BLASTX nr result

ID: Bupleurum21_contig00022660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022660
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32017.3| unnamed protein product [Vitis vinifera]              100   4e-19
ref|XP_002312786.1| porin/voltage-dependent anion-selective chan...   100   4e-19
ref|XP_002282471.1| PREDICTED: mitochondrial outer membrane prot...   100   5e-19
ref|XP_003631280.1| PREDICTED: mitochondrial outer membrane prot...    99   1e-18
dbj|BAF95070.1| voltage-dependent anion channel [Nicotiana tabacum]    99   1e-18

>emb|CBI32017.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  100 bits (250), Expect = 4e-19
 Identities = 53/99 (53%), Positives = 63/99 (63%)
 Frame = +1

Query: 109 SLGTDVSIDTKTGSLTKCDAGFRFCYTDHTISLTLNDKGDSLCASYHQTIDTSIEYAVCA 288
           SLGTD+S DT TG+ TKC+AG  F   D   +LTLNDKGD+L ASY+ T+      AV A
Sbjct: 141 SLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGDTLNASYYHTVSPLTNTAVGA 200

Query: 289 ELTHKFSTNKNVLAFGFPHPMGTRTMVKARVYTCGKVLG 405
           EL+H FSTN+N L  G  H +   T VKAR    GKV G
Sbjct: 201 ELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKVSG 239


>ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118481103|gb|ABK92505.1| unknown
           [Populus trichocarpa] gi|222852606|gb|EEE90153.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  100 bits (250), Expect = 4e-19
 Identities = 50/97 (51%), Positives = 65/97 (67%)
 Frame = +1

Query: 109 SLGTDVSIDTKTGSLTKCDAGFRFCYTDHTISLTLNDKGDSLCASYHQTIDTSIEYAVCA 288
           +LGTD+S DT TG+ TKC+AG  +  +D   SLT+NDKGD+L ASY+ T+      AV A
Sbjct: 141 ALGTDLSFDTATGNFTKCNAGLSYTNSDLIASLTVNDKGDTLSASYYHTVSPLTSTAVGA 200

Query: 289 ELTHKFSTNKNVLAFGFPHPMGTRTMVKARVYTCGKV 399
           ELTH FS+N+N+L  G  H +   T VKAR+   GKV
Sbjct: 201 ELTHSFSSNENILTIGTQHALDPLTTVKARLNNYGKV 237


>ref|XP_002282471.1| PREDICTED: mitochondrial outer membrane protein porin of 34 kDa
           [Vitis vinifera] gi|147769857|emb|CAN61274.1|
           hypothetical protein VITISV_039065 [Vitis vinifera]
           gi|296082856|emb|CBI22157.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score =  100 bits (249), Expect = 5e-19
 Identities = 50/96 (52%), Positives = 64/96 (66%)
 Frame = +1

Query: 109 SLGTDVSIDTKTGSLTKCDAGFRFCYTDHTISLTLNDKGDSLCASYHQTIDTSIEYAVCA 288
           +LGTD+S DTK+G+ TKC+AG  FC  D   SLT+NDKGD++ ASY  +++     AV A
Sbjct: 141 ALGTDLSFDTKSGNFTKCNAGVSFCNADLIASLTVNDKGDAVNASYFHSVNLLTNTAVGA 200

Query: 289 ELTHKFSTNKNVLAFGFPHPMGTRTMVKARVYTCGK 396
           E+TH FSTN+N L  G  H +   T VKARV   GK
Sbjct: 201 EVTHSFSTNQNTLTLGAQHKLDPLTTVKARVNNFGK 236


>ref|XP_003631280.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 2 [Vitis vinifera]
          Length = 247

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 52/97 (53%), Positives = 62/97 (63%)
 Frame = +1

Query: 109 SLGTDVSIDTKTGSLTKCDAGFRFCYTDHTISLTLNDKGDSLCASYHQTIDTSIEYAVCA 288
           SLGTD+S DT TG+ TKC+AG  F   D   +LTLNDKGD+L ASY+ T+      AV A
Sbjct: 112 SLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGDTLNASYYHTVSPLTNTAVGA 171

Query: 289 ELTHKFSTNKNVLAFGFPHPMGTRTMVKARVYTCGKV 399
           EL+H FSTN+N L  G  H +   T VKAR    GKV
Sbjct: 172 ELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKV 208


>dbj|BAF95070.1| voltage-dependent anion channel [Nicotiana tabacum]
          Length = 276

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 50/96 (52%), Positives = 62/96 (64%)
 Frame = +1

Query: 109 SLGTDVSIDTKTGSLTKCDAGFRFCYTDHTISLTLNDKGDSLCASYHQTIDTSIEYAVCA 288
           SLGTD+S DTK G++TKC+AG  F  TD   SL LNDKGD+L ASY+  +      AV A
Sbjct: 141 SLGTDLSFDTKVGAITKCNAGLSFTNTDLIASLNLNDKGDALSASYYHIVSPLTMTAVSA 200

Query: 289 ELTHKFSTNKNVLAFGFPHPMGTRTMVKARVYTCGK 396
           E+TH F TN+N ++ G  H +   T VKARV   GK
Sbjct: 201 EVTHSFCTNENTISVGTQHQLDPLTTVKARVNNLGK 236


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