BLASTX nr result

ID: Bupleurum21_contig00022608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022608
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT21542.1| spermidine synthase [Panax ginseng]                    194   5e-48
gb|AFH96952.1| spermidine synthase [Eleutherococcus senticosus]       192   3e-47
ref|XP_004135237.1| PREDICTED: spermidine synthase-like [Cucumis...   190   9e-47
sp|O82147.1|SPDE_COFAR RecName: Full=Spermidine synthase; Short=...   189   2e-46
gb|AAT66041.1| spermidine synthase [Cucumis sativus]                  189   3e-46

>gb|ACT21542.1| spermidine synthase [Panax ginseng]
          Length = 333

 Score =  194 bits (494), Expect = 5e-48
 Identities = 93/98 (94%), Positives = 96/98 (97%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSKQFFP+VAVGY+DPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF
Sbjct: 158 VSKQFFPDVAVGYDDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 217

Query: 183 RSVSKALHPGGVVCTQAESIWLHMHIIEDIVTNCRQIF 296
           +SVSKAL PGGVVCTQAESIWLHMHIIEDIV NCRQIF
Sbjct: 218 QSVSKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIF 255


>gb|AFH96952.1| spermidine synthase [Eleutherococcus senticosus]
          Length = 333

 Score =  192 bits (487), Expect = 3e-47
 Identities = 92/98 (93%), Positives = 95/98 (96%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSKQFFP+VAVGYEDPRVK+HIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF
Sbjct: 158 VSKQFFPDVAVGYEDPRVKVHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 217

Query: 183 RSVSKALHPGGVVCTQAESIWLHMHIIEDIVTNCRQIF 296
             VSKAL PGGVVCTQAESIWLHMHIIEDIV+NCRQIF
Sbjct: 218 SLVSKALRPGGVVCTQAESIWLHMHIIEDIVSNCRQIF 255


>ref|XP_004135237.1| PREDICTED: spermidine synthase-like [Cucumis sativus]
           gi|449478562|ref|XP_004155353.1| PREDICTED: spermidine
           synthase-like [Cucumis sativus]
          Length = 317

 Score =  190 bits (483), Expect = 9e-47
 Identities = 89/98 (90%), Positives = 94/98 (95%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSK+FFP VA+GYEDPRV LH+GDGVAFLKAVPEGTYDA+IVDSSDPIGPAQELFEKPFF
Sbjct: 143 VSKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAIIVDSSDPIGPAQELFEKPFF 202

Query: 183 RSVSKALHPGGVVCTQAESIWLHMHIIEDIVTNCRQIF 296
            SV+KAL PGGVVCTQAESIWLHMHIIEDIVTNCRQIF
Sbjct: 203 ASVAKALRPGGVVCTQAESIWLHMHIIEDIVTNCRQIF 240


>sp|O82147.1|SPDE_COFAR RecName: Full=Spermidine synthase; Short=SPDSY; AltName:
           Full=Putrescine aminopropyltransferase
           gi|3242659|dbj|BAA29033.1| spermidine synthase [Coffea
           arabica]
          Length = 316

 Score =  189 bits (481), Expect = 2e-46
 Identities = 90/98 (91%), Positives = 94/98 (95%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSKQFFP+VAVG+EDPRV LHIGDGVAFLKAVPEGTYDA+IVDSSDPIGPAQELFEKPFF
Sbjct: 139 VSKQFFPDVAVGFEDPRVVLHIGDGVAFLKAVPEGTYDAIIVDSSDPIGPAQELFEKPFF 198

Query: 183 RSVSKALHPGGVVCTQAESIWLHMHIIEDIVTNCRQIF 296
            SV+KAL PGGVVCTQAESIWLHMHIIEDIV NCRQIF
Sbjct: 199 ESVAKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIF 236


>gb|AAT66041.1| spermidine synthase [Cucumis sativus]
          Length = 317

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/98 (89%), Positives = 93/98 (94%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSK+FFP VA+GYEDPRV LH+GDGVAFLKAVPEGTYDA+IVDSSDPIGPAQELFEKPFF
Sbjct: 143 VSKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAIIVDSSDPIGPAQELFEKPFF 202

Query: 183 RSVSKALHPGGVVCTQAESIWLHMHIIEDIVTNCRQIF 296
            SV+KAL PGGVVCTQAE IWLHMHIIEDIVTNCRQIF
Sbjct: 203 ASVAKALRPGGVVCTQAEGIWLHMHIIEDIVTNCRQIF 240


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