BLASTX nr result

ID: Bupleurum21_contig00022197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022197
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloropla...   251   2e-64
ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochond...   251   2e-64
ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloropla...   233   4e-59
ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putat...   223   6e-56
ref|XP_002313020.1| inner membrane protein [Populus trichocarpa]...   197   3e-48

>ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 366

 Score =  251 bits (640), Expect = 2e-64
 Identities = 129/263 (49%), Positives = 179/263 (68%)
 Frame = +3

Query: 3   FVGFYIPHGGSVYWVANSVLTLIQNLVIANASVRNYFGLPLKDGPAKMLTKDQNIQVDDV 182
           F+G+ IP G  VYWV NS  T IQ L + + +VR+  GLP +D P    T    ++  + 
Sbjct: 108 FIGYCIPQGSLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPSRDAPVGTTT----LRETNN 163

Query: 183 IGVNLVGTSMKQPKKVSVKDLSPKDLVNLSIQMLAKGDXXXXXXXXXXXXNKDPEHIRSL 362
            G   + T+ K  KK+SV+ LSPK+L+ LS+Q+L+KG             NK+PE++R+L
Sbjct: 164 PGKIPLETTTKW-KKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRAL 222

Query: 363 IILGQTLLQEGLLAEAVEHLDHAVSNILLTGPPSKVEEIDQLILASMWCGVAYIRNGKNA 542
           +++GQTLLQ    AEA  +L+ A+S + L+G P++VE +D LILAS W GVA+IR GK  
Sbjct: 223 VVMGQTLLQNAQPAEATVYLERAISKLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMV 282

Query: 543 EGILHLERIGHMNEPAEAKSKAHYYDGLLMLASALVNEGRKPDAEKYLRKAVAYNSAYNV 722
           EGI HLER+ ++ EP E KSKAHYYDGL++LASAL NEGRK +A KYL+ AVAYN AY  
Sbjct: 283 EGIAHLERVANLKEPEEPKSKAHYYDGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKE 342

Query: 723 YLEQLQNEDDDSVSDLVNNKRKD 791
           YL+Q ++++D  V DLV+++R D
Sbjct: 343 YLDQCEDDNDKLVGDLVSSRRGD 365


>ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochondrial-like [Cucumis
            sativus]
          Length = 573

 Score =  251 bits (640), Expect = 2e-64
 Identities = 129/263 (49%), Positives = 179/263 (68%)
 Frame = +3

Query: 3    FVGFYIPHGGSVYWVANSVLTLIQNLVIANASVRNYFGLPLKDGPAKMLTKDQNIQVDDV 182
            F+G+ IP G  VYWV NS  T IQ L + + +VR+  GLP +D P    T    ++  + 
Sbjct: 315  FIGYCIPQGSLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPSRDAPVGTTT----LRETNN 370

Query: 183  IGVNLVGTSMKQPKKVSVKDLSPKDLVNLSIQMLAKGDXXXXXXXXXXXXNKDPEHIRSL 362
             G   + T+ K  KK+SV+ LSPK+L+ LS+Q+L+KG             NK+PE++R+L
Sbjct: 371  PGKIPLETTTKW-KKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRAL 429

Query: 363  IILGQTLLQEGLLAEAVEHLDHAVSNILLTGPPSKVEEIDQLILASMWCGVAYIRNGKNA 542
            +++GQTLLQ    AEA  +L+ A+S + L+G P++VE +D LILAS W GVA+IR GK  
Sbjct: 430  VVMGQTLLQNAQPAEATVYLERAISKLFLSGHPTEVEGVDLLILASQWAGVAFIRQGKMV 489

Query: 543  EGILHLERIGHMNEPAEAKSKAHYYDGLLMLASALVNEGRKPDAEKYLRKAVAYNSAYNV 722
            EGI HLER+ ++ EP E KSKAHYYDGL++LASAL NEGRK +A KYL+ AVAYN AY  
Sbjct: 490  EGIAHLERVANLKEPEEPKSKAHYYDGLVLLASALYNEGRKAEATKYLKSAVAYNPAYKE 549

Query: 723  YLEQLQNEDDDSVSDLVNNKRKD 791
            YL+Q ++++D  V DLV+++R D
Sbjct: 550  YLDQCEDDNDKLVGDLVSSRRGD 572


>ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloroplastic [Vitis vinifera]
            gi|297735304|emb|CBI17666.3| unnamed protein product
            [Vitis vinifera]
          Length = 572

 Score =  233 bits (595), Expect = 4e-59
 Identities = 128/281 (45%), Positives = 177/281 (62%), Gaps = 18/281 (6%)
 Frame = +3

Query: 3    FVGFYIPHGGSVYWVANSVLTLIQNLVIANASVRNYFGLPLKDGP---AKML-------- 149
            F GFYIP G  VYWV NS L+ IQ L I + +VR   GLP K  P   AK +        
Sbjct: 293  FTGFYIPQGSLVYWVTNSSLSAIQQLTIRHPTVRAKLGLPDKQAPNAAAKEMHTPGEGSL 352

Query: 150  ---TKDQNIQVDDVIGVNLVGTSMKQPKK----VSVKDLSPKDLVNLSIQMLAKGDXXXX 308
               TK Q I  + V    L G     P++    + ++ LSP+DL+ LS+Q+L+KGD    
Sbjct: 353  GPPTKQQYISPESVSPQELPGIKSMYPRRKQHQIPIESLSPRDLIALSVQILSKGDKDGA 412

Query: 309  XXXXXXXXNKDPEHIRSLIILGQTLLQEGLLAEAVEHLDHAVSNILLTGPPSKVEEIDQL 488
                    +KDP ++R+L+++GQTLLQ+  + EA ++L+ AV+ + L G P++ +E+D +
Sbjct: 413  IPFIRMALDKDPNYVRALVVMGQTLLQKEQVEEASDYLERAVTKLFLIGHPTE-DEVDLM 471

Query: 489  ILASMWCGVAYIRNGKNAEGILHLERIGHMNEPAEAKSKAHYYDGLLMLASALVNEGRKP 668
            ILAS W G A +R GK AEG++HLERI ++ EP E KSKAHY+DGLL+LAS L  EGR  
Sbjct: 472  ILASQWAGAACVRQGKTAEGLVHLERIANLKEPDEPKSKAHYFDGLLLLASTLYREGRNA 531

Query: 669  DAEKYLRKAVAYNSAYNVYLEQLQNEDDDSVSDLVNNKRKD 791
            +A K+LRKA AYN AY  YLE+ + E D  V+DLV+++R D
Sbjct: 532  EAAKHLRKAAAYNPAYKEYLEECERE-DGFVNDLVSSRRGD 571


>ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
            gi|223548578|gb|EEF50069.1| cytochrome oxidase biogenesis
            protein, putative [Ricinus communis]
          Length = 548

 Score =  223 bits (568), Expect = 6e-56
 Identities = 116/266 (43%), Positives = 169/266 (63%), Gaps = 3/266 (1%)
 Frame = +3

Query: 3    FVGFYIPHGGSVYWVANSVLTLIQNLVIANASVRNYFGLPLKDGPAKMLTKDQNIQVDDV 182
            F+G+ IP G  VYWV NS L++IQ + + + +VR   GLP KD PA     ++       
Sbjct: 292  FIGYCIPQGSLVYWVTNSSLSVIQQMSLKHPAVRAKLGLPAKDAPAASADSEE------- 344

Query: 183  IGVNLVGTSMKQPKK---VSVKDLSPKDLVNLSIQMLAKGDXXXXXXXXXXXXNKDPEHI 353
              +     S+  P K   V V++L+PK L+ +S+Q+L+                KDP +I
Sbjct: 345  --MGSPQASLDAPSKNGKVPVENLNPKQLLAISVQLLSNQHRERAIPLLQLALQKDPNYI 402

Query: 354  RSLIILGQTLLQEGLLAEAVEHLDHAVSNILLTGPPSKVEEIDQLILASMWCGVAYIRNG 533
             +L+++GQTLLQ+ + AEA +HL+ A+S + L G P++V+++D LILAS W GVA IR G
Sbjct: 403  GALVVMGQTLLQKEMYAEARDHLERAISKLFLAGNPTEVKDVDLLILASQWAGVACIRQG 462

Query: 534  KNAEGILHLERIGHMNEPAEAKSKAHYYDGLLMLASALVNEGRKPDAEKYLRKAVAYNSA 713
            +NAEG+ H ER+ ++ EP + K K HY+D L+ LASAL NEGRK +A  YLR AVA+N A
Sbjct: 463  ENAEGVAHFERVANLEEPEDPKCKVHYFDTLIFLASALYNEGRKAEAANYLRLAVAFNPA 522

Query: 714  YNVYLEQLQNEDDDSVSDLVNNKRKD 791
            +   LEQ +N D++  SDLVN++R+D
Sbjct: 523  FKELLEQCEN-DEEFGSDLVNSRRRD 547


>ref|XP_002313020.1| inner membrane protein [Populus trichocarpa]
           gi|222849428|gb|EEE86975.1| inner membrane protein
           [Populus trichocarpa]
          Length = 499

 Score =  197 bits (502), Expect = 3e-48
 Identities = 113/250 (45%), Positives = 151/250 (60%), Gaps = 6/250 (2%)
 Frame = +3

Query: 3   FVGFYIPHGGSVYWVANSVLTLIQNLVIANASVRNYFGLPLKDGPAKMLTKDQNIQVDDV 182
           F+G+ IP G  VYWV NS LT IQ + +    VR   GL  KD P               
Sbjct: 263 FIGYCIPQGSLVYWVTNSSLTAIQQVSLKLPVVRAKLGLLDKDFPKA-----------PA 311

Query: 183 IGVNLVGTSMKQPKKVSVKDLSPKDL------VNLSIQMLAKGDXXXXXXXXXXXXNKDP 344
           +   +V   ++   KVS ++LSP +L      V LS+++L+ G              KD 
Sbjct: 312 LSAEMVAHELR---KVSPENLSPHELLVVSGAVQLSVKLLSSGHRARAIPLLQMALEKDS 368

Query: 345 EHIRSLIILGQTLLQEGLLAEAVEHLDHAVSNILLTGPPSKVEEIDQLILASMWCGVAYI 524
            H+++LI++GQ  LQEGL AEA +HL+ A+SN++LTG P+  E++D LILAS W GVA I
Sbjct: 369 GHVKALIVMGQARLQEGLHAEATDHLERAISNLILTGHPT-AEDVDHLILASQWAGVACI 427

Query: 525 RNGKNAEGILHLERIGHMNEPAEAKSKAHYYDGLLMLASALVNEGRKPDAEKYLRKAVAY 704
           R GKNAEGI+HLERI  + EP + KSKAHY+DGLL+LASAL  E R  +A KYLR  VAY
Sbjct: 428 RQGKNAEGIMHLERITSLEEPEDPKSKAHYFDGLLLLASALSKEDRNAEAVKYLRLVVAY 487

Query: 705 NSAYNVYLEQ 734
           + +   +L+Q
Sbjct: 488 DPSRKEFLDQ 497


Top