BLASTX nr result

ID: Bupleurum21_contig00022422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022422
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589327.1| GTP-binding protein hflX [Medicago truncatul...    61   1e-07
emb|CBI19757.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002281042.1| PREDICTED: GTPase HflX-like [Vitis vinifera]       60   2e-07
ref|XP_004154856.1| PREDICTED: GTPase HflX-like [Cucumis sativus]      59   4e-07
ref|XP_004147849.1| PREDICTED: GTPase HflX-like [Cucumis sativus]      59   4e-07

>ref|XP_003589327.1| GTP-binding protein hflX [Medicago truncatula]
           gi|358348476|ref|XP_003638272.1| GTP-binding protein
           hflX [Medicago truncatula] gi|355478375|gb|AES59578.1|
           GTP-binding protein hflX [Medicago truncatula]
           gi|355504207|gb|AES85410.1| GTP-binding protein hflX
           [Medicago truncatula]
          Length = 545

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/66 (48%), Positives = 42/66 (63%)
 Frame = -3

Query: 199 QSSPPASIEEELVVAEDQVQSPPRKRISKKKEEDDVDGADTRFKLQNGREVFEEKAYLVG 20
           QSSPP          ED+  +  +K+   K ++D+    D RFKL+NGREVFEEKAYLVG
Sbjct: 79  QSSPPTP-------DEDKSTTKLKKKKKDKNDDDNSSNIDNRFKLRNGREVFEEKAYLVG 131

Query: 19  VTQKGD 2
           V +KG+
Sbjct: 132 VERKGE 137


>emb|CBI19757.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
 Frame = -3

Query: 262 VVRAVHDGVAGILSPDDAVSVQSSPPASIEEELVVA----------EDQVQSPPRKRISK 113
           +VR +  GV G++SPDD    +  P   ++EE V A          E++    P  R+ K
Sbjct: 63  LVRVLQRGV-GLVSPDDLSLPE--PVIDVKEEEVFAVVDGVAGTKAEEKTLKAPT-RVKK 118

Query: 112 KKEEDDVDGADTRFKLQNGREVFEEKAYLVGVTQKGD 2
           K  E + D  D RFKL+NGREVFEEKAYLV V  KGD
Sbjct: 119 KGGEGESD--DNRFKLRNGREVFEEKAYLVAVELKGD 153


>ref|XP_002281042.1| PREDICTED: GTPase HflX-like [Vitis vinifera]
          Length = 547

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
 Frame = -3

Query: 262 VVRAVHDGVAGILSPDDAVSVQSSPPASIEEELVVA----------EDQVQSPPRKRISK 113
           +VR +  GV G++SPDD    +  P   ++EE V A          E++    P  R+ K
Sbjct: 51  LVRVLQRGV-GLVSPDDLSLPE--PVIDVKEEEVFAVVDGVAGTKAEEKTLKAPT-RVKK 106

Query: 112 KKEEDDVDGADTRFKLQNGREVFEEKAYLVGVTQKGD 2
           K  E + D  D RFKL+NGREVFEEKAYLV V  KGD
Sbjct: 107 KGGEGESD--DNRFKLRNGREVFEEKAYLVAVELKGD 141


>ref|XP_004154856.1| PREDICTED: GTPase HflX-like [Cucumis sativus]
          Length = 548

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/51 (60%), Positives = 37/51 (72%)
 Frame = -3

Query: 154 EDQVQSPPRKRISKKKEEDDVDGADTRFKLQNGREVFEEKAYLVGVTQKGD 2
           E + Q P R    KKK ++D D  + RFKL+NGREVFEEKAYLVGV +KGD
Sbjct: 95  EPKSQLPSRV---KKKTQEDGDSIEGRFKLRNGREVFEEKAYLVGVERKGD 142


>ref|XP_004147849.1| PREDICTED: GTPase HflX-like [Cucumis sativus]
          Length = 548

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/51 (60%), Positives = 37/51 (72%)
 Frame = -3

Query: 154 EDQVQSPPRKRISKKKEEDDVDGADTRFKLQNGREVFEEKAYLVGVTQKGD 2
           E + Q P R    KKK ++D D  + RFKL+NGREVFEEKAYLVGV +KGD
Sbjct: 95  EPKSQLPSRV---KKKTQEDGDSIEGRFKLRNGREVFEEKAYLVGVERKGD 142


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