BLASTX nr result

ID: Bupleurum21_contig00022557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022557
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274132.1| PREDICTED: spindle and kinetochore-associate...   105   5e-21
emb|CAN69643.1| hypothetical protein VITISV_028571 [Vitis vinifera]    96   4e-18
ref|XP_002876574.1| hypothetical protein ARALYDRAFT_486539 [Arab...    94   2e-17
ref|XP_003516443.1| PREDICTED: spindle and kinetochore-associate...    92   4e-17
ref|NP_191625.1| spindle and kinetochore-associated protein 1-li...    92   6e-17

>ref|XP_002274132.1| PREDICTED: spindle and kinetochore-associated protein 1 homolog
           [Vitis vinifera] gi|296089173|emb|CBI38876.3| unnamed
           protein product [Vitis vinifera]
          Length = 269

 Score =  105 bits (261), Expect = 5e-21
 Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
 Frame = +1

Query: 43  MEGKEVGAGATLESLMSCFNTRISELQQLVIARNMYPTXXXXXXXXXXXXVKAMEVQVHQ 222
           M+ KE  AG +L+S++S FNTRI+ELQ+LVI RNMYP             +KAME+QV  
Sbjct: 1   MDVKE--AGTSLDSIISSFNTRITELQELVIGRNMYPASSITDLTAVDASLKAMELQVQA 58

Query: 223 IKDRXXXXXXXXXXXXXXXXXSLQQQRKLQAMSAYVPSNPLERICTMNQETSASLLLENN 402
           IKDR                 SL+QQ+KLQ+M +YVPSN  +R+   N E+S SL+ E +
Sbjct: 59  IKDRLRDEIEAIPKAKKLIDASLRQQKKLQSMYSYVPSNFPDRVAPSNLESSKSLMSETS 118

Query: 403 KQDIPFSSVNY-EEPAVLPK 459
           KQ   F S  + EEPA  PK
Sbjct: 119 KQCTNFGSEKHEEEPAAPPK 138


>emb|CAN69643.1| hypothetical protein VITISV_028571 [Vitis vinifera]
          Length = 279

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 63/150 (42%), Positives = 83/150 (55%), Gaps = 11/150 (7%)
 Frame = +1

Query: 43  MEGKEVGAGATLESLMSCFNTRISELQQLVIARN----------MYPTXXXXXXXXXXXX 192
           M+ KE  AG +L+S++S FNTRI+ELQ+LVI RN          +YP             
Sbjct: 1   MDVKE--AGTSLDSIISSFNTRITELQELVIGRNNENRPFFRLAVYPASSITDLTAVDAS 58

Query: 193 VKAMEVQVHQIKDRXXXXXXXXXXXXXXXXXSLQQQRKLQAMSAYVPSNPLERICTMNQE 372
           +KAME+QV  IKDR                 SL+QQ+KLQ+M +YVPSN  +R+   N E
Sbjct: 59  LKAMELQVQAIKDRLRDEIEAIPKAKKLIDASLRQQKKLQSMYSYVPSNFPDRVAPSNLE 118

Query: 373 TSASLLLENNKQDIPFSSVNY-EEPAVLPK 459
           +S SL+ E +KQ   F S  + EEPA  PK
Sbjct: 119 SSKSLMSETSKQCTNFGSEKHEEEPAAPPK 148


>ref|XP_002876574.1| hypothetical protein ARALYDRAFT_486539 [Arabidopsis lyrata subsp.
           lyrata] gi|297322412|gb|EFH52833.1| hypothetical protein
           ARALYDRAFT_486539 [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 61/143 (42%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
 Frame = +1

Query: 43  MEGKEVGAGATLESLMSCFNTRISELQQLVIARNMYPTXXXXXXXXXXXXVKAMEVQVHQ 222
           MEG +  AG++L+SL++ FN RI ELQ+LVIARNMYP             + +ME+QV  
Sbjct: 1   MEGNQ--AGSSLDSLIASFNKRICELQELVIARNMYPASTIPDLSAIDTALSSMELQVQS 58

Query: 223 IKDRXXXXXXXXXXXXXXXXXSLQQQRKLQAMSAYVPSNPLERICTMNQETSASLLLENN 402
           IKDR                 SL+QQ KLQ MS Y PS+  ++   +N + +  LL EN 
Sbjct: 59  IKDRLREETEAIPKAKKLIESSLKQQGKLQKMSIYAPSHIPDKATMLNSDLNRCLLQENA 118

Query: 403 KQ----DIPFSSVNYEEPAVLPK 459
           KQ     IP S    EE AVLPK
Sbjct: 119 KQYEQHSIPSSLKFDEEVAVLPK 141


>ref|XP_003516443.1| PREDICTED: spindle and kinetochore-associated protein 1 homolog
           [Glycine max]
          Length = 270

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 58/134 (43%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
 Frame = +1

Query: 64  AGATLESLMSCFNTRISELQQLVIARNMYPTXXXXXXXXXXXXVKAMEVQVHQIKDRXXX 243
           AGA+L+SLMS FN RI++LQ+LVIARNMYP             V AME+QV  IKDR   
Sbjct: 6   AGASLDSLMSSFNARITQLQELVIARNMYPASGVEDLSAVDAAVSAMELQVKAIKDRLRE 65

Query: 244 XXXXXXXXXXXXXXSLQQQRKLQAMSAYVPSNPLERICTMNQETSASLLLENNKQDI-PF 420
                         SL+QQ+KLQ MS +VP    +++   + ETS  L  E + QD   F
Sbjct: 66  EALAIPKTKKLIDASLRQQKKLQNMSLHVPYQMADKVTVSHLETSRCLFPEFSGQDSGSF 125

Query: 421 SSVNY-EEPAVLPK 459
            ++   EEPA +PK
Sbjct: 126 EALKLEEEPAAVPK 139


>ref|NP_191625.1| spindle and kinetochore-associated protein 1-like protein
           [Arabidopsis thaliana]
           gi|75181374|sp|Q9LZZ7.1|SKA1_ARATH RecName: Full=Spindle
           and kinetochore-associated protein 1 homolog
           gi|7329676|emb|CAB82670.1| putative protein [Arabidopsis
           thaliana] gi|26450283|dbj|BAC42258.1| unknown protein
           [Arabidopsis thaliana] gi|28827580|gb|AAO50634.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646573|gb|AEE80094.1| spindle and
           kinetochore-associated protein 1-like protein
           [Arabidopsis thaliana]
          Length = 272

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
 Frame = +1

Query: 43  MEGKEVGAGATLESLMSCFNTRISELQQLVIARNMYPTXXXXXXXXXXXXVKAMEVQVHQ 222
           MEG +  AG++L+SL++ FN RI ELQ+LVIARNMYP             + +ME+QV  
Sbjct: 1   MEGNQ--AGSSLDSLIASFNKRIGELQELVIARNMYPASTIPDLSAIDTALSSMELQVQS 58

Query: 223 IKDRXXXXXXXXXXXXXXXXXSLQQQRKLQAMSAYVPSNPLERICTMNQETSASLLLENN 402
           IKDR                 SL+QQ KLQ MS Y PS+  ++   +N + +  LL EN 
Sbjct: 59  IKDRLREETEAIPKAKKLIEASLKQQGKLQKMSIYAPSHFPDKATMLNSDLNRCLLQENA 118

Query: 403 KQDIPFSSVNY----EEPAVLPK 459
           KQ    S+++     EE AVLPK
Sbjct: 119 KQYEQHSTLSSLKFDEEAAVLPK 141


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