BLASTX nr result

ID: Bupleurum21_contig00022521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022521
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27180.3| unnamed protein product [Vitis vinifera]              306   5e-81
ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   306   5e-81
ref|XP_002528171.1| rubisco subunit binding-protein alpha subuni...   300   5e-79
ref|XP_003556668.1| PREDICTED: ruBisCO large subunit-binding pro...   296   5e-78
ref|XP_003528549.1| PREDICTED: ruBisCO large subunit-binding pro...   292   1e-76

>emb|CBI27180.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  306 bits (784), Expect = 5e-81
 Identities = 152/205 (74%), Positives = 174/205 (84%)
 Frame = +3

Query: 3   STKAELHARIAQIKKDLAQSDTGYMTRRLSERIAKLSGGVAIIKVGAHTEMELEDRKLRI 182
           STK E+ ARI QIKKDLA++D+ Y++R+LSERIAKLSGGVAIIKVGAHTE ELEDRKLRI
Sbjct: 378 STKPEIQARILQIKKDLAETDSSYLSRKLSERIAKLSGGVAIIKVGAHTETELEDRKLRI 437

Query: 183 EDAKNATFAAMDEGIVPGGGATYVHLSEYIPNIKTYLVEPDESIGADIIGMALLAPSKFI 362
           EDAKNATFAAMDEGIVPGGGATY+HL E IP IK  + +PDE IGADI+  AL AP+K I
Sbjct: 438 EDAKNATFAAMDEGIVPGGGATYIHLEEQIPIIKHSMEDPDEQIGADIVAKALAAPAKAI 497

Query: 363 AANAGVDGDIVVENIRASEWKIGYNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGLI 542
           A NAGVDG +V+E IR  +W+ GY+AM  RY+DLL  GVVDPCRVSRCALQNAVSVAG++
Sbjct: 498 ATNAGVDGAVVIEKIRTCDWRTGYDAMTGRYQDLLNAGVVDPCRVSRCALQNAVSVAGIV 557

Query: 543 LTTQAVLVEKIKTPKPPIPLVPGIT 617
           LTTQAVLVEK K PK  +P +PGIT
Sbjct: 558 LTTQAVLVEKTKPPKSAVPRLPGIT 582


>ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Vitis
            vinifera]
          Length = 602

 Score =  306 bits (784), Expect = 5e-81
 Identities = 152/205 (74%), Positives = 174/205 (84%)
 Frame = +3

Query: 3    STKAELHARIAQIKKDLAQSDTGYMTRRLSERIAKLSGGVAIIKVGAHTEMELEDRKLRI 182
            STK E+ ARI QIKKDLA++D+ Y++R+LSERIAKLSGGVAIIKVGAHTE ELEDRKLRI
Sbjct: 397  STKPEIQARILQIKKDLAETDSSYLSRKLSERIAKLSGGVAIIKVGAHTETELEDRKLRI 456

Query: 183  EDAKNATFAAMDEGIVPGGGATYVHLSEYIPNIKTYLVEPDESIGADIIGMALLAPSKFI 362
            EDAKNATFAAMDEGIVPGGGATY+HL E IP IK  + +PDE IGADI+  AL AP+K I
Sbjct: 457  EDAKNATFAAMDEGIVPGGGATYIHLEEQIPIIKHSMEDPDEQIGADIVAKALAAPAKAI 516

Query: 363  AANAGVDGDIVVENIRASEWKIGYNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGLI 542
            A NAGVDG +V+E IR  +W+ GY+AM  RY+DLL  GVVDPCRVSRCALQNAVSVAG++
Sbjct: 517  ATNAGVDGAVVIEKIRTCDWRTGYDAMTGRYQDLLNAGVVDPCRVSRCALQNAVSVAGIV 576

Query: 543  LTTQAVLVEKIKTPKPPIPLVPGIT 617
            LTTQAVLVEK K PK  +P +PGIT
Sbjct: 577  LTTQAVLVEKTKPPKSAVPRLPGIT 601


>ref|XP_002528171.1| rubisco subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis] gi|223532428|gb|EEF34222.1| rubisco
           subunit binding-protein alpha subunit, ruba, putative
           [Ricinus communis]
          Length = 556

 Score =  300 bits (767), Expect = 5e-79
 Identities = 148/205 (72%), Positives = 174/205 (84%)
 Frame = +3

Query: 3   STKAELHARIAQIKKDLAQSDTGYMTRRLSERIAKLSGGVAIIKVGAHTEMELEDRKLRI 182
           STKAE+ ARI Q+KKDLA++D  Y++R+LSERIAKLSGGVA+IKVGAHTE ELEDRKLRI
Sbjct: 351 STKAEIQARILQMKKDLAETDNKYLSRKLSERIAKLSGGVALIKVGAHTETELEDRKLRI 410

Query: 183 EDAKNATFAAMDEGIVPGGGATYVHLSEYIPNIKTYLVEPDESIGADIIGMALLAPSKFI 362
           EDAKNAT+AAMDEGIVPGGGA YVHLSE I  I+  + + +E IGADI+  ALL P+K I
Sbjct: 411 EDAKNATYAAMDEGIVPGGGAAYVHLSEQISTIQDSMEDENEQIGADIVAKALLVPAKTI 470

Query: 363 AANAGVDGDIVVENIRASEWKIGYNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGLI 542
           A NAGVDG +VVE IR+S+W+IG+NAM   YEDLL  GVVDPCRVSRCALQ+A S+AGL+
Sbjct: 471 ATNAGVDGAVVVEKIRSSDWRIGFNAMTGEYEDLLDAGVVDPCRVSRCALQSAASIAGLV 530

Query: 543 LTTQAVLVEKIKTPKPPIPLVPGIT 617
           LTTQA+LVE+ K PKP +P VPGIT
Sbjct: 531 LTTQAILVERTKKPKPAVPHVPGIT 555


>ref|XP_003556668.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Glycine max]
          Length = 589

 Score =  296 bits (758), Expect = 5e-78
 Identities = 147/205 (71%), Positives = 172/205 (83%)
 Frame = +3

Query: 3   STKAELHARIAQIKKDLAQSDTGYMTRRLSERIAKLSGGVAIIKVGAHTEMELEDRKLRI 182
           S KAE+ ARI+QIKKDL+++D   ++R+LSERIAKLSGGVA+IKVGAHTE+ELEDRKLRI
Sbjct: 384 SLKAEIQARISQIKKDLSETDNANLSRKLSERIAKLSGGVAVIKVGAHTELELEDRKLRI 443

Query: 183 EDAKNATFAAMDEGIVPGGGATYVHLSEYIPNIKTYLVEPDESIGADIIGMALLAPSKFI 362
           EDAKNATFAA+ EGIVPGGGATYVHL + IP I+  + + DE IGADI+  ALL P+K I
Sbjct: 444 EDAKNATFAAISEGIVPGGGATYVHLLDLIPTIRNSMEDLDEQIGADIVAKALLEPAKSI 503

Query: 363 AANAGVDGDIVVENIRASEWKIGYNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGLI 542
           A NAGVDGDIVV   R  +W+ GYNAM   YEDLL  GV DP RV+RCALQ+AVSVAG+I
Sbjct: 504 ATNAGVDGDIVVRKTRTHDWRTGYNAMTGTYEDLLNAGVADPSRVARCALQSAVSVAGVI 563

Query: 543 LTTQAVLVEKIKTPKPPIPLVPGIT 617
           LTTQA+LV+KIK PKPP+PLVPGIT
Sbjct: 564 LTTQAILVDKIKKPKPPVPLVPGIT 588


>ref|XP_003528549.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Glycine max]
          Length = 548

 Score =  292 bits (747), Expect = 1e-76
 Identities = 144/205 (70%), Positives = 172/205 (83%)
 Frame = +3

Query: 3   STKAELHARIAQIKKDLAQSDTGYMTRRLSERIAKLSGGVAIIKVGAHTEMELEDRKLRI 182
           S KAE+ ARI+QIKKDL+++D   ++R+LSERIAKLSGG+A+IKVGAHTE+ELEDRKLRI
Sbjct: 343 SMKAEIQARISQIKKDLSETDNANLSRKLSERIAKLSGGIAVIKVGAHTEVELEDRKLRI 402

Query: 183 EDAKNATFAAMDEGIVPGGGATYVHLSEYIPNIKTYLVEPDESIGADIIGMALLAPSKFI 362
           +DAKNATFAA+ EGIVPGGGATYVHL + IP I   + + +E IGADI+  ALL P+K I
Sbjct: 403 DDAKNATFAAISEGIVPGGGATYVHLLDLIPTIMNSMEDLEEQIGADIVAKALLEPAKSI 462

Query: 363 AANAGVDGDIVVENIRASEWKIGYNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGLI 542
           A NAGVDGDIVV+ IR  +W+IGYNAM   YEDLL  GV DP RV+RCALQ+AVSVAG +
Sbjct: 463 ATNAGVDGDIVVQKIRTHDWRIGYNAMTGTYEDLLNAGVADPSRVARCALQSAVSVAGAV 522

Query: 543 LTTQAVLVEKIKTPKPPIPLVPGIT 617
           LTTQA+LV+KIK  KPP+PLVPGIT
Sbjct: 523 LTTQAILVDKIKKTKPPVPLVPGIT 547


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