BLASTX nr result

ID: Bupleurum21_contig00022150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022150
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167340.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   163   1e-60
ref|XP_003632932.1| PREDICTED: 60S ribosomal protein L7-4-like [...   164   2e-60
ref|XP_004134063.1| PREDICTED: 60S ribosomal protein L7-4-like [...   163   2e-60
ref|XP_002517516.1| 60S ribosomal protein L7, putative [Ricinus ...   163   2e-60
ref|NP_187967.1| 60S ribosomal protein L7-4 [Arabidopsis thalian...   160   4e-60

>ref|XP_004167340.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L7-4-like
           [Cucumis sativus]
          Length = 246

 Score =  163 bits (413), Expect(2) = 1e-60
 Identities = 78/97 (80%), Positives = 91/97 (93%)
 Frame = -3

Query: 517 GPVIPESFLKKQKRSEEWALAKKQEVEAIKKKNKENRKLIFNRAKMYSKEYEEQQKELIR 338
           GPV+PES LKKQKR+EEWALA+K+ +E  KKKN ENRKLI+ RAK+Y+KEY+EQQKELI+
Sbjct: 9   GPVVPESVLKKQKRNEEWALAEKKXLEVAKKKNAENRKLIYTRAKLYAKEYDEQQKELIQ 68

Query: 337 LKREARLKGGFYVNPEAKLLFIIRIRGINAIDPKTKK 227
           LKREA+LKGGFYV+PEAKLLFIIRIRGINAIDPKT+K
Sbjct: 69  LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTRK 105



 Score = 95.1 bits (235), Expect(2) = 1e-60
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = -2

Query: 146 LRLRQIFNGVFLKVNKATLNMLRRVEPYVTYGYPNLKSVKELIYKRG 6
           LRLRQIFNGVFLKVNKATLNML RVEPYVTYGYPNLKSVKELIYKRG
Sbjct: 110 LRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG 156


>ref|XP_003632932.1| PREDICTED: 60S ribosomal protein L7-4-like [Vitis vinifera]
           gi|297735811|emb|CBI18498.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  164 bits (415), Expect(2) = 2e-60
 Identities = 80/97 (82%), Positives = 91/97 (93%)
 Frame = -3

Query: 517 GPVIPESFLKKQKRSEEWALAKKQEVEAIKKKNKENRKLIFNRAKMYSKEYEEQQKELIR 338
           GPVIPES LKKQKR+EEW LAKKQEVEA KKKN +NRKLI++RAK Y+KEYEEQQKELI+
Sbjct: 9   GPVIPESVLKKQKRNEEWTLAKKQEVEAKKKKNADNRKLIYSRAKQYAKEYEEQQKELIQ 68

Query: 337 LKREARLKGGFYVNPEAKLLFIIRIRGINAIDPKTKK 227
           LKREA+LKGGFYV+PEAKLLF+IRIRGINA+ PKT+K
Sbjct: 69  LKREAKLKGGFYVDPEAKLLFMIRIRGINAMHPKTRK 105



 Score = 94.0 bits (232), Expect(2) = 2e-60
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = -2

Query: 146 LRLRQIFNGVFLKVNKATLNMLRRVEPYVTYGYPNLKSVKELIYKRGH 3
           LRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRG+
Sbjct: 110 LRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGY 157


>ref|XP_004134063.1| PREDICTED: 60S ribosomal protein L7-4-like [Cucumis sativus]
          Length = 246

 Score =  163 bits (412), Expect(2) = 2e-60
 Identities = 78/97 (80%), Positives = 91/97 (93%)
 Frame = -3

Query: 517 GPVIPESFLKKQKRSEEWALAKKQEVEAIKKKNKENRKLIFNRAKMYSKEYEEQQKELIR 338
           GPV+PES LKKQKR+EEWALA+K+ +E  KKKN ENRKLI+ RAK+Y+KEY+EQQKELI+
Sbjct: 9   GPVVPESVLKKQKRNEEWALAEKKGLEVAKKKNAENRKLIYTRAKLYAKEYDEQQKELIQ 68

Query: 337 LKREARLKGGFYVNPEAKLLFIIRIRGINAIDPKTKK 227
           LKREA+LKGGFYV+PEAKLLFIIRIRGINAIDPKT+K
Sbjct: 69  LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTRK 105



 Score = 95.1 bits (235), Expect(2) = 2e-60
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = -2

Query: 146 LRLRQIFNGVFLKVNKATLNMLRRVEPYVTYGYPNLKSVKELIYKRG 6
           LRLRQIFNGVFLKVNKATLNML RVEPYVTYGYPNLKSVKELIYKRG
Sbjct: 110 LRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG 156


>ref|XP_002517516.1| 60S ribosomal protein L7, putative [Ricinus communis]
           gi|223543527|gb|EEF45058.1| 60S ribosomal protein L7,
           putative [Ricinus communis]
          Length = 243

 Score =  163 bits (413), Expect(2) = 2e-60
 Identities = 80/98 (81%), Positives = 92/98 (93%)
 Frame = -3

Query: 520 EGPVIPESFLKKQKRSEEWALAKKQEVEAIKKKNKENRKLIFNRAKMYSKEYEEQQKELI 341
           E  ++PES LKK KR+EEWALAKKQE+EA KKK KE+RKLIFNRAK+Y+KEY++QQKELI
Sbjct: 5   EVKMVPESVLKKTKRNEEWALAKKQELEASKKKAKESRKLIFNRAKLYAKEYDQQQKELI 64

Query: 340 RLKREARLKGGFYVNPEAKLLFIIRIRGINAIDPKTKK 227
           +LKREA+LKGGFYVNPEAKLLFIIRIRGINAIDPKT+K
Sbjct: 65  QLKREAKLKGGFYVNPEAKLLFIIRIRGINAIDPKTRK 102



 Score = 94.7 bits (234), Expect(2) = 2e-60
 Identities = 45/48 (93%), Positives = 47/48 (97%)
 Frame = -2

Query: 146 LRLRQIFNGVFLKVNKATLNMLRRVEPYVTYGYPNLKSVKELIYKRGH 3
           LRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRG+
Sbjct: 107 LRLRQIFNGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVKELIYKRGY 154


>ref|NP_187967.1| 60S ribosomal protein L7-4 [Arabidopsis thaliana]
           gi|42572417|ref|NP_974304.1| 60S ribosomal protein L7-4
           [Arabidopsis thaliana] gi|42572419|ref|NP_974305.1| 60S
           ribosomal protein L7-4 [Arabidopsis thaliana]
           gi|38503370|sp|Q9LHP1.1|RL74_ARATH RecName: Full=60S
           ribosomal protein L7-4 gi|11994560|dbj|BAB02600.1| 60S
           ribosomal protein L7 [Arabidopsis thaliana]
           gi|14532552|gb|AAK64004.1| AT3g13580/K20M4_2
           [Arabidopsis thaliana] gi|15810196|gb|AAL06999.1|
           AT3g13580/K20M4_2 [Arabidopsis thaliana]
           gi|18655395|gb|AAL76153.1| AT3g13580/K20M4_2
           [Arabidopsis thaliana] gi|332641855|gb|AEE75376.1| 60S
           ribosomal protein L7-4 [Arabidopsis thaliana]
           gi|332641856|gb|AEE75377.1| 60S ribosomal protein L7-4
           [Arabidopsis thaliana] gi|332641857|gb|AEE75378.1| 60S
           ribosomal protein L7-4 [Arabidopsis thaliana]
          Length = 244

 Score =  160 bits (406), Expect(2) = 4e-60
 Identities = 78/95 (82%), Positives = 89/95 (93%)
 Frame = -3

Query: 511 VIPESFLKKQKRSEEWALAKKQEVEAIKKKNKENRKLIFNRAKMYSKEYEEQQKELIRLK 332
           V+PES LKK+KR EEWALAKKQE+EA KK+N E RKLIFNRAK YSKEY+E+++ELI+LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 331 REARLKGGFYVNPEAKLLFIIRIRGINAIDPKTKK 227
           REA+LKGGFYV+PEAKLLFIIRIRGINAIDPKTKK
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK 103



 Score = 96.3 bits (238), Expect(2) = 4e-60
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = -2

Query: 146 LRLRQIFNGVFLKVNKATLNMLRRVEPYVTYGYPNLKSVKELIYKRG 6
           LRLRQIFNGVFLKVNKAT+NMLRRVEPYVTYGYPNLKSVKELIYKRG
Sbjct: 108 LRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRG 154


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