BLASTX nr result

ID: Bupleurum21_contig00022523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022523
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   504   e-140
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   483   e-134
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   481   e-133
ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...   475   e-132
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   461   e-127

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  504 bits (1299), Expect = e-140
 Identities = 254/342 (74%), Positives = 293/342 (85%)
 Frame = -1

Query: 1028 SELDSGQTLYSEALVASHRRTLMKSLLRAISLGTYAPGSTSRIYGSEESLLPHCLCIIFR 849
            +ELD  Q LYSEALVA H R LMK+LLRAISLGTYAPGST+RIYGSEESLLPHCLCIIFR
Sbjct: 850  TELDDIQPLYSEALVAYHCRLLMKALLRAISLGTYAPGSTTRIYGSEESLLPHCLCIIFR 909

Query: 848  KAKEFGGGVFSLAATVMSDLIHKDPTCFSVLEAAGLPSAFLDAITEGVLCSAEAITCIPQ 669
            +AK+FGGGVFSLAATVMSDLIHKDPTCF VL+AAGLPSAF+DAI +G+LCSAEAI CIPQ
Sbjct: 910  RAKDFGGGVFSLAATVMSDLIHKDPTCFPVLDAAGLPSAFMDAIMDGILCSAEAIACIPQ 969

Query: 668  CLDALCLSNNGLLAVRDSGALRCFVKIFTSKMYLRVLIGDTPGLISSGLDELMRHASSLR 489
            CLDALCL+NNGL AV+D  ALRCFVKIFTS+ YLR L GDTPG +SSGLDELMRHASSLR
Sbjct: 970  CLDALCLNNNGLQAVKDRNALRCFVKIFTSRTYLRALTGDTPGSLSSGLDELMRHASSLR 1029

Query: 488  VPGVEMLIEIVNVIVNLGSRSEVSYSSNDSLGCSTPVPMVTDSEEQNMVHLGDEKSCQAE 309
             PGV+MLIEI+N I  +GS +E   SS+DS+  STP+PM TD+E++N+V   D++S + E
Sbjct: 1030 GPGVDMLIEILNAISKIGSGTESPPSSSDSMCPSTPIPMETDAEDRNLVASDDKESSKME 1089

Query: 308  SFEKILEPASGALLTNVELFLPDYITNVTRLLETLLQNSDTCRIFIEKKGIEAVLQFLTL 129
            S E+ +EP+S A L N+E FLP+ I+N  RLLET+LQN+DTCRIF+EKKGIEAVLQ  TL
Sbjct: 1090 SSEQAMEPSSDASLANIESFLPECISNAARLLETILQNADTCRIFVEKKGIEAVLQLFTL 1149

Query: 128  PLMPLSASVGQSISAAFKNFSMQHSVSLVKAVCSFLREHLKM 3
            PLMPLS SVGQSIS AF+NFS QHS SL +AVC FLREHLK+
Sbjct: 1150 PLMPLSVSVGQSISVAFRNFSPQHSASLARAVCLFLREHLKL 1191


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  483 bits (1243), Expect = e-134
 Identities = 246/341 (72%), Positives = 285/341 (83%)
 Frame = -1

Query: 1028 SELDSGQTLYSEALVASHRRTLMKSLLRAISLGTYAPGSTSRIYGSEESLLPHCLCIIFR 849
            SELD+   LYSEALV+ HRR LMK+LLRAISLGTYAPG+TSR+YGSEESLLP CLC+IFR
Sbjct: 488  SELDNMHPLYSEALVSYHRRLLMKALLRAISLGTYAPGNTSRLYGSEESLLPQCLCVIFR 547

Query: 848  KAKEFGGGVFSLAATVMSDLIHKDPTCFSVLEAAGLPSAFLDAITEGVLCSAEAITCIPQ 669
            ++K+FGGGVFSLAATVMSDLIHKDPTCF VLEAAGLPSAFLDAI +GVLCSAEA+ CIPQ
Sbjct: 548  RSKDFGGGVFSLAATVMSDLIHKDPTCFPVLEAAGLPSAFLDAIMDGVLCSAEAVMCIPQ 607

Query: 668  CLDALCLSNNGLLAVRDSGALRCFVKIFTSKMYLRVLIGDTPGLISSGLDELMRHASSLR 489
            CLDALCL+N GL AVRD  ALRCFVKIFTS+ YLR L G+TPG +S+GLDELMRHASSLR
Sbjct: 608  CLDALCLNNIGLQAVRDRNALRCFVKIFTSRTYLRALAGETPGSLSTGLDELMRHASSLR 667

Query: 488  VPGVEMLIEIVNVIVNLGSRSEVSYSSNDSLGCSTPVPMVTDSEEQNMVHLGDEKSCQAE 309
             PGV+M+IEI+N I+ +GS  + S SS+D   CSTPVPM TD+EE+       ++S + +
Sbjct: 668  GPGVDMVIEILNAILKIGSGVDASCSSSDPPSCSTPVPMETDAEERGSAPSDVKESTRMD 727

Query: 308  SFEKILEPASGALLTNVELFLPDYITNVTRLLETLLQNSDTCRIFIEKKGIEAVLQFLTL 129
            S E  L   S A + ++E FLPD ++N  RLLET+LQN+DTCRIFIEKKGI+AVLQ L L
Sbjct: 728  SSEH-LSDLSDASIVSIESFLPDCVSNAARLLETILQNADTCRIFIEKKGIDAVLQLLNL 786

Query: 128  PLMPLSASVGQSISAAFKNFSMQHSVSLVKAVCSFLREHLK 6
            PLMPLSAS+GQSIS AFKNFS QHS SL +AVCSFLREHLK
Sbjct: 787  PLMPLSASIGQSISIAFKNFSQQHSASLSRAVCSFLREHLK 827


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  481 bits (1237), Expect = e-133
 Identities = 245/341 (71%), Positives = 281/341 (82%)
 Frame = -1

Query: 1028 SELDSGQTLYSEALVASHRRTLMKSLLRAISLGTYAPGSTSRIYGSEESLLPHCLCIIFR 849
            SELDS   LYSEALVA HRR LMK+LLRAISLGTYA G+TSRIYGSEESLLP CLCIIFR
Sbjct: 488  SELDSMLPLYSEALVAYHRRLLMKALLRAISLGTYASGNTSRIYGSEESLLPQCLCIIFR 547

Query: 848  KAKEFGGGVFSLAATVMSDLIHKDPTCFSVLEAAGLPSAFLDAITEGVLCSAEAITCIPQ 669
            +AK+FGGGVFSLAATVMSDLIHKDPTCF +L+AAGLPSAFLDAI +GVLCS+EAI CIPQ
Sbjct: 548  RAKDFGGGVFSLAATVMSDLIHKDPTCFPILDAAGLPSAFLDAIMDGVLCSSEAIMCIPQ 607

Query: 668  CLDALCLSNNGLLAVRDSGALRCFVKIFTSKMYLRVLIGDTPGLISSGLDELMRHASSLR 489
            CLDALCL+NNGL AV+D  ALRCFVKIFTSK YLR L G+ PG +SSGLDELMRHASSLR
Sbjct: 608  CLDALCLNNNGLQAVKDRNALRCFVKIFTSKTYLRALFGEAPGSLSSGLDELMRHASSLR 667

Query: 488  VPGVEMLIEIVNVIVNLGSRSEVSYSSNDSLGCSTPVPMVTDSEEQNMVHLGDEKSCQAE 309
             PGV+M+IEI+N I  +GS  + SYS  D   CS PVPM TD+EE++ V   D +S + E
Sbjct: 668  GPGVDMVIEILNAISKIGSGVDASYSPTDP-SCSAPVPMETDAEERSPVLSDDRESFRME 726

Query: 308  SFEKILEPASGALLTNVELFLPDYITNVTRLLETLLQNSDTCRIFIEKKGIEAVLQFLTL 129
            + E+  E +S A + NVE   P+ ++NV RLLET+LQNSDTCRIF+EKKGI+AVLQ  TL
Sbjct: 727  TLEQATEQSSDASVANVESLFPECLSNVARLLETILQNSDTCRIFVEKKGIDAVLQLFTL 786

Query: 128  PLMPLSASVGQSISAAFKNFSMQHSVSLVKAVCSFLREHLK 6
            PLMPLS  +GQ IS AFKNFS QHS SL ++VC+FLREHLK
Sbjct: 787  PLMPLSTPIGQIISVAFKNFSPQHSASLARSVCAFLREHLK 827


>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score =  475 bits (1222), Expect = e-132
 Identities = 241/341 (70%), Positives = 281/341 (82%)
 Frame = -1

Query: 1028 SELDSGQTLYSEALVASHRRTLMKSLLRAISLGTYAPGSTSRIYGSEESLLPHCLCIIFR 849
            SELDS   LYSEALVA HRR LMK+LLRAISLGTYA G+TSRIYGSEESLLP CLC+IFR
Sbjct: 488  SELDSMLPLYSEALVAYHRRLLMKALLRAISLGTYAAGNTSRIYGSEESLLPQCLCLIFR 547

Query: 848  KAKEFGGGVFSLAATVMSDLIHKDPTCFSVLEAAGLPSAFLDAITEGVLCSAEAITCIPQ 669
            +AK+FGGGVFSLAATVMSDLIHKDPTCF +L+AAGLPSAFL+AI +GVLCS+EAI CIPQ
Sbjct: 548  RAKDFGGGVFSLAATVMSDLIHKDPTCFPILDAAGLPSAFLNAIMDGVLCSSEAIMCIPQ 607

Query: 668  CLDALCLSNNGLLAVRDSGALRCFVKIFTSKMYLRVLIGDTPGLISSGLDELMRHASSLR 489
            CLDALCL+NNGL AV+D  ALRCFVKIFTSK YLR L G+TPG +S+GLDELMRHASSLR
Sbjct: 608  CLDALCLNNNGLQAVKDRNALRCFVKIFTSKTYLRALFGETPGSLSTGLDELMRHASSLR 667

Query: 488  VPGVEMLIEIVNVIVNLGSRSEVSYSSNDSLGCSTPVPMVTDSEEQNMVHLGDEKSCQAE 309
             PGV+MLIEI+NVI  +GS  + S +S D   CS PVPM TD+EE+++V   D  S + E
Sbjct: 668  GPGVDMLIEILNVITKIGSGVDGSCASTDP-SCSAPVPMETDAEERSLVLSDDRGSFRME 726

Query: 308  SFEKILEPASGALLTNVELFLPDYITNVTRLLETLLQNSDTCRIFIEKKGIEAVLQFLTL 129
            + E+  E +S     N++   P+ ++NV RLLET+LQNSDTC IF+EKKGI+AVLQ  TL
Sbjct: 727  TLEQTTEQSSDTSAANIDSLFPECLSNVARLLETVLQNSDTCHIFVEKKGIDAVLQLFTL 786

Query: 128  PLMPLSASVGQSISAAFKNFSMQHSVSLVKAVCSFLREHLK 6
            PLMP+S S+GQ IS AFKNFS QHS SL +AVC+FLREHLK
Sbjct: 787  PLMPISTSIGQIISVAFKNFSHQHSASLARAVCAFLREHLK 827


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score =  461 bits (1185), Expect = e-127
 Identities = 235/338 (69%), Positives = 274/338 (81%)
 Frame = -1

Query: 1019 DSGQTLYSEALVASHRRTLMKSLLRAISLGTYAPGSTSRIYGSEESLLPHCLCIIFRKAK 840
            D  Q LYSE L++ HRR LMK+LLRAISLGTYAPG+T+RIYGSEE++LPHCLCIIFR+AK
Sbjct: 491  DDTQPLYSELLISYHRRLLMKALLRAISLGTYAPGNTARIYGSEENVLPHCLCIIFRRAK 550

Query: 839  EFGGGVFSLAATVMSDLIHKDPTCFSVLEAAGLPSAFLDAITEGVLCSAEAITCIPQCLD 660
            +FGGGVFSLAATVMSDLI KDPTCF VL+AAGLPSAFLDAI   VL SAEAITCIPQCLD
Sbjct: 551  DFGGGVFSLAATVMSDLIQKDPTCFPVLDAAGLPSAFLDAIMVDVLNSAEAITCIPQCLD 610

Query: 659  ALCLSNNGLLAVRDSGALRCFVKIFTSKMYLRVLIGDTPGLISSGLDELMRHASSLRVPG 480
            ALCL++NGL AV+D  +LRCFVK+FTS+ YLR L GDTP  +SSGLDELMRHASSLR PG
Sbjct: 611  ALCLNSNGLQAVKDRNSLRCFVKVFTSRTYLRALAGDTPASLSSGLDELMRHASSLRGPG 670

Query: 479  VEMLIEIVNVIVNLGSRSEVSYSSNDSLGCSTPVPMVTDSEEQNMVHLGDEKSCQAESFE 300
            VEML+EI+  I  +GS  + S  S D    ST VPM  D E++N++   +++S  A   E
Sbjct: 671  VEMLVEILEAISKIGSAVDSSSLSPDPCS-STSVPMEMDGEDKNLILPNNKESSNANDTE 729

Query: 299  KILEPASGALLTNVELFLPDYITNVTRLLETLLQNSDTCRIFIEKKGIEAVLQFLTLPLM 120
            +I EP+    + NVE FLPD + N+ RLLET+LQN+DTCRIF+EKKGIEA+LQ +TLPLM
Sbjct: 730  QITEPSHDVPIVNVESFLPDCVNNIARLLETILQNADTCRIFVEKKGIEAILQLVTLPLM 789

Query: 119  PLSASVGQSISAAFKNFSMQHSVSLVKAVCSFLREHLK 6
            P S SVGQSIS AFKNFS QH VSL +AVCSFLREHLK
Sbjct: 790  PPSVSVGQSISVAFKNFSPQHYVSLARAVCSFLREHLK 827


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