 e-160
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi... 532 e-148
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi... 527 e-147
>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 595 bits (1534), Expect = e-167
Identities = 285/442 (64%), Positives = 354/442 (80%)
Frame = +3
Query: 3 VLSMRILKLSRLNKLVSALNLYKSMEVSGLRPNLHACNSLISCLLRNQMLDEALRIFEFM 182
+LS RIL LSR NK+ S L LY++ME SGL+P+ HACNSL+SCLLRN+MLD+ALR+FE M
Sbjct: 183 ILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESM 242
Query: 183 KKCEMTTGHTYSLILKAVANAQGCNAAVHIFEGLLGNSNLKKQFDAVVYNTMLSIYGKVN 362
K E TTGH+YSL+LKA+AN QG ++A+ +F L +KK FD + Y TM+SI GKVN
Sbjct: 243 KANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVN 302
Query: 363 DWVQTERIWRIMKDNDHTGTTVTYRLLVCIFVRCSQNELALDAYHEMIRNGVEPTDDVMQ 542
+W QTERIWR MK+N GT VTYRLLV +FVRC QNELA+DAY EMI+NG++P +D M+
Sbjct: 303 NWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMK 362
Query: 543 AIIGACCKEGEWEMALSVFQNMLNQGLKPSAVACNALINSLGKASKANLALQVYGTMKSL 722
AIIGAC KEG+W++ALSVFQ+MLN GLKP+ +ACNALINS+GK+ LA +VY MKSL
Sbjct: 363 AIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSL 422
Query: 723 GHIPDAYTWNAILGALYRANEHADVLQFFQRIQARKDSEINLHMYNTALMSCKRLGSWNR 902
GH PD YTWNA+LGALYRAN+HAD L F+ I+ + S++NLH+YNTALMSC++LG WNR
Sbjct: 423 GHTPDVYTWNALLGALYRANQHADALHLFESIR-EQSSQVNLHLYNTALMSCQKLGLWNR 481
Query: 903 ALQLIWQMEGSGLHISTMSYNLVIGTCEVARRPHIALQVYERMLHQNHTPDLFTQLSLIR 1082
ALQL+WQME SGL +S+ SYNLVIG CEVAR+P IALQVYE M+ Q TPD FT LSLIR
Sbjct: 482 ALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHLSLIR 541
Query: 1083 SCIWGSLWDEMEQLLNQVPPNASLYNVAIQGMFLRGKIDSAKNLYNKMQVYGFEPDGKTR 1262
SCIWGSLW E++++LN+ + SLYN AIQGM LRGKI+SAK LY +M+ G +PDGKTR
Sbjct: 542 SCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPDGKTR 601
Query: 1263 AFMLQNMRKHSVRRPRRSLTRP 1328
A MLQN++K ++R R ++ P
Sbjct: 602 ALMLQNLQKDAIRPSNRRISHP 623
Score = 75.5 bits (184), Expect = 4e-11
Identities = 52/251 (20%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Frame = +3
Query: 519 EPTDDVMQAIIGACCKEGEWEMALSVFQNMLNQGLKPSAVACNALINSLGKASKANLALQ 698
E + ++ I + + L +++ M GL+PS+ ACN+L++ L + + AL+
Sbjct: 178 ERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALR 237
Query: 699 VYGTMKSLGHIPDAYTWNAILGALYRANEHADVLQFFQR--IQARKDSEINLHMYNTALM 872
V+ +MK+ ++++ +L A+ + L+ F + ++ + + ++ Y T +
Sbjct: 238 VFESMKA-NESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMIS 296
Query: 873 SCKRLGSWNRALQLIWQMEGSGLHISTMSYNLVIGTCEVARRPHIALQVYERMLHQNHTP 1052
C ++ +W + ++ M+ +GL + ++Y L++ + +A+ Y M+ P
Sbjct: 297 ICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKP 356
Query: 1053 DLFTQLSLIRSCIWGSLWD----EMEQLLN-QVPPNASLYNVAIQGMFLRGKIDSAKNLY 1217
++I +C WD + +LN + PN N I + G + A +Y
Sbjct: 357 GEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVY 416
Query: 1218 NKMQVYGFEPD 1250
+ M+ G PD
Sbjct: 417 DVMKSLGHTPD 427
>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Vitis vinifera]
Length = 546
Score = 595 bits (1534), Expect = e-167
Identities = 285/442 (64%), Positives = 354/442 (80%)
Frame = +3
Query: 3 VLSMRILKLSRLNKLVSALNLYKSMEVSGLRPNLHACNSLISCLLRNQMLDEALRIFEFM 182
+LS RIL LSR NK+ S L LY++ME SGL+P+ HACNSL+SCLLRN+MLD+ALR+FE M
Sbjct: 103 ILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVFESM 162
Query: 183 KKCEMTTGHTYSLILKAVANAQGCNAAVHIFEGLLGNSNLKKQFDAVVYNTMLSIYGKVN 362
K E TTGH+YSL+LKA+AN QG ++A+ +F L +KK FD + Y TM+SI GKVN
Sbjct: 163 KANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICGKVN 222
Query: 363 DWVQTERIWRIMKDNDHTGTTVTYRLLVCIFVRCSQNELALDAYHEMIRNGVEPTDDVMQ 542
+W QTERIWR MK+N GT VTYRLLV +FVRC QNELA+DAY EMI+NG++P +D M+
Sbjct: 223 NWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMK 282
Query: 543 AIIGACCKEGEWEMALSVFQNMLNQGLKPSAVACNALINSLGKASKANLALQVYGTMKSL 722
AIIGAC KEG+W++ALSVFQ+MLN GLKP+ +ACNALINS+GK+ LA +VY MKSL
Sbjct: 283 AIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSL 342
Query: 723 GHIPDAYTWNAILGALYRANEHADVLQFFQRIQARKDSEINLHMYNTALMSCKRLGSWNR 902
GH PD YTWNA+LGALYRAN+HAD L F+ I+ + S++NLH+YNTALMSC++LG WNR
Sbjct: 343 GHTPDVYTWNALLGALYRANQHADALHLFESIR-EQSSQVNLHLYNTALMSCQKLGLWNR 401
Query: 903 ALQLIWQMEGSGLHISTMSYNLVIGTCEVARRPHIALQVYERMLHQNHTPDLFTQLSLIR 1082
ALQL+WQME SGL +S+ SYNLVIG CEVAR+P IALQVYE M+ Q TPD FT LSLIR
Sbjct: 402 ALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDTFTHLSLIR 461
Query: 1083 SCIWGSLWDEMEQLLNQVPPNASLYNVAIQGMFLRGKIDSAKNLYNKMQVYGFEPDGKTR 1262
SCIWGSLW E++++LN+ + SLYN AIQGM LRGKI+SAK LY +M+ G +PDGKTR
Sbjct: 462 SCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRMRKSGLKPDGKTR 521
Query: 1263 AFMLQNMRKHSVRRPRRSLTRP 1328
A MLQN++K ++R R ++ P
Sbjct: 522 ALMLQNLQKDAIRPSNRRISHP 543
Score = 75.5 bits (184), Expect = 4e-11
Identities = 52/251 (20%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Frame = +3
Query: 519 EPTDDVMQAIIGACCKEGEWEMALSVFQNMLNQGLKPSAVACNALINSLGKASKANLALQ 698
E + ++ I + + L +++ M GL+PS+ ACN+L++ L + + AL+
Sbjct: 98 ERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALR 157
Query: 699 VYGTMKSLGHIPDAYTWNAILGALYRANEHADVLQFFQR--IQARKDSEINLHMYNTALM 872
V+ +MK+ ++++ +L A+ + L+ F + ++ + + ++ Y T +
Sbjct: 158 VFESMKA-NESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMIS 216
Query: 873 SCKRLGSWNRALQLIWQMEGSGLHISTMSYNLVIGTCEVARRPHIALQVYERMLHQNHTP 1052
C ++ +W + ++ M+ +GL + ++Y L++ + +A+ Y M+ P
Sbjct: 217 ICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKP 276
Query: 1053 DLFTQLSLIRSCIWGSLWD----EMEQLLN-QVPPNASLYNVAIQGMFLRGKIDSAKNLY 1217
++I +C WD + +LN + PN N I + G + A +Y
Sbjct: 277 GEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVY 336
Query: 1218 NKMQVYGFEPD 1250
+ M+ G PD
Sbjct: 337 DVMKSLGHTPD 347
>ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1|
predicted protein [Populus trichocarpa]
Length = 487
Score = 569 bits (1467), Expect = e-160
Identities = 271/440 (61%), Positives = 346/440 (78%)
Frame = +3
Query: 6 LSMRILKLSRLNKLVSALNLYKSMEVSGLRPNLHACNSLISCLLRNQMLDEALRIFEFMK 185
LS RIL LSR NK+ SAL L +SME SGL+PN HACNSL+SCL+R+++ ++ALR+FE+MK
Sbjct: 50 LSRRILMLSRSNKIRSALQLLRSMEFSGLQPNTHACNSLLSCLIRHELHEDALRVFEYMK 109
Query: 186 KCEMTTGHTYSLILKAVANAQGCNAAVHIFEGLLGNSNLKKQFDAVVYNTMLSIYGKVND 365
K E+TTGH YSLILKAVA+ +GC++A+ +F L S KK FD +VYNTM+S+ GK +
Sbjct: 110 KNEITTGHAYSLILKAVASTKGCDSALDMFTELEAFSREKKDFDVIVYNTMISVCGKEKN 169
Query: 366 WVQTERIWRIMKDNDHTGTTVTYRLLVCIFVRCSQNELALDAYHEMIRNGVEPTDDVMQA 545
WV+TERIWR MK+ND+ GT VTY LLV IFVRC +NELAL+AY EM++NG++P +D + A
Sbjct: 170 WVETERIWRSMKENDYHGTQVTYSLLVSIFVRCGRNELALEAYSEMVQNGLKPREDTLHA 229
Query: 546 IIGACCKEGEWEMALSVFQNMLNQGLKPSAVACNALINSLGKASKANLALQVYGTMKSLG 725
+IGAC K+G W++AL++FQNML+ GLKP+ +ACNALIN LGKA + LA +V+ +KSLG
Sbjct: 230 VIGACSKKGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGEIKLAFKVFKILKSLG 289
Query: 726 HIPDAYTWNAILGALYRANEHADVLQFFQRIQARKDSEINLHMYNTALMSCKRLGSWNRA 905
H PD YTWNA+L LYRAN+H D LQ F+R++ ++S +N H+YNTALMSC++LG W+RA
Sbjct: 290 HTPDEYTWNALLSGLYRANQHVDALQLFERLKREQNSLLNEHLYNTALMSCQKLGLWDRA 349
Query: 906 LQLIWQMEGSGLHISTMSYNLVIGTCEVARRPHIALQVYERMLHQNHTPDLFTQLSLIRS 1085
LQL+WQ E SGL +ST SYNL IG CEVAR+P +AL+VYE M+HQ PD FT LSLIRS
Sbjct: 350 LQLVWQAEASGLSVSTASYNLAIGACEVARKPEVALEVYEHMVHQKCPPDTFTYLSLIRS 409
Query: 1086 CIWGSLWDEMEQLLNQVPPNASLYNVAIQGMFLRGKIDSAKNLYNKMQVYGFEPDGKTRA 1265
CIW SLWDE+E++L+QV P+ SLYN I GM LRGK +SAK LY KM G +PDG A
Sbjct: 410 CIWASLWDEVEEILDQVAPDVSLYNAVIHGMCLRGKTESAKKLYMKMGKSGLKPDG---A 466
Query: 1266 FMLQNMRKHSVRRPRRSLTR 1325
MLQN+RK+S +R R S R
Sbjct: 467 LMLQNLRKNSTKRSRFSTCR 486
>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 532 bits (1371), Expect = e-148
Identities = 261/437 (59%), Positives = 335/437 (76%)
Frame = +3
Query: 3 VLSMRILKLSRLNKLVSALNLYKSMEVSGLRPNLHACNSLISCLLRNQMLDEALRIFEFM 182
+LS RIL LSR NK+ SAL L +SM+++GL P+LHA NSL++CLLRN++ + LRIFEFM
Sbjct: 151 MLSKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFM 210
Query: 183 KKCEMTTGHTYSLILKAVANAQGCNAAVHIFEGLLGNSNLKKQFDAVVYNTMLSIYGKVN 362
K E++TGHTYSL+LKAVANA G +A+ +F+ L QFDA+VYNTM+SI GK N
Sbjct: 211 KLNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEHQCVLA-QFDAIVYNTMISICGKDN 269
Query: 363 DWVQTERIWRIMKDNDHTGTTVTYRLLVCIFVRCSQNELALDAYHEMIRNGVEPTDDVMQ 542
+WV+ ER WR+M+ N + T +TY LLV FVRC+QNELA+D Y +M++N +P +D MQ
Sbjct: 270 NWVEAERTWRLMEKNGCSATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQ 329
Query: 543 AIIGACCKEGEWEMALSVFQNMLNQGLKPSAVACNALINSLGKASKANLALQVYGTMKSL 722
AIIGA KEG+W+ AL VFQ+ML GL+P++V+ NALIN+LGKA + LA VY MKS+
Sbjct: 330 AIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSM 389
Query: 723 GHIPDAYTWNAILGALYRANEHADVLQFFQRIQARKDSEINLHMYNTALMSCKRLGSWNR 902
GH PD YTWNA+LGALY+AN ++D + F+ ++ R+ ++N+H+YNT LMSC +LG W R
Sbjct: 390 GHSPDVYTWNALLGALYKANRYSDAIHLFEFVK-REKVQLNIHIYNTILMSCSKLGLWER 448
Query: 903 ALQLIWQMEGSGLHISTMSYNLVIGTCEVARRPHIALQVYERMLHQNHTPDLFTQLSLIR 1082
A+Q++W+ME SGL IST SYN+V+ CE+AR+P IALQVYERM+HQ HTPD FT LSLIR
Sbjct: 449 AVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDTFTHLSLIR 508
Query: 1083 SCIWGSLWDEMEQLLNQVPPNASLYNVAIQGMFLRGKIDSAKNLYNKMQVYGFEPDGKTR 1262
CIWGSLWDE+E LLN+ P+ S+YNV IQGM LRGK D AK LY KM+ G +PDGKTR
Sbjct: 509 CCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTR 568
Query: 1263 AFMLQNMRKHSVRRPRR 1313
A MLQN+ K RR R
Sbjct: 569 ALMLQNLPKDPARRKNR 585
>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 527 bits (1357), Expect = e-147
Identities = 260/437 (59%), Positives = 333/437 (76%)
Frame = +3
Query: 3 VLSMRILKLSRLNKLVSALNLYKSMEVSGLRPNLHACNSLISCLLRNQMLDEALRIFEFM 182
+LS RIL LSR NK+ SAL L +SM+++GL P+LHA NSL++CLLRN++ + LRIFEFM
Sbjct: 151 MLSKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFM 210
Query: 183 KKCEMTTGHTYSLILKAVANAQGCNAAVHIFEGLLGNSNLKKQFDAVVYNTMLSIYGKVN 362
K E++TGHTYSL+LKAVANA G +A+ +F+ L QFDA+VYNTM+SI GK N
Sbjct: 211 KLNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEHQCVLA-QFDAIVYNTMISICGKDN 269
Query: 363 DWVQTERIWRIMKDNDHTGTTVTYRLLVCIFVRCSQNELALDAYHEMIRNGVEPTDDVMQ 542
+WV+ ER WR+M+ N T +TY LLV FVRC+QNELA+D Y +M++N +P +D MQ
Sbjct: 270 NWVEAERTWRLMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQ 329
Query: 543 AIIGACCKEGEWEMALSVFQNMLNQGLKPSAVACNALINSLGKASKANLALQVYGTMKSL 722
AIIGA KEG+W+ AL VFQ+ML GL+P++V+ NALIN+LGKA + LA VY MKS+
Sbjct: 330 AIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSM 389
Query: 723 GHIPDAYTWNAILGALYRANEHADVLQFFQRIQARKDSEINLHMYNTALMSCKRLGSWNR 902
GH PD YTWNA+LGALY+AN ++D + F+ ++ R+ ++N+H+YNT LMSC +LG W R
Sbjct: 390 GHSPDVYTWNALLGALYKANRYSDAIHLFEFVK-REKVQLNIHIYNTILMSCSKLGLWER 448
Query: 903 ALQLIWQMEGSGLHISTMSYNLVIGTCEVARRPHIALQVYERMLHQNHTPDLFTQLSLIR 1082
A+Q++W+ME SGL IST SYN+V+ CE+AR+P IALQVYERM+HQ TPD FT LSLIR
Sbjct: 449 AVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHLSLIR 508
Query: 1083 SCIWGSLWDEMEQLLNQVPPNASLYNVAIQGMFLRGKIDSAKNLYNKMQVYGFEPDGKTR 1262
CIWGSLWDE+E LLN+ P+ S+YNV IQGM LRGK D AK LY KM+ G +PDGKTR
Sbjct: 509 CCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTR 568
Query: 1263 AFMLQNMRKHSVRRPRR 1313
A MLQN+ K RR R
Sbjct: 569 ALMLQNLPKDPARRKNR 585