BLASTX nr result

ID: Bupleurum21_contig00022530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022530
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800...   226   5e-57
ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783...   221   2e-55
ref|XP_002325202.1| predicted protein [Populus trichocarpa] gi|2...   217   3e-54
ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing...   206   4e-51
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]   203   4e-50

>ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800468 [Glycine max]
          Length = 1100

 Score =  226 bits (576), Expect = 5e-57
 Identities = 107/152 (70%), Positives = 123/152 (80%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 METEPLNIETQPNKRRKKKSVVWEHFTIENVGAGCRRACCKQCKQSFAYSTGSKVAGTSH 273
           + +E    ETQP+KRRKKKS+VWEHFTIE V  GCRRACCKQCKQSFAYSTGSKVAGTSH
Sbjct: 437 LNSEEPTPETQPSKRRKKKSIVWEHFTIETVSPGCRRACCKQCKQSFAYSTGSKVAGTSH 496

Query: 272 LKRHIAKGTCPVVQRNQ-KNQLSPYSAPTK-MGGLGGPIDAPRRRYRAASVPYVAFDSDR 99
           LKRHIAKGTCP + R Q +NQ SPY+  ++     G    AP+RRYR+ + PY+ FD DR
Sbjct: 497 LKRHIAKGTCPALLRGQDQNQFSPYTPRSRGSDAAGNASSAPKRRYRSPNTPYIIFDQDR 556

Query: 98  CRHEIARMIIMHDYPLDIVEHPGFIAFVKNLQ 3
           CRHEIARMIIMHDYPL +VEHPGF+AFV+NLQ
Sbjct: 557 CRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQ 588


>ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783258 [Glycine max]
          Length = 1154

 Score =  221 bits (562), Expect = 2e-55
 Identities = 105/152 (69%), Positives = 121/152 (79%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 METEPLNIETQPNKRRKKKSVVWEHFTIENVGAGCRRACCKQCKQSFAYSTGSKVAGTSH 273
           + +E    ETQP+KRRKKKS+VWEHFTIE V  GCRRACC QCKQSFAYSTGSKVAGTSH
Sbjct: 491 LNSEEPTPETQPSKRRKKKSIVWEHFTIETVSPGCRRACCMQCKQSFAYSTGSKVAGTSH 550

Query: 272 LKRHIAKGTCPVVQRNQ-KNQLSPYSAPTK-MGGLGGPIDAPRRRYRAASVPYVAFDSDR 99
           LKRHIAKGTCP + R Q +NQ S Y+  ++     G    AP+RRYR+ + PY+ FD DR
Sbjct: 551 LKRHIAKGTCPALLRGQDQNQFSSYTPRSRGSDAAGNASSAPKRRYRSPNTPYIIFDQDR 610

Query: 98  CRHEIARMIIMHDYPLDIVEHPGFIAFVKNLQ 3
           CRHEIARMIIMHDYPL +VEHPGF+AFV+NLQ
Sbjct: 611 CRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQ 642


>ref|XP_002325202.1| predicted protein [Populus trichocarpa] gi|222866636|gb|EEF03767.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score =  217 bits (552), Expect = 3e-54
 Identities = 105/142 (73%), Positives = 117/142 (82%)
 Frame = -1

Query: 428 ETQPNKRRKKKSVVWEHFTIENVGAGCRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKG 249
           ETQPNKRRKKKS+VWEHFTIENV  GCRRA C QCKQSFAYSTGSKVAGTSHLKRHIAKG
Sbjct: 19  ETQPNKRRKKKSIVWEHFTIENVSPGCRRASCNQCKQSFAYSTGSKVAGTSHLKRHIAKG 78

Query: 248 TCPVVQRNQKNQLSPYSAPTKMGGLGGPIDAPRRRYRAASVPYVAFDSDRCRHEIARMII 69
           TCP + RNQ    SP++    M G G   D P+RRYR+ S  Y++FDSDRCRHEIARM+I
Sbjct: 79  TCPALLRNQ----SPFT--PGMNGNGSMSDPPKRRYRSPSSAYISFDSDRCRHEIARMMI 132

Query: 68  MHDYPLDIVEHPGFIAFVKNLQ 3
           MHDYPL +VEH GF+AFV+NLQ
Sbjct: 133 MHDYPLHMVEHSGFLAFVQNLQ 154


>ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing protein 1-like
           [Glycine max]
          Length = 1038

 Score =  206 bits (525), Expect = 4e-51
 Identities = 98/143 (68%), Positives = 115/143 (80%), Gaps = 1/143 (0%)
 Frame = -1

Query: 428 ETQPNKRRKKKSVVWEHFTIENVGAGCRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKG 249
           E QP KRRKKKS+VWEHFTIE V   CRRA CKQC Q+FAYSTGSKVAGTSHLKRH+AKG
Sbjct: 399 EAQPIKRRKKKSIVWEHFTIEAVSPECRRARCKQCAQTFAYSTGSKVAGTSHLKRHVAKG 458

Query: 248 TCPVVQRN-QKNQLSPYSAPTKMGGLGGPIDAPRRRYRAASVPYVAFDSDRCRHEIARMI 72
           TC  + RN  +NQL+PY+A T+  G G      +R+YR+ S+PYV FD D+CR+EIARMI
Sbjct: 459 TCSALLRNHNRNQLTPYAARTRRSGTGDASSTRKRQYRSPSMPYVIFDQDQCRNEIARMI 518

Query: 71  IMHDYPLDIVEHPGFIAFVKNLQ 3
           IMHDYPL +VEH GF+AFV+NLQ
Sbjct: 519 IMHDYPLHMVEHSGFVAFVQNLQ 541


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score =  203 bits (516), Expect = 4e-50
 Identities = 103/164 (62%), Positives = 119/164 (72%), Gaps = 3/164 (1%)
 Frame = -1

Query: 485 SSLEMQMHP-LSMETEPLNIETQPNKRRKKKSVVWEHFTIENVGAGCRRACCKQCKQSFA 309
           SSL  +M    +   E  N E Q NKRR+KKS+VWEHFT+E V AGC RACCKQCK+SFA
Sbjct: 351 SSLSTKMEDTFTPNNEQANSEIQLNKRRRKKSIVWEHFTVETVSAGCTRACCKQCKKSFA 410

Query: 308 YSTGSKVAGTSHLKRHIAKGTCPVVQRNQ-KNQLSPYSAPTKMGGLGGPIDAPRRRYRAA 132
           Y TGSK+AGTSHLKRHIA G CPV +RNQ KNQL+PY+  ++ G  G   DAP+RRYR  
Sbjct: 411 YITGSKLAGTSHLKRHIALGICPVSRRNQEKNQLTPYTPASQAGFTGNSTDAPKRRYRGT 470

Query: 131 SV-PYVAFDSDRCRHEIARMIIMHDYPLDIVEHPGFIAFVKNLQ 3
            V   + FD DRC  EIA+MIIMH+YPL IVEH GFI FV  LQ
Sbjct: 471 PVSANIPFDQDRCNQEIAKMIIMHEYPLHIVEHSGFINFVHTLQ 514


Top