BLASTX nr result

ID: Bupleurum21_contig00022582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022582
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280623.1| PREDICTED: uncharacterized protein LOC100251...   186   7e-45
ref|XP_002520876.1| two-component system sensor histidine kinase...   180   5e-43
ref|XP_002325489.1| type-a response regulator [Populus trichocar...   176   1e-41
emb|CBX43990.1| putative A-type response regulator 8 [Populus x ...   174   3e-41
emb|CAN76685.1| hypothetical protein VITISV_005468 [Vitis vinifera]   173   6e-41

>ref|XP_002280623.1| PREDICTED: uncharacterized protein LOC100251828 [Vitis vinifera]
            gi|297736482|emb|CBI25353.3| unnamed protein product
            [Vitis vinifera]
          Length = 305

 Score =  186 bits (473), Expect = 7e-45
 Identities = 96/218 (44%), Positives = 133/218 (61%), Gaps = 7/218 (3%)
 Frame = -2

Query: 1122 TCDGMSKKCHLNSITACLGLDGSS-----LYVLNDGDNSLKVNVTVLPVNTAYKDIELLR 958
            TC G    CH  +ITAC+    ++     L V NDG+ +L+V+VT+ PV++  KDI++ +
Sbjct: 88   TCKGSEMNCHNQNITACVFHPANAPMELFLLVNNDGEGTLEVDVTISPVDSTLKDIQIPK 147

Query: 957  HKARKXXXXXXXXXXXXXV-LNAGNGHCIIQMGAVVPKD-KINIQFPSLDTYITPINGAY 784
             +  K               L A NG C+I MG+   KD     QFP+    +TPI+G Y
Sbjct: 148  IQIPKHQMKKINVSEYAGSPLIALNGDCLIHMGSPPQKDTNFFKQFPAYANQVTPIHGVY 207

Query: 783  VLIVSALIIGGTWTCFKFWKKRPHTDGVPYQELEMGQSDLITSVNVESAEDWDQNWGDDW 604
            +L ++AL+IGGTW C K  KK    DGVPYQELEMGQ D +++++VE+AE WD+ W DDW
Sbjct: 208  LLSLTALLIGGTWACCKLGKKERQVDGVPYQELEMGQPDSLSTIHVETAEGWDRGWDDDW 267

Query: 603  DEEKAVKSADRNPIKSSTGNGTVSRSSISDGWRNDWDD 490
            DEE AVKS   N + + + NG  S+SS  DGW ++WDD
Sbjct: 268  DEENAVKSPGGNNVANGSANGHTSKSSGKDGWEDNWDD 305


>ref|XP_002520876.1| two-component system sensor histidine kinase/response regulator,
           putative [Ricinus communis] gi|223540007|gb|EEF41585.1|
           two-component system sensor histidine kinase/response
           regulator, putative [Ricinus communis]
          Length = 155

 Score =  180 bits (457), Expect = 5e-43
 Identities = 89/108 (82%), Positives = 97/108 (89%)
 Frame = -1

Query: 487 VTTAENGLRALEYLGLQDDQQNTLNGNVSKVTMIITDYCMPGMTGYELLKKIKESSMLKE 308
           VTTAENGLRALEYLGL DD +N L  NVSKV +IITDYCMPGMTGYELLKKIKESS++KE
Sbjct: 48  VTTAENGLRALEYLGLGDDDRNCLENNVSKVNLIITDYCMPGMTGYELLKKIKESSIMKE 107

Query: 307 VPVVIMSSENIPTRINKCLEEGAQMFMLKPLKLSDMKKLRGQLTKCGN 164
           VPVVI+SSENIPTRINKCLEEGAQMFMLKPLKLSD+KKLR  +  C +
Sbjct: 108 VPVVIVSSENIPTRINKCLEEGAQMFMLKPLKLSDVKKLRCDIMNCSS 155


>ref|XP_002325489.1| type-a response regulator [Populus trichocarpa]
           gi|222862364|gb|EEE99870.1| type-a response regulator
           [Populus trichocarpa]
          Length = 154

 Score =  176 bits (446), Expect = 1e-41
 Identities = 88/106 (83%), Positives = 95/106 (89%)
 Frame = -1

Query: 487 VTTAENGLRALEYLGLQDDQQNTLNGNVSKVTMIITDYCMPGMTGYELLKKIKESSMLKE 308
           VTTAENGLRALEYLGL D+++ +L  NVSKV +IITDYCMPGMTGYELLKKIKESSMLKE
Sbjct: 47  VTTAENGLRALEYLGLGDEKRTSLEDNVSKVNLIITDYCMPGMTGYELLKKIKESSMLKE 106

Query: 307 VPVVIMSSENIPTRINKCLEEGAQMFMLKPLKLSDMKKLRGQLTKC 170
           +PVVIMSSENIPTRINKCLEEGAQMFMLKPLK SD+ KLR  L  C
Sbjct: 107 IPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDVVKLRCNLMNC 152


>emb|CBX43990.1| putative A-type response regulator 8 [Populus x canadensis]
          Length = 154

 Score =  174 bits (442), Expect = 3e-41
 Identities = 87/106 (82%), Positives = 95/106 (89%)
 Frame = -1

Query: 487 VTTAENGLRALEYLGLQDDQQNTLNGNVSKVTMIITDYCMPGMTGYELLKKIKESSMLKE 308
           VTTAENGLRALEYLGL D+++ +L  NVSKV +IITDYCMPGMTGYELLKKIKESSMLK+
Sbjct: 47  VTTAENGLRALEYLGLGDEKRTSLEDNVSKVNLIITDYCMPGMTGYELLKKIKESSMLKK 106

Query: 307 VPVVIMSSENIPTRINKCLEEGAQMFMLKPLKLSDMKKLRGQLTKC 170
           +PVVIMSSENIPTRINKCLEEGAQMFMLKPLK SD+ KLR  L  C
Sbjct: 107 IPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDVVKLRCNLMNC 152


>emb|CAN76685.1| hypothetical protein VITISV_005468 [Vitis vinifera]
          Length = 193

 Score =  173 bits (439), Expect = 6e-41
 Identities = 87/189 (46%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
 Frame = -2

Query: 1050 LYVLNDGDNSLKVNVTVLPVNTAYKDIELLRHKARKXXXXXXXXXXXXXV-LNAGNGHCI 874
            L V NDG+ +L+V+VT+ PV++  KDI++ + +  K               L A NG C+
Sbjct: 5    LLVNNDGEGTLEVDVTISPVDSTLKDIQIPKIQIPKHQMKKINVSEYAGSPLIALNGDCL 64

Query: 873  IQMGAVVPKD-KINIQFPSLDTYITPINGAYVLIVSALIIGGTWTCFKFWKKRPHTDGVP 697
            I MG+   KD     QFP+    +TPI+G Y+L ++AL+IGGTW C K  KK    DGVP
Sbjct: 65   IHMGSPPQKDTNFFKQFPAYANQVTPIHGVYLLSLTALLIGGTWACCKLGKKERQVDGVP 124

Query: 696  YQELEMGQSDLITSVNVESAEDWDQNWGDDWDEEKAVKSADRNPIKSSTGNGTVSRSSIS 517
            YQELEMGQ D +++++VE+AE WD+ W DDWDEE AVKS   N + + + NG  S+SS  
Sbjct: 125  YQELEMGQPDSLSTIHVETAEGWDRGWDDDWDEENAVKSPGGNNVANGSANGHTSKSSGK 184

Query: 516  DGWRNDWDD 490
            DGW ++WDD
Sbjct: 185  DGWEDNWDD 193


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