BLASTX nr result

ID: Bupleurum21_contig00022583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022583
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36710.1| unknown [Lotus japonicus]                               63   4e-08
ref|XP_003627297.1| Serine rich protein [Medicago truncatula] gi...    59   6e-07
ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06
ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>gb|AFK36710.1| unknown [Lotus japonicus]
          Length = 124

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 36/71 (50%), Positives = 42/71 (59%)
 Frame = +2

Query: 38  MATAYDEYTSQNSSSSQRXXXXXXXXXXXXXXSPLYMNQKNDKFHRSRHYDSKWSSGFVL 217
           MAT Y    S    SSQR              SPLY N ++D+    RHY+SKWSSGFVL
Sbjct: 1   MATTYAH--SSQYGSSQRSLGIVMALVSAVVLSPLYANSRSDR----RHYESKWSSGFVL 54

Query: 218 PMLLAGLIVAI 250
           PM+LAGLI+AI
Sbjct: 55  PMVLAGLIIAI 65


>ref|XP_003627297.1| Serine rich protein [Medicago truncatula]
           gi|66947623|emb|CAJ00007.1| serine rich protein
           [Medicago truncatula] gi|355521319|gb|AET01773.1| Serine
           rich protein [Medicago truncatula]
          Length = 127

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +2

Query: 59  YTSQNSSSSQRXXXXXXXXXXXXXXSPLYMNQKNDKFHRSRHYDSKW-SSGFVLPMLLAG 235
           Y S N  SSQR              SPLY+N K+D+    R+Y+SKW SSGFVLPM+L G
Sbjct: 5   YASSNHGSSQRSLAMVLALVSAVVLSPLYVNSKSDR----RYYESKWTSSGFVLPMILFG 60

Query: 236 LIVAI 250
           LI+AI
Sbjct: 61  LIIAI 65


>ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|222841565|gb|EEE79112.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/72 (51%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +2

Query: 38  MAT-AYDEYTSQNSSSSQRXXXXXXXXXXXXXXSPLYMNQKNDKFHRSRHYDSKWSSGFV 214
           MAT A     SQNSS  QR              SPLY+ +KND   R  +Y++KWSSGFV
Sbjct: 1   MATDACSSTASQNSS--QRVLAMVFALASAVVLSPLYVKRKNDHT-RYFNYETKWSSGFV 57

Query: 215 LPMLLAGLIVAI 250
           LPM+LAGLI+AI
Sbjct: 58  LPMVLAGLIIAI 69


>ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|222846846|gb|EEE84393.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/64 (46%), Positives = 40/64 (62%)
 Frame = +2

Query: 59  YTSQNSSSSQRXXXXXXXXXXXXXXSPLYMNQKNDKFHRSRHYDSKWSSGFVLPMLLAGL 238
           Y++ + +SSQR              SPLY+ +KND      H ++KWSSGFVLPM+LAGL
Sbjct: 6   YSAASRNSSQRALAMVLALASAVVLSPLYVKRKNDHTGYFNH-ETKWSSGFVLPMVLAGL 64

Query: 239 IVAI 250
           I+AI
Sbjct: 65  IIAI 68


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