BLASTX nr result

ID: Bupleurum21_contig00022653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022653
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]      60   3e-07
gb|AAC02203.1| resistance protein candidate [Lactuca sativa]           59   1e-06
ref|XP_002307025.1| cc-nbs-lrr resistance protein [Populus trich...    58   1e-06
ref|XP_002307026.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|AAD03672.1| resistance protein candidate RGC2K [Lactuca sativa]     56   6e-06

>gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]
          Length = 1923

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 49/206 (23%), Positives = 91/206 (44%)
 Frame = +1

Query: 7    CPIYPELTKLIRLTNLQIYQSDTSSFPEEDIWQNLKRYTVSLGENFQQGELVSSSKSLKF 186
            C    EL+K +     + ++ +    P+   ++ L+R+ +S+G   +   L+SSS S + 
Sbjct: 675  CNEMAELSKNLFALEFEFFEINAQ--PKNMSFEKLERFKISMGSELRVDHLISSSHSFEN 732

Query: 187  CYGSLEDDGVKNLVHRXXXXXXXXXXXXXXECFRIKSGVEFEEITRLKVIACYKVKYLGK 366
                +   G                     E    K    F++ T +  ++   +  L  
Sbjct: 733  TLRLVTKKG---------------------ELLESKMNELFQK-TDVLYLSVGDMNDLED 770

Query: 367  ISHWRLNKVALQSFSKLSVLDMSLGTEFEYIFSTSIARGLQQLQELRIFECVNLEEIVRD 546
            I    L+     SF  L VL +S   E  Y+F+ S+ R L +L+ LR+  C N+EE++  
Sbjct: 771  IEVKSLHPPQSSSFYNLRVLVVSRCAELRYLFTVSVVRALSKLEHLRVSYCKNMEELIHT 830

Query: 547  EGDEDRKTIIAFPKLRYIDFYSMPKV 624
             G  + K  I FPKL+++  +++ K+
Sbjct: 831  GGKGEEK--ITFPKLKFLYLHTLSKL 854


>gb|AAC02203.1| resistance protein candidate [Lactuca sativa]
          Length = 1139

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 26/74 (35%), Positives = 47/74 (63%)
 Frame = +1

Query: 403 SFSKLSVLDMSLGTEFEYIFSTSIARGLQQLQELRIFECVNLEEIVRDEGDEDRKTIIAF 582
           SF+ L VL +S   E ++ F+  +A  L++L+ L +++C N+EE++R  G E+    I F
Sbjct: 777 SFNNLRVLVVSKCAELKHFFTPGVANTLKKLEHLEVYKCDNMEELIRSRGSEEE--TITF 834

Query: 583 PKLRYIDFYSMPKV 624
           PKL+++    +PK+
Sbjct: 835 PKLKFLSLCGLPKL 848


>ref|XP_002307025.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222856474|gb|EEE94021.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1144

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
 Frame = +1

Query: 22   ELTKLIRLTNLQIYQSDTSSFPEEDIWQNLKRYTVSLGENFQQGELVSSSKSLKFCYGS- 198
            EL  L  LTN+ I+  D+    +  + + L+R+ + +G+ +    +  S ++LK    + 
Sbjct: 670  ELDHLPHLTNVDIHVLDSHVMSKGMLSKRLERFRIFIGDVWDWDGVYQSLRTLKLKLNTS 729

Query: 199  --------------------LEDDGVKNLVHRXXXXXXXXXXXXXXEC-----FRIKSGV 303
                                LE  GV N+V                       + I +  
Sbjct: 730  ASNLEHGVLMLLKRTQDLYLLELKGVNNVVSELDTEGFLQLRHLHLHNSSDIQYIINTSS 789

Query: 304  EFEE--ITRLKVIACYKVKYLGKISHWRLNKVALQSFSKLSVLDMSLGTEFEYIFSTSIA 477
            EF       L+ +  Y +  L K+ H  L     +SF KL+++++    + +++F  S+A
Sbjct: 790  EFPSHVFPVLESLFLYNLVSLEKLCHGILTA---ESFRKLTIIEVGNCVKLKHLFPFSVA 846

Query: 478  RGLQQLQELRIFECVNLEEIVRDEGDEDRKT-----IIAFPKLRYIDFYSMPKVRS 630
            RGL QLQ + I  C+ +EE+V +EGDE   +     ++ F +L  +    +P +++
Sbjct: 847  RGLSQLQTINISFCLTMEEVVAEEGDEFEDSCTEIDVMEFNQLSSLSLQCLPHLKN 902


>ref|XP_002307026.1| predicted protein [Populus trichocarpa] gi|222856475|gb|EEE94022.1|
           predicted protein [Populus trichocarpa]
          Length = 758

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
 Frame = +1

Query: 325 LKVIACYKVKYLGKISHWRLNKVALQSFSKLSVLDMSLGTEFEYIFSTSIARGLQQLQEL 504
           L+ +  Y +  L K+ H  L     +SF KL+++++    + +++F  SIARGL QLQ +
Sbjct: 201 LESLFLYNLVSLEKLCHGILTA---ESFRKLTIIEVGNCVKLKHLFPFSIARGLSQLQTI 257

Query: 505 RIFECVNLEEIVRDEGD--EDRKT---IIAFPKLRYIDFYSMPKVRS 630
            I  C+ +EEIV +EGD  ED  T   ++ F +L  +    +P +++
Sbjct: 258 NISSCLTMEEIVAEEGDEFEDSHTAIDVMEFNQLSSLSLRCLPHLKN 304


>gb|AAD03672.1| resistance protein candidate RGC2K [Lactuca sativa]
          Length = 1715

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/74 (36%), Positives = 44/74 (59%)
 Frame = +1

Query: 403 SFSKLSVLDMSLGTEFEYIFSTSIARGLQQLQELRIFECVNLEEIVRDEGDEDRKTIIAF 582
           SF  L VL +S   E  Y+F+  +A  L +L+ L+++EC N+EEI+  EG  +    I F
Sbjct: 777 SFHNLRVLIISECIELRYLFTLDVANTLSKLEHLQVYECDNMEEIIHTEGRGE--VTITF 834

Query: 583 PKLRYIDFYSMPKV 624
           PKL+++    +P +
Sbjct: 835 PKLKFLSLCGLPNL 848


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