BLASTX nr result

ID: Bupleurum21_contig00022170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022170
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ16529.1| TMV-associated RING finger protein [Nicotiana ta...   185   3e-45
emb|CBI26992.3| unnamed protein product [Vitis vinifera]              184   6e-45
ref|XP_002279535.1| PREDICTED: uncharacterized protein LOC100255...   184   6e-45
ref|XP_002527005.1| zinc finger protein, putative [Ricinus commu...   177   6e-43
ref|XP_002314849.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>dbj|BAJ16529.1| TMV-associated RING finger protein [Nicotiana tabacum]
          Length = 1233

 Score =  185 bits (470), Expect = 3e-45
 Identities = 88/113 (77%), Positives = 103/113 (91%)
 Frame = -3

Query: 340 QEHAEEECEFDKFRILIESVERAGANSSSAEFYSELCSKADHLMGSIQKHFQNEEVQVLP 161
           QEHAEEE EFDKFR LIESV+ AG+NS+S EFYS+LCS+ADH+M ++++HF NEE QVLP
Sbjct: 375 QEHAEEENEFDKFRCLIESVQSAGSNSTSVEFYSKLCSQADHIMETVERHFCNEEAQVLP 434

Query: 160 LARQHFSPRKQRELLYQSLCVMPLRLLESVLPWLVGSLNEVEARSFLYNMHMA 2
           LAR+HFSP++QRELLYQSLCVMPLRL+E VLPWLVGSL+E EARSFL NMHMA
Sbjct: 435 LARKHFSPKRQRELLYQSLCVMPLRLIECVLPWLVGSLSEEEARSFLQNMHMA 487



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/110 (33%), Positives = 54/110 (49%)
 Frame = -3

Query: 337 EHAEEECEFDKFRILIESVERAGANSSSAEFYSELCSKADHLMGSIQKHFQNEEVQVLPL 158
           EH  E   FD    L++S  +     S   +  EL S    L  SI +H   EE QVLPL
Sbjct: 122 EHEGEGVLFDHLFALLDSDMQ-----SEESYRRELASCTGALQTSISQHMSKEEEQVLPL 176

Query: 157 ARQHFSPRKQRELLYQSLCVMPLRLLESVLPWLVGSLNEVEARSFLYNMH 8
             + FS  +Q  L++Q LC +P+ ++   LPWL  S++  E +     +H
Sbjct: 177 LMEKFSFEEQASLVWQFLCSIPVNMMAEFLPWLSSSISADECKDMHKFLH 226


>emb|CBI26992.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  184 bits (467), Expect = 6e-45
 Identities = 88/113 (77%), Positives = 102/113 (90%)
 Frame = -3

Query: 340 QEHAEEECEFDKFRILIESVERAGANSSSAEFYSELCSKADHLMGSIQKHFQNEEVQVLP 161
           QEHAEEE +FDK R LIES++ AGANSSSAEFY++LCS+AD +M +IQKHF NEEVQVLP
Sbjct: 369 QEHAEEESQFDKLRCLIESIQSAGANSSSAEFYTKLCSQADQIMDTIQKHFHNEEVQVLP 428

Query: 160 LARQHFSPRKQRELLYQSLCVMPLRLLESVLPWLVGSLNEVEARSFLYNMHMA 2
           LAR+HFSP++QRELLYQSLCVMPLRL+E VLPWLVGSL+E  ARSFL NMH+A
Sbjct: 429 LARKHFSPKRQRELLYQSLCVMPLRLIECVLPWLVGSLDEEAARSFLQNMHLA 481


>ref|XP_002279535.1| PREDICTED: uncharacterized protein LOC100255880 [Vitis vinifera]
          Length = 1237

 Score =  184 bits (467), Expect = 6e-45
 Identities = 88/113 (77%), Positives = 102/113 (90%)
 Frame = -3

Query: 340 QEHAEEECEFDKFRILIESVERAGANSSSAEFYSELCSKADHLMGSIQKHFQNEEVQVLP 161
           QEHAEEE +FDK R LIES++ AGANSSSAEFY++LCS+AD +M +IQKHF NEEVQVLP
Sbjct: 369 QEHAEEESQFDKLRCLIESIQSAGANSSSAEFYTKLCSQADQIMDTIQKHFHNEEVQVLP 428

Query: 160 LARQHFSPRKQRELLYQSLCVMPLRLLESVLPWLVGSLNEVEARSFLYNMHMA 2
           LAR+HFSP++QRELLYQSLCVMPLRL+E VLPWLVGSL+E  ARSFL NMH+A
Sbjct: 429 LARKHFSPKRQRELLYQSLCVMPLRLIECVLPWLVGSLDEEAARSFLQNMHLA 481


>ref|XP_002527005.1| zinc finger protein, putative [Ricinus communis]
           gi|223533640|gb|EEF35377.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 1306

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/113 (73%), Positives = 101/113 (89%)
 Frame = -3

Query: 340 QEHAEEECEFDKFRILIESVERAGANSSSAEFYSELCSKADHLMGSIQKHFQNEEVQVLP 161
           +EHAEEE +FDK R LIES++ AGAN+S  EFY++LC++ADH+M SIQKHFQNEE QVLP
Sbjct: 380 EEHAEEEIQFDKLRCLIESIQSAGANTSHTEFYTKLCTQADHIMDSIQKHFQNEEAQVLP 439

Query: 160 LARQHFSPRKQRELLYQSLCVMPLRLLESVLPWLVGSLNEVEARSFLYNMHMA 2
           LAR+HFS ++QRELLYQSLCVMPL+L+E VLPWLVGSL+E EA+SFL NM+MA
Sbjct: 440 LARKHFSAKRQRELLYQSLCVMPLKLIECVLPWLVGSLSEEEAKSFLQNMYMA 492


>ref|XP_002314849.1| predicted protein [Populus trichocarpa] gi|222863889|gb|EEF01020.1|
           predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/113 (72%), Positives = 99/113 (87%)
 Frame = -3

Query: 340 QEHAEEECEFDKFRILIESVERAGANSSSAEFYSELCSKADHLMGSIQKHFQNEEVQVLP 161
           QEHAEEE +FDK R LIES++ AGA +S  +FY++LCS+AD +M +IQKHFQNEEVQVLP
Sbjct: 357 QEHAEEEVQFDKLRCLIESIQNAGAYTSLTDFYTKLCSQADQIMDNIQKHFQNEEVQVLP 416

Query: 160 LARQHFSPRKQRELLYQSLCVMPLRLLESVLPWLVGSLNEVEARSFLYNMHMA 2
           LAR+HFS ++QRELLYQSLCVMPL+L+E VLPWLVGSL+E  ARSFL NM+MA
Sbjct: 417 LARKHFSAKRQRELLYQSLCVMPLKLIECVLPWLVGSLSEEAARSFLQNMYMA 469


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