BLASTX nr result

ID: Bupleurum21_contig00022658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022658
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   263   2e-68
ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   261   4e-68
ref|XP_002308898.1| condensin complex components subunit [Populu...   256   1e-66
ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like ...   240   1e-61
ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like,...   238   6e-61

>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score =  263 bits (671), Expect = 2e-68
 Identities = 137/181 (75%), Positives = 155/181 (85%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540  ISSFEATLEQYKKKLKELVPDPMSESVLDGLSLDNDASNGDGEVDDSNAVAKPKQQQDSL 361
            I+SFEATLEQYKKKL EL PD  +++  DGL  DNDAS+G  EVD+ NA    ++QQ+SL
Sbjct: 462  IASFEATLEQYKKKLNELEPDESAQNARDGLKSDNDASDGGDEVDNVNAEEVAEKQQESL 521

Query: 360  TDSCLPEVDNDIVQ-DNVVPDVGNMEQTRTLVASLEAGLCFSKCISATMSTLVQLMASSS 184
            TDSCLP +++ I Q D+ VPDVGN+EQTR LVASLEAGL FSKCISATM TLVQLMASSS
Sbjct: 522  TDSCLPHLEDGITQKDSSVPDVGNLEQTRALVASLEAGLRFSKCISATMPTLVQLMASSS 581

Query: 183  ATDVENTILLLMRCKQFQIDGSEACLRKMLPLVFSQDKSIYEAVENAFVTIYLRKNPVET 4
            ATDVENTILLLMRC+QFQIDG+E CLRKMLPLVFSQDKSIYEAVENAF+ IY+RK PVET
Sbjct: 582  ATDVENTILLLMRCRQFQIDGAEECLRKMLPLVFSQDKSIYEAVENAFIAIYVRKLPVET 641

Query: 3    A 1
            A
Sbjct: 642  A 642


>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  261 bits (668), Expect = 4e-68
 Identities = 141/184 (76%), Positives = 151/184 (82%), Gaps = 4/184 (2%)
 Frame = -3

Query: 540  ISSFEATLEQYKKKLKELVPDPMSESVLDGLSLDNDASNGDGEVDDSNAVAK---PKQQQ 370
            I+SFEATLEQYKKKL EL P+  SESVLDGL  D D  NGDGEVD  N        K QQ
Sbjct: 450  IASFEATLEQYKKKLNELQPNLASESVLDGLPSDGDTCNGDGEVDSGNEEEVGQVAKGQQ 509

Query: 369  DSLTDSCLPEVDNDIVQ-DNVVPDVGNMEQTRTLVASLEAGLCFSKCISATMSTLVQLMA 193
            DSLTDSCLP     IV+ D+ VPDVGN+EQTR LVASLEAGL FSKC+SATM TLVQLMA
Sbjct: 510  DSLTDSCLPHTAEGIVENDSPVPDVGNLEQTRALVASLEAGLRFSKCVSATMPTLVQLMA 569

Query: 192  SSSATDVENTILLLMRCKQFQIDGSEACLRKMLPLVFSQDKSIYEAVENAFVTIYLRKNP 13
            SSSATDVENTILLLMRCKQFQ+DGSEACLRKM PLVFSQDKS YEAVENAFVTIY+RK+ 
Sbjct: 570  SSSATDVENTILLLMRCKQFQVDGSEACLRKMFPLVFSQDKSTYEAVENAFVTIYIRKSS 629

Query: 12   VETA 1
            +ETA
Sbjct: 630  META 633


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
           gi|222854874|gb|EEE92421.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1334

 Score =  256 bits (655), Expect = 1e-66
 Identities = 136/181 (75%), Positives = 155/181 (85%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540 ISSFEATLEQYKKKLKELVPDPMSESVLDGLSLDNDASNGDGEVDDSNAVAKPKQQQDSL 361
           I+SF+ATLEQY KKL EL PD  +ESVLDGL  DN+  +G GEVDD N     K+QQ+SL
Sbjct: 458 IASFQATLEQYNKKLNELEPDKSAESVLDGLQSDNETYDG-GEVDDVNMEEPVKEQQESL 516

Query: 360 TDSCLPEVDNDIVQ-DNVVPDVGNMEQTRTLVASLEAGLCFSKCISATMSTLVQLMASSS 184
           TDS +P ++  I Q D+ VPD+GN+EQTR LVASLEAGL FSKC+SATM TLVQLMASSS
Sbjct: 517 TDS-VPNLEEGIPQKDSSVPDIGNLEQTRALVASLEAGLIFSKCVSATMPTLVQLMASSS 575

Query: 183 ATDVENTILLLMRCKQFQIDGSEACLRKMLPLVFSQDKSIYEAVENAFVTIYLRKNPVET 4
           ATDVENTILLLMRCKQFQIDG+EACLRKMLPLVFSQDKSIYEAVENAF+TIY+RKNP++T
Sbjct: 576 ATDVENTILLLMRCKQFQIDGAEACLRKMLPLVFSQDKSIYEAVENAFITIYVRKNPLDT 635

Query: 3   A 1
           A
Sbjct: 636 A 636


>ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like [Glycine max]
          Length = 1316

 Score =  240 bits (612), Expect = 1e-61
 Identities = 134/182 (73%), Positives = 147/182 (80%), Gaps = 2/182 (1%)
 Frame = -3

Query: 540 ISSFEATLEQYKKKLKELVPDPMSESVLDGLSLDNDASNGDGEVDDSNAVAKPKQQQ-DS 364
           I+SFEATL+QYKKKLKEL P   +E      S D D  NGDGEVDD N     K QQ DS
Sbjct: 445 IASFEATLDQYKKKLKELEPSEGAEP-----SSDTDIYNGDGEVDDLNCENVVKGQQLDS 499

Query: 363 LTDSCLPEVDNDI-VQDNVVPDVGNMEQTRTLVASLEAGLCFSKCISATMSTLVQLMASS 187
           LTDSCL + +  I +Q++ VPDVGN+EQTR LVASLEAGL FSKCI ATM TLVQLMASS
Sbjct: 500 LTDSCLSQSEEAIPLQNSSVPDVGNLEQTRALVASLEAGLRFSKCIGATMPTLVQLMASS 559

Query: 186 SATDVENTILLLMRCKQFQIDGSEACLRKMLPLVFSQDKSIYEAVENAFVTIYLRKNPVE 7
           SATDVENTILLLMRCKQFQID SE CLRKMLPLVFSQDKSIYEAVE+AF TIY+RK+P+E
Sbjct: 560 SATDVENTILLLMRCKQFQIDDSEECLRKMLPLVFSQDKSIYEAVESAFHTIYIRKSPIE 619

Query: 6   TA 1
           TA
Sbjct: 620 TA 621


>ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like, partial [Cucumis
           sativus]
          Length = 1133

 Score =  238 bits (606), Expect = 6e-61
 Identities = 126/181 (69%), Positives = 143/181 (79%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540 ISSFEATLEQYKKKLKELVPDPMSESVLDGLSLDNDASNGDGEVDDSNAVAKPKQQQDSL 361
           + SFEATLEQYKKKL EL P+  SE+V  G   D D  NGDGEVD+ +   +   +QDSL
Sbjct: 451 VVSFEATLEQYKKKLDELEPNKSSENVDGGSPFDGDIFNGDGEVDNGHIKGEGGNRQDSL 510

Query: 360 TDSCLPEVDNDIVQ-DNVVPDVGNMEQTRTLVASLEAGLCFSKCISATMSTLVQLMASSS 184
           TDS  P+++ ++VQ DN+  DVGN EQ R LVASLEAGL FS CIS  M  LVQLMASSS
Sbjct: 511 TDSYPPQMEEEVVQKDNLTLDVGNTEQIRALVASLEAGLRFSTCISEAMPILVQLMASSS 570

Query: 183 ATDVENTILLLMRCKQFQIDGSEACLRKMLPLVFSQDKSIYEAVENAFVTIYLRKNPVET 4
           ATDVENTILLLMRC+QFQIDGSEACLRKMLPL FSQDKSIYEAVENAF+TIY+ KN +ET
Sbjct: 571 ATDVENTILLLMRCRQFQIDGSEACLRKMLPLAFSQDKSIYEAVENAFITIYITKNQIET 630

Query: 3   A 1
           A
Sbjct: 631 A 631


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