BLASTX nr result

ID: Bupleurum21_contig00022620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022620
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283864.1| PREDICTED: dehydration-responsive element-bi...   172   5e-41
gb|AEM63548.1| dehydration-responsive element-binding protein DR...   171   2e-40
ref|XP_002278906.1| PREDICTED: dehydration-responsive element-bi...   166   6e-39
ref|NP_197953.1| ethylene-responsive transcription factor TINY [...   164   1e-38
gb|ADE41141.1| AP2 domain class transcription factor [Malus x do...   164   2e-38

>ref|XP_002283864.1| PREDICTED: dehydration-responsive element-binding protein 3-like
           [Vitis vinifera]
          Length = 241

 Score =  172 bits (437), Expect = 5e-41
 Identities = 95/185 (51%), Positives = 117/185 (63%), Gaps = 8/185 (4%)
 Frame = +3

Query: 138 SHSKTESEKI--INSKTKQPMYRGVRMRSWGKWVSEIRQPRKKTRIWLGTYSTPEMAARA 311
           S  + ES+K+  I   +K P+YRGVRMR+WGKWVSEIR+PRKK+RIWLGT+ TPEMAARA
Sbjct: 36  SKPEPESKKMKRIRDSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARA 95

Query: 312 HDVAALTIKGGAAILNFPQLAHSLPRPASVSPRDVQ------XXXXXXXXXXXXXXXXXX 473
           HDVAAL+IKG +AILNFPQLA SLPRP S++PRDVQ                        
Sbjct: 96  HDVAALSIKGNSAILNFPQLAASLPRPVSLAPRDVQAAAAKAAAMDKFDSPSSSSSSSSL 155

Query: 474 XVLXXXXXXTSLSYEFGLGEITELPSLNGEKESTQSLSEVLLADSPDMWLYPPSWADETE 653
             L      ++ S E  L EI ELP+L+   +S +S ++ +  DS D WLYPP W    E
Sbjct: 156 SSLVSSIDLSTASDE--LSEIVELPNLDPSFDSPESKTDFVFDDSADGWLYPPPWLQSVE 213

Query: 654 ISGYF 668
             GYF
Sbjct: 214 DCGYF 218


>gb|AEM63548.1| dehydration-responsive element-binding protein DREB1 [Solanum
           tuberosum] gi|409030180|gb|AFV07577.1| AP2 c4 [Solanum
           tuberosum]
          Length = 218

 Score =  171 bits (432), Expect = 2e-40
 Identities = 96/187 (51%), Positives = 116/187 (62%), Gaps = 8/187 (4%)
 Frame = +3

Query: 132 TMSHSKTESEKIINSKTKQ---PMYRGVRMRSWGKWVSEIRQPRKKTRIWLGTYSTPEMA 302
           T    + E EK +  + +    P+YRGVRMRSWGKWVSEIRQPRKK+RIWLGTY TPEMA
Sbjct: 15  TEEPEEKEKEKRMEKRRRDESYPVYRGVRMRSWGKWVSEIRQPRKKSRIWLGTYPTPEMA 74

Query: 303 ARAHDVAALTIKGGAAILNFPQLAHSLPRPASVSPRDVQXXXXXXXXXXXXXXXXXXXVL 482
           ARAHDVAAL+IKG +AILNFPQL  SLPRPAS+SPRDVQ                     
Sbjct: 75  ARAHDVAALSIKGNSAILNFPQLVESLPRPASISPRDVQAAAAKAAAMDELNSSVSSSST 134

Query: 483 XXXXXXTSLSY----EFGLGEITELPSLNGEKESTQSLSEVLLADSPDMWLYPPSWAD-E 647
                  +++     E  LG+I ELP+L G  ES     ++ L+DS + W+YPP W + E
Sbjct: 135 LSESMEETMTVAAASEDQLGQIIELPNLEGIFES----EKMKLSDSGEGWVYPPPWGEFE 190

Query: 648 TEISGYF 668
            E  GYF
Sbjct: 191 DEFCGYF 197


>ref|XP_002278906.1| PREDICTED: dehydration-responsive element-binding protein 3-like
           [Vitis vinifera]
          Length = 235

 Score =  166 bits (419), Expect = 6e-39
 Identities = 86/164 (52%), Positives = 104/164 (63%), Gaps = 2/164 (1%)
 Frame = +3

Query: 183 KQPMYRGVRMRSWGKWVSEIRQPRKKTRIWLGTYSTPEMAARAHDVAALTIKGGAAILNF 362
           + P+YRGVRMRSWGKWVSEIR+PRKK+RIWLGT+  PEMAARAHD AAL+IKG +AILNF
Sbjct: 59  RHPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPNPEMAARAHDSAALSIKGDSAILNF 118

Query: 363 PQLAHSLPRPASVSPRDVQXXXXXXXXXXXXXXXXXXXVLXXXXXXTSL--SYEFGLGEI 536
           P LAH LPRP ++SPRDVQ                           +S   S    L +I
Sbjct: 119 PDLAHLLPRPVTLSPRDVQAAAAKAAAMETLNSTTTTTTTTSSSLSSSSEESTSDELSQI 178

Query: 537 TELPSLNGEKESTQSLSEVLLADSPDMWLYPPSWADETEISGYF 668
            ELP++ GE +S +S +E +LADS + WLYPP    E     YF
Sbjct: 179 VELPNIEGELDSDESRNEFILADSVEGWLYPPPATAEENFCAYF 222


>ref|NP_197953.1| ethylene-responsive transcription factor TINY [Arabidopsis
           thaliana] gi|48428609|sp|Q39127.1|TINY_ARATH RecName:
           Full=Ethylene-responsive transcription factor TINY
           gi|1246403|emb|CAA64359.1| TINY [Arabidopsis thaliana]
           gi|3406035|gb|AAC29139.1| TINY [Arabidopsis thaliana]
           gi|48479302|gb|AAT44922.1| putative AP2/EREBP
           transcription factor [Arabidopsis thaliana]
           gi|90568018|gb|ABD94079.1| At5g25810 [Arabidopsis
           thaliana] gi|332006107|gb|AED93490.1|
           ethylene-responsive transcription factor TINY
           [Arabidopsis thaliana]
          Length = 218

 Score =  164 bits (416), Expect = 1e-38
 Identities = 87/178 (48%), Positives = 110/178 (61%), Gaps = 11/178 (6%)
 Frame = +3

Query: 144 SKTESEKIINSKTKQPMYRGVRMRSWGKWVSEIRQPRKKTRIWLGTYSTPEMAARAHDVA 323
           ++ E +K +    K P+YRGVR R+WGKWVSEIR+PRKK+RIWLGT+ +PEMAARAHDVA
Sbjct: 19  NEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVA 78

Query: 324 ALTIKGGAAILNFPQLAHSLPRPASVSPRDVQXXXXXXXXXXXXXXXXXXXVLXXXXXXT 503
           AL+IKG +AILNFP LA S PRP+S+SPRD+Q                    L      +
Sbjct: 79  ALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQS 138

Query: 504 SLSYEF----------GLGEITELPSLNGEKES-TQSLSEVLLADSPDMWLYPPSWAD 644
           S S E            LGEI ELPSL    +  TQ  +E + +DS D+W YPP W++
Sbjct: 139 SSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSADLWPYPPQWSE 196


>gb|ADE41141.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 243

 Score =  164 bits (414), Expect = 2e-38
 Identities = 92/187 (49%), Positives = 119/187 (63%), Gaps = 10/187 (5%)
 Frame = +3

Query: 147 KTESEKIINSKTKQPMYRGVRMRSWGKWVSEIRQPRKKTRIWLGTYSTPEMAARAHDVAA 326
           K   +  +NS +K P+YRGVRMR+WGKWVSEIR+PRKK+RIWLGT+STPEMAARAHDVAA
Sbjct: 55  KRHDDSNVNS-SKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAA 113

Query: 327 LTIKGGAAILNFPQLAHSLPRPASVSPRDVQXXXXXXXXXXXXXXXXXXXVLXXXXXXTS 506
           L+IKG +AILNFP+L   LPRPAS+ P+DVQ                    L      +S
Sbjct: 114 LSIKGSSAILNFPELTELLPRPASLKPQDVQAAAIKAAAMVHLNSTTSSSSLSSSSSSSS 173

Query: 507 L-------SYEFGLGEITELPSLNGEKESTQSLSE-VLLADSPDMWLYPPSWADETEIS- 659
           L       S    LGEI ELP++ G  ES +S +E +L+ DS D W+YP    +  E++ 
Sbjct: 174 LLLSQSEGSDSEELGEIVELPNIEGSFESPESRNEFILVNDSLDAWVYPSLGLEGVELNL 233

Query: 660 -GYFPAN 677
            G+F ++
Sbjct: 234 WGFFSSD 240


Top