BLASTX nr result

ID: Bupleurum21_contig00022584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022584
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002284367.1| PREDICTED: uncharacterized protein LOC100252...    56   3e-06
emb|CAN68800.1| hypothetical protein VITISV_008807 [Vitis vinifera]    56   3e-06

>ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|222871357|gb|EEF08488.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -2

Query: 346 VKAPKKSPLLLRTTVVLFAVFCGLYMFSICIKQTRFTTESMLLNIQVI 203
           +KAPKKSPL LR  V++FA+ CG+Y+ SIC+KQ    T    LN++VI
Sbjct: 6   IKAPKKSPLALRMVVLVFAMVCGVYICSICLKQIGIRTNPGFLNVEVI 53


>ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|222850249|gb|EEE87796.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -2

Query: 346 VKAPKKSPLLLRTTVVLFAVFCGLYMFSICIKQTRFTTESMLLNIQVI 203
           +KAPKKSPL LR  V++FA+ CG+Y+ SIC+KQ    T    LN++VI
Sbjct: 16  IKAPKKSPLALRMVVLVFAMVCGVYICSICLKQIGIRTNPGFLNVEVI 63


>ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|222835429|gb|EEE73864.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/47 (57%), Positives = 34/47 (72%)
 Frame = -2

Query: 346 VKAPKKSPLLLRTTVVLFAVFCGLYMFSICIKQTRFTTESMLLNIQV 206
           +K PKKSPLLLR  VV FA+ CG+Y+ SICIKQ    T +  LNI++
Sbjct: 15  IKGPKKSPLLLRLVVVAFAMVCGVYICSICIKQISPHTTAKFLNIRI 61


>ref|XP_002284367.1| PREDICTED: uncharacterized protein LOC100252224 [Vitis vinifera]
          Length = 344

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = -2

Query: 346 VKAPKKSPLLLRTTVVLFAVFCGLYMFSICIKQTRFTTESMLLNIQVI 203
           +K PKKSPLLL   V++FA+ CG+Y+ +IC+KQT   T++  L  QVI
Sbjct: 15  IKTPKKSPLLLTMVVLVFAMVCGVYICAICLKQTSNNTKAKFLKFQVI 62


>emb|CAN68800.1| hypothetical protein VITISV_008807 [Vitis vinifera]
          Length = 647

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = -2

Query: 346 VKAPKKSPLLLRTTVVLFAVFCGLYMFSICIKQTRFTTESMLLNIQVI 203
           +K PKKSPLLL   V++FA+ CG+Y+ +IC+KQT   T++  L  QVI
Sbjct: 314 IKTPKKSPLLLTMVVLVFAMVCGVYICAICLKQTSNNTKAKFLKFQVI 361


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