BLASTX nr result

ID: Bupleurum21_contig00022173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022173
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              94   9e-18
emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]    88   6e-16
emb|CAN81205.1| hypothetical protein VITISV_020910 [Vitis vinifera]    88   8e-16
emb|CAN74048.1| hypothetical protein VITISV_017189 [Vitis vinifera]    87   1e-15
dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] gi|109659801|...    87   1e-15

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 12/154 (7%)
 Frame = -2

Query: 426  LIAGLILSAHLQIKALEACSDSQLVVKQVIGEYTTKDATLSKYLVKVKSLIKEFDHFEIS 247
            LIAGL L+A +QI  + A +DSQL+  Q+ GEY  K+  +  YL  V+ + K+F++F++S
Sbjct: 1304 LIAGLRLAAGMQITTIHAFTDSQLIAGQLSGEYEAKNEKMDAYLKIVQLMTKDFENFKLS 1363

Query: 246  QIDRTDNSSADQLSRLSQDAKDQIEGSVYFQELDTPSIIAEASLVVITA----------- 100
            +I R DN+ AD L+ L+  +   +   +  + +D PSI +  ++ ++             
Sbjct: 1364 KIPRGDNAPADALAALALTSDSDLRRIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPAD 1423

Query: 99   -ENWMTPIITYL*NGNLPSDPLEAKKLRFKSANY 1
              +W   I  YL +G LPSD   A++LR K+A Y
Sbjct: 1424 PTDWRVEIRDYLSDGTLPSDKWTARRLRIKAAKY 1457


>emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]
          Length = 987

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 5/148 (3%)
 Frame = -2

Query: 429 SLIAGLILSAHLQIKALEACSDSQLVVKQVIGEYTTKDATLSKYLVKVKSLIKEFDHFEI 250
           ++++GL L+  L +  L   SDSQLVVK V  EY TKDA +++YL KV++ +++F  + I
Sbjct: 500 AILSGLDLALALSVSKLRVFSDSQLVVKHVQEEYETKDARMARYLAKVRNTLQQFTEWTI 559

Query: 249 SQIDRTDNSSADQLSRLSQD--AKDQIEGSVYFQELDTPSIIAEASLV---VITAENWMT 85
            +I R DN  AD L+ ++     K+ I   ++ Q   + S I+  + +       + WM 
Sbjct: 560 EKIKRADNRRADALAGIAASLLIKEAILLPIHVQTNPSVSEISACNTIEAPQADGQEWMY 619

Query: 84  PIITYL*NGNLPSDPLEAKKLRFKSANY 1
            I  Y+  G LP DP +A K+R ++A +
Sbjct: 620 DITEYIRTGTLPGDPKQAHKVRVQAARF 647


>emb|CAN81205.1| hypothetical protein VITISV_020910 [Vitis vinifera]
          Length = 993

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
 Frame = -2

Query: 429 SLIAGLILSAHLQIKALEACSDSQLVVKQVIGEYTTKDATLSKYLVKVKSLIKEFDHFEI 250
           ++++GL L+  L I  L   SDSQLVV+ V  EY  KDA +++YL KV+S +++F  + I
Sbjct: 466 AILSGLDLALALSISKLRIYSDSQLVVRHVQKEYEAKDARMARYLAKVRSTLQQFTEWTI 525

Query: 249 SQIDRTDNSSADQLSRL--SQDAKDQIEGSVYFQELDTPSIIAEASLVVITA-----ENW 91
            +I RTDN  AD L+ +  S   ++ I   ++ Q    PS+   ++   I A     + W
Sbjct: 526 EKIKRTDNGRADALAGIAASLPIREAILLPIHVQ--TNPSVTENSTCNTIEADQADDQEW 583

Query: 90  MTPIITYL*NGNLPSDPLEAKKLRFKSANY 1
              I  YL  G LP DP +A K+R ++A +
Sbjct: 584 THDIAEYLRTGTLPEDPKQAHKIRVQAARF 613


>emb|CAN74048.1| hypothetical protein VITISV_017189 [Vitis vinifera]
          Length = 887

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
 Frame = -2

Query: 429 SLIAGLILSAHLQIKALEACSDSQLVVKQVIGEYTTKDATLSKYLVKVKSLIKEFDHFEI 250
           ++++GL L+  L +  L   SDSQLVV+ V  EY  KDA +++YL KV++ +++F  + I
Sbjct: 429 AILSGLDLALALSVSKLRIYSDSQLVVRHVQKEYEAKDARMARYLAKVRNTLQQFTEWTI 488

Query: 249 SQIDRTDNSSADQLSRL--SQDAKDQIEGSVYFQELDTPSIIAEASLVVITA-----ENW 91
            +I RTDN  AD L+ +  S   K+ I   +Y Q    PSI   ++   I A     + W
Sbjct: 489 KKIKRTDNGRADALAGIAASLPIKEVILLPIYVQ--TNPSIAEISTCNTIEANQADGQEW 546

Query: 90  MTPIITYL*NGNLPSDPLEAKKLRFKSANY 1
              I  YL  G LP DP +A K+R ++A +
Sbjct: 547 TYNIAEYLRTGTLPGDPKQAHKVRVQAARF 576


>dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] gi|109659801|dbj|BAE96746.1|
           GAG-POL precursor [Vitis vinifera]
           gi|109659805|dbj|BAE96749.1| GAG-POL precursor [Vitis
           vinifera] gi|221271542|dbj|BAH15077.1| GAG-POL precursor
           [Vitis vinifera]
          Length = 1027

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 8/151 (5%)
 Frame = -2

Query: 429 SLIAGLILSAHLQIKALEACSDSQLVVKQVIGEYTTKDATLSKYLVKVKSLIKEFDHFEI 250
           ++++GL L+  L +  L   SDSQLVVK V  EY  KDA +++YL KV++ +++F  + I
Sbjct: 500 AILSGLDLALALSVSKLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTI 559

Query: 249 SQIDRTDNSSADQLSRL--SQDAKDQIEGSVYFQELDTPSIIAEASLVVITA------EN 94
            +I R DN  AD L+ +  S   K+ I   ++ Q   T   ++E S+   T       + 
Sbjct: 560 EKIKRADNRRADALAGIAASLSIKEAILLPIHVQ---TNPSVSEISICSTTEAPQADDQE 616

Query: 93  WMTPIITYL*NGNLPSDPLEAKKLRFKSANY 1
           WM  I  Y+  G LP DP +A K+R ++A +
Sbjct: 617 WMNDITEYIRTGTLPGDPKQAHKVRVQAARF 647


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