BLASTX nr result

ID: Bupleurum21_contig00022633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022633
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifer...   190   9e-47
ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|2...   184   6e-45
ref|XP_002512783.1| Transportin-3, putative [Ricinus communis] g...   179   3e-43
ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]   178   5e-43
ref|XP_004145646.1| PREDICTED: LOW QUALITY PROTEIN: transportin-...   178   5e-43

>ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifera]
           gi|296082227|emb|CBI21232.3| unnamed protein product
           [Vitis vinifera]
          Length = 1015

 Score =  190 bits (483), Expect = 9e-47
 Identities = 98/114 (85%), Positives = 102/114 (89%), Gaps = 3/114 (2%)
 Frame = +1

Query: 22  MELQIKVAQAVQVLNHDSQSCNRVAANQWLVQFQHTDAAWEVATSILTSDHHL---PFVS 192
           MELQIKVAQAV VLNHDSQSCNRVAANQWLVQFQ TD AW+VATSILTSDHH     F+S
Sbjct: 1   MELQIKVAQAVHVLNHDSQSCNRVAANQWLVQFQQTDLAWDVATSILTSDHHRHHHSFLS 60

Query: 193 DFEAEFFAAQILKRKIQNEGNNLQLGAKDALLNSLFLAAKKFSSGPPQLLTQIC 354
           DFE EFFAAQILKRKIQNEG  LQLGAKDALLN+L LAAK+FSSGPPQLLTQIC
Sbjct: 61  DFEVEFFAAQILKRKIQNEGYYLQLGAKDALLNALLLAAKRFSSGPPQLLTQIC 114


>ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|222861841|gb|EEE99383.1|
           predicted protein [Populus trichocarpa]
          Length = 1008

 Score =  184 bits (467), Expect = 6e-45
 Identities = 95/119 (79%), Positives = 104/119 (87%), Gaps = 8/119 (6%)
 Frame = +1

Query: 22  MELQIKVAQAVQVLNHDSQSCNRVAANQWLVQFQHTDAAWEVATSILTSDH-HL------ 180
           M+LQ+KVAQAV VLNHD+QSCNRVAANQWLVQFQ TDA WEVATSILTSDH HL      
Sbjct: 1   MDLQMKVAQAVHVLNHDTQSCNRVAANQWLVQFQQTDAVWEVATSILTSDHLHLQQQTPP 60

Query: 181 -PFVSDFEAEFFAAQILKRKIQNEGNNLQLGAKDALLNSLFLAAKKFSSGPPQLLTQIC 354
            PFVSD E EFFAAQILKRKIQ+EG++LQLG KDALLN+L +AAK+FSSGPPQLLTQIC
Sbjct: 61  PPFVSDLEVEFFAAQILKRKIQSEGHSLQLGVKDALLNALLVAAKRFSSGPPQLLTQIC 119


>ref|XP_002512783.1| Transportin-3, putative [Ricinus communis]
           gi|223547794|gb|EEF49286.1| Transportin-3, putative
           [Ricinus communis]
          Length = 1020

 Score =  179 bits (453), Expect = 3e-43
 Identities = 90/115 (78%), Positives = 101/115 (87%), Gaps = 4/115 (3%)
 Frame = +1

Query: 22  MELQIKVAQAVQVLNHDSQSCNRVAANQWLVQFQHTDAAWEVATSILTSDH----HLPFV 189
           MELQ KVAQAV VLNHD++SCNRVAANQWLVQFQ TDAAW+VATSILTSDH    H PF 
Sbjct: 1   MELQTKVAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWQVATSILTSDHLQLHHQPFF 60

Query: 190 SDFEAEFFAAQILKRKIQNEGNNLQLGAKDALLNSLFLAAKKFSSGPPQLLTQIC 354
           SDFE EFFAAQIL+RKIQ+EG +L +GAKDALLN+L +AA++FSSGP QLLTQIC
Sbjct: 61  SDFEVEFFAAQILRRKIQSEGYHLHIGAKDALLNALLVAAQRFSSGPLQLLTQIC 115


>ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 1029

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/115 (80%), Positives = 99/115 (86%), Gaps = 4/115 (3%)
 Frame = +1

Query: 22  MELQIKVAQAVQVLNHDSQSCNRVAANQWLVQFQHTDAAWEVATSILTSDHHLP----FV 189
           MEL++KV+QAV VLNHD+QSCNRVAANQWLVQFQ T AAWEVAT+ILTSDH  P    FV
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60

Query: 190 SDFEAEFFAAQILKRKIQNEGNNLQLGAKDALLNSLFLAAKKFSSGPPQLLTQIC 354
            D E EFFAAQILKRKIQNEG  LQLG KDALLN+L +AAKKFSSGPPQLLTQIC
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQIC 115


>ref|XP_004145646.1| PREDICTED: LOW QUALITY PROTEIN: transportin-3-like [Cucumis
           sativus]
          Length = 1031

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/115 (80%), Positives = 99/115 (86%), Gaps = 4/115 (3%)
 Frame = +1

Query: 22  MELQIKVAQAVQVLNHDSQSCNRVAANQWLVQFQHTDAAWEVATSILTSDHHLP----FV 189
           MEL++KV+QAV VLNHD+QSCNRVAANQWLVQFQ T AAWEVAT+ILTSDH  P    FV
Sbjct: 1   MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDHVQPSMSSFV 60

Query: 190 SDFEAEFFAAQILKRKIQNEGNNLQLGAKDALLNSLFLAAKKFSSGPPQLLTQIC 354
            D E EFFAAQILKRKIQNEG  LQLG KDALLN+L +AAKKFSSGPPQLLTQIC
Sbjct: 61  PDLEVEFFAAQILKRKIQNEGYLLQLGVKDALLNALLVAAKKFSSGPPQLLTQIC 115


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