BLASTX nr result

ID: Bupleurum21_contig00022161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022161
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin...   240   5e-61
emb|CBI19826.3| unnamed protein product [Vitis vinifera]              225   2e-56
gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]        212   1e-52
ref|XP_004167632.1| PREDICTED: zinc finger CCCH domain-containin...   204   4e-50
ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containin...   204   4e-50

>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
           vinifera]
          Length = 457

 Score =  240 bits (613), Expect = 5e-61
 Identities = 151/336 (44%), Positives = 184/336 (54%), Gaps = 4/336 (1%)
 Frame = -1

Query: 998 MRGLQKSKRVSWASDVNLCQVKLFLSEESPSLIG---LSGQDHLQAKESWSPYTTGAGHD 828
           MRGLQKSKRVSW SDVNLCQV+LFLSE+SPS +G   L  QDHLQAK SW  ++ G G D
Sbjct: 1   MRGLQKSKRVSWPSDVNLCQVRLFLSEDSPSQVGQVGLGAQDHLQAKTSWLLHSNGMGSD 60

Query: 827 DNLPPGFEESHPANVLHNKLSQIPIIQWQCPAKFAYDPIWQVVDGDESNEVKSQYEREMR 648
           DNLPPGFE +HPAN L NKLSQIP+I W+CP KF  +  WQVV G+ESNEV+ Q +REMR
Sbjct: 61  DNLPPGFEGAHPANQLKNKLSQIPLITWRCPPKFVLNFTWQVVAGEESNEVEVQKQREMR 120

Query: 647 VLEAVYPRPSAIPPNPSLLIGVDASYEPDQNPPLIPITPIEDDDAAVAADTSFDNVLPNT 468
           VLEAVYPRPSAIPPNPS+ I  +     DQ   LIPI P+ED++AA+  + S D V P  
Sbjct: 121 VLEAVYPRPSAIPPNPSVSIDGEDMDNDDQKILLIPIVPVEDEEAAL--EMSADTVAPIN 178

Query: 467 DLVSSXXXXXXXXXXXXXXXXXXXQITHXXXXXXXXXXXXXXXXXXXXXXLRSQSNPTIS 288
             +SS                                               S SN    
Sbjct: 179 IPMSS-----------------------------------QSLLLPPGIPSASSSNAPNI 203

Query: 287 INPSPNFIPSAVRALGVEPHAVTAAYNALSAMMANSGQAXXXXXXXXXXXXXXXXLIEEL 108
            NP  N   +A    GVEP  V AA  A +A+M ++ Q                 +IE +
Sbjct: 204 PNPPANENVAAGMVPGVEPDVVAAASAAFTAVMRSNEQGNLIDHDLLIKILSNPKIIERI 263

Query: 107 GSIN-GSSATTQNLPNNRLQGNTLTESPLVHLSRTE 3
            +    SS+  Q +PN RL    L++ P  H+SR E
Sbjct: 264 VTDQVVSSSNPQAVPNQRLPPIALSDQPPGHVSRVE 299


>emb|CBI19826.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  225 bits (573), Expect = 2e-56
 Identities = 112/167 (67%), Positives = 130/167 (77%), Gaps = 3/167 (1%)
 Frame = -1

Query: 998 MRGLQKSKRVSWASDVNLCQVKLFLSEESPSLIG---LSGQDHLQAKESWSPYTTGAGHD 828
           MRGLQKSKRVSW SDVNLCQV+LFLSE+SPS +G   L  QDHLQAK SW  ++ G G D
Sbjct: 1   MRGLQKSKRVSWPSDVNLCQVRLFLSEDSPSQVGQVGLGAQDHLQAKTSWLLHSNGMGSD 60

Query: 827 DNLPPGFEESHPANVLHNKLSQIPIIQWQCPAKFAYDPIWQVVDGDESNEVKSQYEREMR 648
           DNLPPGFE +HPAN L NKLSQIP+I W+CP KF  +  WQVV G+ESNEV+ Q +REMR
Sbjct: 61  DNLPPGFEGAHPANQLKNKLSQIPLITWRCPPKFVLNFTWQVVAGEESNEVEVQKQREMR 120

Query: 647 VLEAVYPRPSAIPPNPSLLIGVDASYEPDQNPPLIPITPIEDDDAAV 507
           VLEAVYPRPSAIPPNPS+ I  +     DQ   LIPI P+ED++AA+
Sbjct: 121 VLEAVYPRPSAIPPNPSVSIDGEDMDNDDQKILLIPIVPVEDEEAAL 167


>gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]
          Length = 441

 Score =  212 bits (540), Expect = 1e-52
 Identities = 108/175 (61%), Positives = 130/175 (74%)
 Frame = -1

Query: 998 MRGLQKSKRVSWASDVNLCQVKLFLSEESPSLIGLSGQDHLQAKESWSPYTTGAGHDDNL 819
           MRG  K KRVSWASDVNLCQVKLFL EESPS +GLS QDHLQAK SW  +++G G DD L
Sbjct: 1   MRGSHKLKRVSWASDVNLCQVKLFLLEESPSQVGLSAQDHLQAKASWLSHSSGTGSDDIL 60

Query: 818 PPGFEESHPANVLHNKLSQIPIIQWQCPAKFAYDPIWQVVDGDESNEVKSQYEREMRVLE 639
           PPGFE ++ AN L   +SQIP+I+W+CP +   +  WQVV G+ES EV+ Q +RE+RVLE
Sbjct: 61  PPGFEGAYSANQLQINVSQIPLIKWRCPPRVVLNFTWQVVCGEESKEVEIQNQREIRVLE 120

Query: 638 AVYPRPSAIPPNPSLLIGVDASYEPDQNPPLIPITPIEDDDAAVAADTSFDNVLP 474
           AVYPRPSAIP NPS+L  V+ S   D  PP+IPIT IED+D  V  DTS  ++ P
Sbjct: 121 AVYPRPSAIPLNPSVLADVEDSGHNDVQPPVIPITSIEDED--VGVDTSSASMAP 173


>ref|XP_004167632.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Cucumis sativus]
          Length = 444

 Score =  204 bits (519), Expect = 4e-50
 Identities = 104/184 (56%), Positives = 129/184 (70%), Gaps = 2/184 (1%)
 Frame = -1

Query: 998 MRGLQKSKRVSWASDVNLCQVKLFLSEESPSLIGLSGQDHLQAKESWSPYTTGAG--HDD 825
           MRGL K KRVSWASD+NL QV+LF SE+ PS +GL  QDHLQAK SW  ++TG G   DD
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFSSEDCPSQVGLGAQDHLQAKASWLLHSTGLGLGSDD 60

Query: 824 NLPPGFEESHPANVLHNKLSQIPIIQWQCPAKFAYDPIWQVVDGDESNEVKSQYEREMRV 645
            LPPGFE +HP N    KLSQIP+ QW+CP KF  +  W+VV G+ES EV  + +REMRV
Sbjct: 61  TLPPGFEVAHPENQWQIKLSQIPVNQWRCPPKFVLNLTWRVVVGEESQEVDVENQREMRV 120

Query: 644 LEAVYPRPSAIPPNPSLLIGVDASYEPDQNPPLIPITPIEDDDAAVAADTSFDNVLPNTD 465
            EAVYPR SAIPPNPS++   + +   D   PLIPITP+ED+D   A ++S D  +P + 
Sbjct: 121 FEAVYPRASAIPPNPSVVPDSERANVDDSRTPLIPITPVEDEDG--ATESSSDYAIPASG 178

Query: 464 LVSS 453
           L S+
Sbjct: 179 LTSA 182


>ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Cucumis sativus]
          Length = 441

 Score =  204 bits (519), Expect = 4e-50
 Identities = 104/184 (56%), Positives = 129/184 (70%), Gaps = 2/184 (1%)
 Frame = -1

Query: 998 MRGLQKSKRVSWASDVNLCQVKLFLSEESPSLIGLSGQDHLQAKESWSPYTTGAG--HDD 825
           MRGL K KRVSWASD+NL QV+LF SE+ PS +GL  QDHLQAK SW  ++TG G   DD
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFSSEDCPSQVGLGAQDHLQAKASWLLHSTGLGLGSDD 60

Query: 824 NLPPGFEESHPANVLHNKLSQIPIIQWQCPAKFAYDPIWQVVDGDESNEVKSQYEREMRV 645
            LPPGFE +HP N    KLSQIP+ QW+CP KF  +  W+VV G+ES EV  + +REMRV
Sbjct: 61  TLPPGFEVAHPENQWQIKLSQIPVNQWRCPPKFVLNLTWRVVVGEESQEVDVENQREMRV 120

Query: 644 LEAVYPRPSAIPPNPSLLIGVDASYEPDQNPPLIPITPIEDDDAAVAADTSFDNVLPNTD 465
            EAVYPR SAIPPNPS++   + +   D   PLIPITP+ED+D   A ++S D  +P + 
Sbjct: 121 FEAVYPRASAIPPNPSVVPDSERANVDDSRTPLIPITPVEDEDG--ATESSSDYAIPASG 178

Query: 464 LVSS 453
           L S+
Sbjct: 179 LTSA 182


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