BLASTX nr result

ID: Bupleurum21_contig00022263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022263
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26064.3| unnamed protein product [Vitis vinifera]              221   3e-55
ref|XP_002275999.1| PREDICTED: uncharacterized protein LOC100245...   218   2e-54
ref|XP_002330339.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-48
emb|CAN63568.1| hypothetical protein VITISV_043429 [Vitis vinifera]   199   1e-48
ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254...   188   3e-45

>emb|CBI26064.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  221 bits (563), Expect = 3e-55
 Identities = 164/442 (37%), Positives = 235/442 (53%), Gaps = 36/442 (8%)
 Frame = -3

Query: 1255 LLARGWHSDQPKNHS--------LVFLTPGISNFSKG-LRKGKQYYDSVTDVLSKVGSEP 1103
            LLARGWHS+QP+ H+        LVFL PG+  FS+  L KG  Y+DSV+DVLSKV S+P
Sbjct: 356  LLARGWHSEQPRGHNYAAGSKQPLVFLIPGVKKFSRRKLVKGSHYFDSVSDVLSKVASDP 415

Query: 1102 ELLELDTGKNEGQKTEESEWFKETTK--QENLPEKRH-CYLQPPTASSNMDVVRFTVVDT 932
             LLE +   +EG K++E       TK  +++L ++RH CYLQP T + N+D+V+FTVVDT
Sbjct: 416  GLLEFEIEADEGNKSKEESGLTNETKLDKDDLSDQRHHCYLQPRTPNRNVDIVKFTVVDT 475

Query: 931  SLAIGKSSRVTELRTLPKNILQILTLSEDSNNCTSVVSY--NKSDFAHDIYVDQEEKNTI 758
            SLA G   +  E+R+LP          E SN  TS   +  N  D + ++ VD+   ++ 
Sbjct: 476  SLANGAKYKEKEVRSLP---------FESSNTSTSSSHFEENDEDTSEELVVDESNSDST 526

Query: 757  TNPEIXXXXXXXXXXXXSEQLIQISGLQRNEFCNDHKQTRKAVKNHLKQKLN---QNEPA 587
            + P                   ++   Q     N  KQ+R A K HL +K+     N  A
Sbjct: 527  SLPA------------------KVPKSQNTNMYNAKKQSR-APKCHLGRKMKPDMSNYLA 567

Query: 586  SVPKRQKTITACNNEEISSG--------KFGEDVHCCCSNIHD----LNNKVGSLQDRF- 446
             V KR++ +TAC+  E S          +  ++    C   HD    ++ KV  L ++  
Sbjct: 568  PVTKRRRRLTACSRAETSQSTITFLVGPELKQEESGGCIGKHDSDEIIHCKVVPLTEKLC 627

Query: 445  SVTSTTKESSPQSIGGTQDNGVHGLQNP----QFRILIDLNLPQQPVEFEDGIFITDLAN 278
            S +S+ K+S      G   +   G ++P    QFR +IDLNLP  P + E G  +   ++
Sbjct: 628  SSSSSCKDSRIDGREGMLSSNCSGAEHPREELQFRTMIDLNLPVLP-DAETGEPVLVASS 686

Query: 277  MQNDIKSKEQQDDFCAPKASLYSNDPEHPANMNSRRQSTRNRPPTARALEALANGYLTAS 98
             + D ++ +Q DD  A K S+   + E P NMNSRRQSTRNRP T +ALEALA+G+L   
Sbjct: 687  ERQDDQASKQADDPNALKTSIGVANSEQPPNMNSRRQSTRNRPLTTKALEALASGFLNTR 746

Query: 97   NRRKK--DSALHETKRSRPCRR 38
             RR+K  ++   E   SRP RR
Sbjct: 747  RRRRKRTEAFPGEDLISRPSRR 768


>ref|XP_002275999.1| PREDICTED: uncharacterized protein LOC100245979 [Vitis vinifera]
          Length = 894

 Score =  218 bits (556), Expect = 2e-54
 Identities = 166/461 (36%), Positives = 243/461 (52%), Gaps = 55/461 (11%)
 Frame = -3

Query: 1255 LLARGWHSDQPKNHS--------LVFLTPGISNFSKG-LRKGKQYYDSVTDVLSKVGSEP 1103
            LLARGWHS+QP+ H+        LVFL PG+  FS+  L KG  Y+DSV+DVLSKV S+P
Sbjct: 384  LLARGWHSEQPRGHNYAAGSKQPLVFLIPGVKKFSRRKLVKGSHYFDSVSDVLSKVASDP 443

Query: 1102 ELLELDTGKNEGQKTEESEWFKETTK--QENLPEKRH-CYLQPPTASSNMDVVRFTVVDT 932
             LLE +   +EG K++E       TK  +++L ++RH CYLQP T + N+D+V+FTVVDT
Sbjct: 444  GLLEFEIEADEGNKSKEESGLTNETKLDKDDLSDQRHHCYLQPRTPNRNVDIVKFTVVDT 503

Query: 931  SLAIGKSSRVTELRTLPKNILQILTLS----EDSNNCTSVVSYNKSDFAHDIYVDQEEKN 764
            SLA G   +  E+R+LP       T S    E+  + +  +  ++S+  ++++++QEE N
Sbjct: 504  SLANGAKYKEKEVRSLPFESSNTSTSSSHFEENDEDTSEELVVDESNSGYNMFLNQEETN 563

Query: 763  TITNPEIXXXXXXXXXXXXSEQLIQISGLQRNE-----------------FCNDHKQTRK 635
                 +I            SE      G+  N+                   N  KQ+R 
Sbjct: 564  YSNPTKIIFEGRVCSGSKDSEISAVNQGIPTNDPDSTSLPAKVPKSQNTNMYNAKKQSR- 622

Query: 634  AVKNHLKQKLN---QNEPASVPKRQKTITACNNEEISSG--------KFGEDVHCCCSNI 488
            A K HL +K+     N  A V KR++ +TAC+  E S          +  ++    C   
Sbjct: 623  APKCHLGRKMKPDMSNYLAPVTKRRRRLTACSRAETSQSTITFLVGPELKQEESGGCIGK 682

Query: 487  HD----LNNKVGSLQDRF-SVTSTTKESSPQSIGGTQDNGVHGLQNP----QFRILIDLN 335
            HD    ++ KV  L ++  S +S+ K+S      G   +   G ++P    QFR +IDLN
Sbjct: 683  HDSDEIIHCKVVPLTEKLCSSSSSCKDSRIDGREGMLSSNCSGAEHPREELQFRTMIDLN 742

Query: 334  LPQQPVEFEDGIFITDLANMQNDIKSKEQQDDFCAPKASLYSNDPEHPANMNSRRQSTRN 155
            LP  P + E G  +   ++ + D ++ +Q DD  A K S+   + E P NMNSRRQSTRN
Sbjct: 743  LPVLP-DAETGEPVLVASSERQDDQASKQADDPNALKTSIGVANSEQPPNMNSRRQSTRN 801

Query: 154  RPPTARALEALANGYLTASNRRKK--DSALHETKRSRPCRR 38
            RP T +ALEALA+G+L    RR+K  ++   E   SRP RR
Sbjct: 802  RPLTTKALEALASGFLNTRRRRRKRTEAFPGEDLISRPSRR 842


>ref|XP_002330339.1| predicted protein [Populus trichocarpa] gi|222871543|gb|EEF08674.1|
            predicted protein [Populus trichocarpa]
          Length = 873

 Score =  199 bits (507), Expect = 1e-48
 Identities = 159/459 (34%), Positives = 229/459 (49%), Gaps = 54/459 (11%)
 Frame = -3

Query: 1255 LLARGWHSDQPKNH--------SLVFLTPGISNFSKG-LRKGKQYYDSVTDVLSKVGSEP 1103
            LLARGWHS+QP +H        SLVFL PGI  FS+  L KG  Y+DSV+DVL+KV S+P
Sbjct: 381  LLARGWHSEQPNDHGFAAASRHSLVFLIPGIEKFSRRKLVKGDHYFDSVSDVLNKVASDP 440

Query: 1102 ELLELDTGKNEGQKTEE-SEWFKETT-KQENLP-EKRHCYLQPPTASSNMDVVRFTVVDT 932
             LL+LD G+++G  ++E + W  +T   Q N P ++RHCYL+P T S   + + FTVVDT
Sbjct: 441  TLLDLDIGEDKGDGSKEGTTWSNKTNLNQGNFPGQQRHCYLKPRTPSRTSNAMMFTVVDT 500

Query: 931  SLAIGKSSRVTELRTLPKNILQILTLSEDSN------------------------NCTSV 824
            SLA G+S RV ELR+LP  ++ I T   DS                         N T++
Sbjct: 501  SLATGESKRVRELRSLPVGLMSICTSRSDSEDSESDSLKVPAGEPDSSENLCSDMNGTTM 560

Query: 823  VSYNKSDFAHDIYVDQEEKNTITNPEIXXXXXXXXXXXXSEQLIQISGLQRNEFCNDHKQ 644
                K+D    ++ D+E+                     ++   +I   Q+ + C D  Q
Sbjct: 561  TISTKNDLDKGVFSDRED----VEDNALKQSFRINGSGFAKVPEKIPEYQKADKC-DSMQ 615

Query: 643  TRKAVKNHLKQK---LNQNEPASVPKRQKTITACNNEEISSGKFG-----EDVHCCCSN- 491
            TRK +K    Q+    ++     V KRQ+ + AC++ + S G        +D   C    
Sbjct: 616  TRKRIKRQATQRGILCDRKLLDPVAKRQQRLIACDHTKTSCGTIDRHGSKQDEPGCAGEG 675

Query: 490  --IHDLNNKVGSLQDRFSVTSTTKESSPQSIGGTQDNGVHGLQNP----QFRILIDLNLP 329
                D   +V    +R S T +++ S   S   T  +   G  +P    Q R LIDLN+P
Sbjct: 676  DIREDFLFRVDPPMERLSATISSRGSPNISNESTLSSNSSGDDHPHEKLQTRALIDLNMP 735

Query: 328  QQPVEFEDGIFITDLANMQNDIKSKEQQDDFCAPKASLYSND--PEHPANMNSRRQSTRN 155
              P + E    +  +  +++D K+  Q  DF   K S  + D  P+   NMN RR STRN
Sbjct: 736  V-PHDAETEPLMMGVTEVKDD-KASRQTKDFGMLKISTSACDSTPQQSPNMNLRRHSTRN 793

Query: 154  RPPTARALEALANGYLTASNRRK-KDSALHETKRSRPCR 41
            RP T +ALEALA G+L+   +RK +D    + + SRP R
Sbjct: 794  RPLTTKALEALACGFLSIKQKRKSRDVFSLDNQMSRPSR 832


>emb|CAN63568.1| hypothetical protein VITISV_043429 [Vitis vinifera]
          Length = 885

 Score =  199 bits (506), Expect = 1e-48
 Identities = 154/432 (35%), Positives = 225/432 (52%), Gaps = 53/432 (12%)
 Frame = -3

Query: 1255 LLARGWHSDQPKNHS--------LVFLTPGISNFSKG-LRKGKQYYDSVTDVLSKVGSEP 1103
            LLARGWHS+QP+ H+        LVFL PG+  FS+  L KG  Y+DSV+DVLSKV S+P
Sbjct: 429  LLARGWHSEQPRGHNYAAGSKQPLVFLIPGVKKFSRRKLVKGSHYFDSVSDVLSKVASDP 488

Query: 1102 ELLELDTGKNEGQKTEESEWFKETTK--QENLPEKRH-CYLQPPTASSNMDVVRFTVVDT 932
             LLE +   +EG K++E       TK  +++L ++RH CYLQP T + N+D V+FTVVDT
Sbjct: 489  GLLEFEIEADEGNKSKEESGLTNETKLDKDDLSDQRHHCYLQPRTPNRNVDXVKFTVVDT 548

Query: 931  SLAIGKSSRVTELRTLPKNILQILTLS----EDSNNCTSVVSYNKSDFAHDIYVDQEEKN 764
            SLA G   +  E+R+LP       T S    E+  + +  +  ++S+  ++++++QEE N
Sbjct: 549  SLANGAKYKEKEVRSLPFESSNTSTSSSHFEENDEDTSEELVVDESNSGYNMFLNQEETN 608

Query: 763  TITNPEIXXXXXXXXXXXXSEQLIQISGLQRNE-----------------FCNDHKQTRK 635
                 +I            SE      G+  N+                   N  KQ+R 
Sbjct: 609  YSNPTKIIFEGRVCSGSKDSEISAVNQGIPTNDPDSTSLPAKVPKSQNTNMYNAKKQSR- 667

Query: 634  AVKNHLKQKLN---QNEPASVPKRQKTITACNNEEISSG--------KFGEDVHCCCSNI 488
            A K  L +K+     N  A V KR++ +TAC+  E S          +  ++    C   
Sbjct: 668  APKCXLGRKMKPDMSNYLAPVTKRRRRLTACSRAETSQSTITFLVGPELKQEESGGCIGK 727

Query: 487  HD----LNNKVGSLQDRF-SVTSTTKESSPQSIGGTQDNGVHGLQNP----QFRILIDLN 335
            HD    ++ KV  L ++  S +S+ K+S      G   +   G ++P    QFR +IDLN
Sbjct: 728  HDSDEIIHCKVVPLTEKLCSSSSSCKDSRIDGREGMLSSNCSGAEHPREELQFRTMIDLN 787

Query: 334  LPQQPVEFEDGIFITDLANMQNDIKSKEQQDDFCAPKASLYSNDPEHPANMNSRRQSTRN 155
            LP  P + E G  +   ++ + D ++ +Q DD  A K S+   + E P NMNSRRQSTRN
Sbjct: 788  LPVLP-DAETGEPVLVASSERQDDQASKQADDPNALKTSIGVANSEQPPNMNSRRQSTRN 846

Query: 154  RPPTARALEALA 119
            RP T +ALEALA
Sbjct: 847  RPLTTKALEALA 858


>ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254594 [Vitis vinifera]
          Length = 954

 Score =  188 bits (477), Expect = 3e-45
 Identities = 152/457 (33%), Positives = 230/457 (50%), Gaps = 58/457 (12%)
 Frame = -3

Query: 1255 LLARGWHSDQPKN-------HSLVFLTPGISNFSKG-LRKGKQYYDSVTDVLSKVGSEPE 1100
            LLARGWHS+QPKN       HSLVFL PG+  FS+  L KG  Y+DS++DVLSKV SEP+
Sbjct: 474  LLARGWHSEQPKNEGCASSKHSLVFLVPGVKKFSRRKLVKGDHYFDSISDVLSKVASEPK 533

Query: 1099 LLELDTGKNEGQKTEESE-WFKETTKQENLPE--KRHCYLQPPTASSNMDVVRFTVVDTS 929
            +LEL+  +      +E   W  E     + P   +RHCYL+P  ++ N+++++FTVVDTS
Sbjct: 534  ILELEDEETGVSSCKEGNGWVPEAKLDNDDPSDHQRHCYLKPRVSTCNLNLMKFTVVDTS 593

Query: 928  LAIG-KSSRVTELRTLPKNILQI-----LTLSEDSNNCTSVVSYNKSDFAHDIYVDQEEK 767
            LA G KSS+V EL++LP   L+      LT S  +   +S  S ++SD A D+ ++ ++ 
Sbjct: 594  LACGEKSSKVRELKSLPVESLETINNSNLTSSRVTGGDSSEDSQDESDSA-DMSLNGQKN 652

Query: 766  NT-------ITNPEIXXXXXXXXXXXXSEQLIQISGLQRNEFCNDHKQTRKAVKNHLKQK 608
             T       I++               +++L++ +   +N   +D K  R+ +K+   ++
Sbjct: 653  TTNSNHAKAISHSSSLTQRVSTNSPDAAKKLVE-NNQDQNTNTSDDKHLRRNIKHQFSRR 711

Query: 607  L---NQNEPASVPKRQKTITACNNEEISSGKF--------GEDVHCCCSNIHDLNNKVG- 464
                + N  A + KR++ +TAC   E S  +          E  HC   +     N V  
Sbjct: 712  TKSGHSNYLAPLIKRRR-LTACAKAETSRAESLSVGPLSKQEKSHCMLGSSEASKNDVSQ 770

Query: 463  ---SLQDRFSVTSTTKESSPQS----IGGTQ---DNGVHGLQNPQFRILIDLNLPQQPVE 314
               S +++ S  S++   SP+     +GGT    D        PQ R LIDLNLPQ P +
Sbjct: 771  EGPSPREKASSISSSDGGSPEDETVILGGTSVGMDLSHEKNDKPQTRPLIDLNLPQVPSD 830

Query: 313  FEDGIFITDLANMQNDIKSKEQQDDFC------------APKASLYSNDPEHPANMNSRR 170
             E+G  +    N++N   +       C            A + S+ +   E    M  +R
Sbjct: 831  SENGERLA--TNVENSQVASTANGSCCSSDRNILMEDSKALRTSVNAGSAEEQPIMKPQR 888

Query: 169  QSTRNRPPTARALEALANGYLTASNRRKKDSALHETK 59
            QSTRNRP T +ALEALA+G+L    +RK   +  E K
Sbjct: 889  QSTRNRPLTTKALEALASGFLNTRRKRKGTESTRERK 925


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