BLASTX nr result

ID: Bupleurum21_contig00022153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022153
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450...    80   2e-13
emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera]    79   4e-13
emb|CBI23583.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|NP_171928.1| uncharacterized protein [Arabidopsis thaliana] ...    65   6e-09
ref|XP_002892209.1| hypothetical protein ARALYDRAFT_887595 [Arab...    65   6e-09

>ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like
           [Vitis vinifera]
          Length = 104

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
 Frame = -3

Query: 390 SDTAANISGNRRLSSRLQKRAPASIKITPAKDWNVAIXXXXXXXXXXXXXPI--RTAELK 217
           S T  +   NRR  SRLQ+RAP+S++I+PA DW VAI              +  RTAE+K
Sbjct: 5   SQTRPSAGVNRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRTAEVK 64

Query: 216 PNKEDSRSNNNWKLNESEKAPAAAVYKNWQHPAAPFCYNESSAMRPFM 73
           P KE+ R     ++ E EK     V+K WQHPAAPFCY  +S +R F+
Sbjct: 65  P-KEEPR-----QMKEGEK----PVFKKWQHPAAPFCYEPASFVRSFV 102


>emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera]
          Length = 104

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
 Frame = -3

Query: 390 SDTAANISGNRRLSSRLQKRAPASIKITPAKDWNVAIXXXXXXXXXXXXXPI--RTAELK 217
           S T  +   NRR  SRLQ+RAP+S++I+PA DW VAI              +  RTAE+K
Sbjct: 5   SQTRPSAGVNRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRTAEVK 64

Query: 216 PNKEDSRSNNNWKLNESEKAPAAAVYKNWQHPAAPFCYNESSAMRPFM 73
           P +E  ++       E EK     V+K WQHPAAPFCY  +S +R F+
Sbjct: 65  PKEEPRQT------KEGEK----PVFKKWQHPAAPFCYEPASFVRSFV 102


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = -3

Query: 363  NRRLSSRLQKRAPASIKITPAKDWNVAIXXXXXXXXXXXXXPI--RTAELKPNKEDSRSN 190
            NRR  SRLQ+RAP+S++I+PA DW VAI              +  RTAE+KP KE+ R  
Sbjct: 1197 NRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRTAEVKP-KEEPR-- 1253

Query: 189  NNWKLNESEKAPAAAVYKNWQHPAAPFCYNESSAMRPFM 73
               ++ E EK     V+K WQHPAAPFCY  +S +R F+
Sbjct: 1254 ---QMKEGEK----PVFKKWQHPAAPFCYEPASFVRSFV 1285


>ref|NP_171928.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2341040|gb|AAB70444.1| EST gb|H76414 comes from this
           gene [Arabidopsis thaliana] gi|38454052|gb|AAR20720.1|
           At1g04330 [Arabidopsis thaliana]
           gi|38603978|gb|AAR24732.1| At1g04330 [Arabidopsis
           thaliana] gi|332189564|gb|AEE27685.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 100

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/109 (42%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
 Frame = -3

Query: 393 MSDTAANISGN-RRLSSRLQKRAPASIKITPAK-DWNVAIXXXXXXXXXXXXXPIRTAEL 220
           MS TA NISG+  R SSRLQ+RAP  +KI P + +W VAI                +   
Sbjct: 1   MSSTARNISGSGNRKSSRLQRRAPPPLKINPCEANWKVAIPLLSPT---------ESPPQ 51

Query: 219 KPNKEDSRSNNNWKLNESEKAPAAAVYKNWQHPAAPFCYNES-SAMRPF 76
           KP     R    W   E+EK P   V+K WQHPAAPF Y  + S+ +PF
Sbjct: 52  KPPAVMKREEQRWG-KEAEKPP---VFKKWQHPAAPFYYQPAPSSNQPF 96


>ref|XP_002892209.1| hypothetical protein ARALYDRAFT_887595 [Arabidopsis lyrata subsp.
           lyrata] gi|297338051|gb|EFH68468.1| hypothetical protein
           ARALYDRAFT_887595 [Arabidopsis lyrata subsp. lyrata]
          Length = 100

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = -3

Query: 393 MSDTAANISGN-RRLSSRLQKRAPASIKITPAK-DWNVAIXXXXXXXXXXXXXPIRTAEL 220
           MS TA N+SG+  R SSRLQ+RAP  +KI P++ +W VAI                +   
Sbjct: 1   MSSTARNVSGSGNRKSSRLQRRAPPPLKINPSEANWKVAIPFLSPT---------ESPPQ 51

Query: 219 KPNKEDSRSNNNWKLNESEKAPAAAVYKNWQHPAAPFCYNES-SAMRPF 76
           KP     R    W   E+EK P   V+K WQHPAAPF Y  + S+ +PF
Sbjct: 52  KPPAVMKREEQRWG-KEAEKPP---VFKKWQHPAAPFYYQPAPSSNQPF 96


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