BLASTX nr result

ID: Bupleurum21_contig00022605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022605
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518300.1| PREDICTED: laccase-4-like [Glycine max]            54   8e-16
ref|XP_003544873.1| PREDICTED: laccase-4-like [Glycine max]            54   8e-16
ref|XP_002314124.1| predicted protein [Populus trichocarpa] gi|2...    55   1e-15
ref|XP_003551299.1| PREDICTED: laccase-4-like [Glycine max]            54   2e-15
ref|NP_565881.1| laccase-4 [Arabidopsis thaliana] gi|75318640|sp...    53   4e-15

>ref|XP_003518300.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 557

 Score = 54.3 bits (129), Expect(2) = 8e-16
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -2

Query: 84  GPTLYAREDDTVLVNVINNVSYNVTIHW 1
           GPT+YAREDDTVLV V+N+V YNV+IHW
Sbjct: 55  GPTIYAREDDTVLVKVVNHVKYNVSIHW 82



 Score = 53.9 bits (128), Expect(2) = 8e-16
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -1

Query: 181 ESVVRHYKFNVVMKNVTKLYATKPIVTVNG 92
           E++VRHYKFNVV+KNVT+L +TKPIVTVNG
Sbjct: 22  EAMVRHYKFNVVVKNVTRLCSTKPIVTVNG 51


>ref|XP_003544873.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 554

 Score = 54.3 bits (129), Expect(2) = 8e-16
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -2

Query: 84  GPTLYAREDDTVLVNVINNVSYNVTIHW 1
           GPT+YAREDDTVLV V+N+V YNV+IHW
Sbjct: 52  GPTIYAREDDTVLVKVVNHVKYNVSIHW 79



 Score = 53.9 bits (128), Expect(2) = 8e-16
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -1

Query: 181 ESVVRHYKFNVVMKNVTKLYATKPIVTVNG 92
           E++VRHYKFNVV+KNVT+L +TKPIVTVNG
Sbjct: 19  EAMVRHYKFNVVVKNVTRLCSTKPIVTVNG 48


>ref|XP_002314124.1| predicted protein [Populus trichocarpa] gi|222850532|gb|EEE88079.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 55.5 bits (132), Expect(2) = 1e-15
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -1

Query: 181 ESVVRHYKFNVVMKNVTKLYATKPIVTVNG 92
           ES+VRHYKFNVVMKN TKL +TKPIVTVNG
Sbjct: 22  ESMVRHYKFNVVMKNSTKLCSTKPIVTVNG 51



 Score = 52.0 bits (123), Expect(2) = 1e-15
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -2

Query: 84  GPTLYAREDDTVLVNVINNVSYNVTIHW 1
           GPTL AREDDTVLV V+N+V YNV+IHW
Sbjct: 55  GPTLVAREDDTVLVKVVNHVKYNVSIHW 82


>ref|XP_003551299.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 556

 Score = 54.3 bits (129), Expect(2) = 2e-15
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -2

Query: 84  GPTLYAREDDTVLVNVINNVSYNVTIHW 1
           GPT+YAREDDTVLV V+N+V YNV+IHW
Sbjct: 55  GPTIYAREDDTVLVKVVNHVKYNVSIHW 82



 Score = 52.8 bits (125), Expect(2) = 2e-15
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = -1

Query: 181 ESVVRHYKFNVVMKNVTKLYATKPIVTVNG 92
           E++VRHYKFNVV+KN T+L +TKPIVTVNG
Sbjct: 22  EAMVRHYKFNVVLKNATRLCSTKPIVTVNG 51


>ref|NP_565881.1| laccase-4 [Arabidopsis thaliana] gi|75318640|sp|O80434.2|LAC4_ARATH
           RecName: Full=Laccase-4; AltName:
           Full=Benzenediol:oxygen oxidoreductase 4; AltName:
           Full=Diphenol oxidase 4; AltName: Full=Protein IRREGULAR
           XYLEM 12; AltName: Full=Urishiol oxidase 4; Flags:
           Precursor gi|15450603|gb|AAK96573.1| At2g38080/T8P21
           [Arabidopsis thaliana] gi|17380634|gb|AAL36080.1|
           At2g38080/T8P21 [Arabidopsis thaliana]
           gi|17473886|gb|AAL38363.1| putative diphenol oxidase
           [Arabidopsis thaliana] gi|20196985|gb|AAC27158.2|
           putative diphenol oxidase [Arabidopsis thaliana]
           gi|21387103|gb|AAM47955.1| putative diphenol oxidase
           [Arabidopsis thaliana] gi|330254393|gb|AEC09487.1|
           laccase-4 [Arabidopsis thaliana]
          Length = 558

 Score = 53.1 bits (126), Expect(2) = 4e-15
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -1

Query: 181 ESVVRHYKFNVVMKNVTKLYATKPIVTVNG 92
           ES+VRHYKFNVVMKNVT+L ++KP VTVNG
Sbjct: 23  ESMVRHYKFNVVMKNVTRLCSSKPTVTVNG 52



 Score = 52.8 bits (125), Expect(2) = 4e-15
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = -2

Query: 84  GPTLYAREDDTVLVNVINNVSYNVTIHW 1
           GPT+YAREDDT+L+ V+N+V YNV+IHW
Sbjct: 56  GPTIYAREDDTLLIKVVNHVKYNVSIHW 83


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