BLASTX nr result

ID: Bupleurum21_contig00022636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022636
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus tric...   155   6e-36
ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vi...   152   3e-35
emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]   152   3e-35
ref|XP_002524855.1| ATP binding protein, putative [Ricinus commu...   152   4e-35
ref|XP_002325741.1| tir-nbs-lrr resistance protein [Populus tric...   150   1e-34

>ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859512|gb|EEE97059.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 937

 Score =  155 bits (391), Expect = 6e-36
 Identities = 76/130 (58%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 YDVFLSFRGPDTRKTFTGHLHAALIQAGIRTFLDDKELETGKRISADLPTAIEQSKISIV 206
           YDVFLSFRG DTRK FT HL+ AL+QAGIRTF DD EL  G++IS+ LP AI++SK+SIV
Sbjct: 3   YDVFLSFRGEDTRKNFTDHLYTALLQAGIRTFRDDDELLRGEKISSQLPKAIQESKVSIV 62

Query: 205 VLSKTYARSRWCLDELLKIIECMDTSEHLVFPICYDVKPLDVRYQIGSFAEAFTYQASR- 29
           V SK YA S WCLDEL +I++C  T+  +V P+ YD+ P D+R Q GSFAEAF     R 
Sbjct: 63  VFSKGYASSTWCLDELEEILDCRHTTGQIVLPVFYDIGPSDIRKQTGSFAEAFDRHEERF 122

Query: 28  -EDTHKLETW 2
            E+  K++ W
Sbjct: 123 KEEMEKVQKW 132


>ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score =  152 bits (385), Expect = 3e-35
 Identities = 76/126 (60%), Positives = 93/126 (73%)
 Frame = -2

Query: 385 YDVFLSFRGPDTRKTFTGHLHAALIQAGIRTFLDDKELETGKRISADLPTAIEQSKISIV 206
           YDVFLSFRG DTR++FT HL+AAL++ G+RTF DD+ELE GK I+ +L  AIE+S+IS+V
Sbjct: 17  YDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAPELLKAIEESRISVV 76

Query: 205 VLSKTYARSRWCLDELLKIIECMDTSEHLVFPICYDVKPLDVRYQIGSFAEAFTYQASRE 26
           V SK YARS WC+DEL+KIIECM      V P+ YDV P  VR Q GSF EAF   +  E
Sbjct: 77  VFSKNYARSGWCMDELVKIIECMKAKGQTVLPVFYDVDPTHVRKQTGSFMEAFA--SHGE 134

Query: 25  DTHKLE 8
           DT  +E
Sbjct: 135 DTEVIE 140


>emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score =  152 bits (385), Expect = 3e-35
 Identities = 76/126 (60%), Positives = 93/126 (73%)
 Frame = -2

Query: 385 YDVFLSFRGPDTRKTFTGHLHAALIQAGIRTFLDDKELETGKRISADLPTAIEQSKISIV 206
           YDVFLSFRG DTR++FT HL+AAL++ G+RTF DD+ELE GK I+ +L  AIE+S+IS+V
Sbjct: 17  YDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAPELLKAIEESRISVV 76

Query: 205 VLSKTYARSRWCLDELLKIIECMDTSEHLVFPICYDVKPLDVRYQIGSFAEAFTYQASRE 26
           V SK YARS WC+DEL+KIIECM      V P+ YDV P  VR Q GSF EAF   +  E
Sbjct: 77  VFSKNYARSGWCMDELVKIIECMKAKGQTVLPVFYDVDPTHVRKQTGSFMEAFA--SHGE 134

Query: 25  DTHKLE 8
           DT  +E
Sbjct: 135 DTEVIE 140


>ref|XP_002524855.1| ATP binding protein, putative [Ricinus communis]
           gi|223535818|gb|EEF37479.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 673

 Score =  152 bits (384), Expect = 4e-35
 Identities = 75/129 (58%), Positives = 91/129 (70%)
 Frame = -2

Query: 388 TYDVFLSFRGPDTRKTFTGHLHAALIQAGIRTFLDDKELETGKRISADLPTAIEQSKISI 209
           +YDVFLSFRG DTRK FT HL+ AL+QAGI  F DDK L  G  IS++L  AI++SK+SI
Sbjct: 22  SYDVFLSFRGEDTRKNFTDHLYNALLQAGIHAFRDDKHLSRGNHISSELLKAIQESKVSI 81

Query: 208 VVLSKTYARSRWCLDELLKIIECMDTSEHLVFPICYDVKPLDVRYQIGSFAEAFTYQASR 29
           VV SK YA SRWCLDEL+KI++C +T+  +V PI YDV P DVR Q GSFAEA       
Sbjct: 82  VVFSKGYASSRWCLDELVKIMQCKNTAGQIVVPIFYDVSPSDVRKQTGSFAEALQRHEQF 141

Query: 28  EDTHKLETW 2
            +  K+  W
Sbjct: 142 SEREKVNDW 150


>ref|XP_002325741.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|224145719|ref|XP_002325742.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
           gi|222862616|gb|EEF00123.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
           gi|222862617|gb|EEF00124.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 532

 Score =  150 bits (379), Expect = 1e-34
 Identities = 77/130 (59%), Positives = 90/130 (69%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 YDVFLSFRGPDTRKTFTGHLHAALIQAGIRTFLDDKELETGKRISADLPTAIEQSKISIV 206
           YDVFLSFRG DTRK FT HL+ ALIQAGI TF DD EL  G+ IS  L  AIE S+ISIV
Sbjct: 10  YDVFLSFRGKDTRKNFTDHLYTALIQAGIHTFRDDNELPRGEEISPQLVKAIEGSRISIV 69

Query: 205 VLSKTYARSRWCLDELLKIIECMDTSEHLVFPICYDVKPLDVRYQIGSFAEAFTYQAS-- 32
           V SK YA SRWCLDEL+KI+EC    + +V PI YD +P DVR Q GS+A+AF       
Sbjct: 70  VFSKQYASSRWCLDELVKIVECRQKIDQVVLPIFYDTEPSDVRKQTGSYAKAFDEHEEHF 129

Query: 31  REDTHKLETW 2
           +E+  K+  W
Sbjct: 130 KEEMEKVNKW 139


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