BLASTX nr result

ID: Bupleurum21_contig00022105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022105
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 3...   411   e-112
ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 3...   389   e-105
ref|XP_002511457.1| ubiquitin-protein ligase, putative [Ricinus ...   389   e-105
ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3...   387   e-105

>ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|222868559|gb|EEF05690.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score =  418 bits (1075), Expect = e-114
 Identities = 230/376 (61%), Positives = 280/376 (74%), Gaps = 10/376 (2%)
 Frame = +2

Query: 41   QNKPPPEFLCPITRSLMFDPVVVSSGQTFERTSVQVCRDLAFTPPLSDGSVPDFSVLIPN 220
            Q +PP EF+CPI+ SLMFDPVVVSSGQTFER SVQVC DL F P L D S+PDF+ +IPN
Sbjct: 26   QQQPPKEFICPISGSLMFDPVVVSSGQTFERLSVQVCHDLGFIPTLQDNSLPDFTNVIPN 85

Query: 221  LALKSTILSWCDASGVPHPSVPDYFSIQSTVRCEMDNSSSNIRGSERDLLRGVPDKPPVL 400
            LA+K+TI +WCD+SG  HP  PDY S++  +R +M   S +IR SER+LL+ V + PPVL
Sbjct: 86   LAIKTTIQNWCDSSGTQHPPAPDYSSLEEIIREKM-KFSPDIRVSERELLKAVAENPPVL 144

Query: 401  FSHAATELNPRLNNHFYXXXXXDESVVANVPATPL------LPFATRPXXXXXXXXXXXX 562
            FSHA TEL  R+N HFY     +ESV+ N  ATP       LP ATRP            
Sbjct: 145  FSHANTELPHRVN-HFYSSSS-EESVIVNTAATPSASPLTPLPLATRPACYSSTSSSSN- 201

Query: 563  XEFATDESL----NPKFSSEEEELIMVKLMSSDVFDQEQGLKNLRKLTRTNEEARVSLCT 730
               A  E+L    NPK S EE+E++  KL S DV DQEQGL +LRK+TRT EE RVSLCT
Sbjct: 202  -SIAESETLTVTENPKLSREEDEIVE-KLKSLDVRDQEQGLISLRKITRTKEETRVSLCT 259

Query: 731  PPMLTAVRLALFSKYVDVQTNAAAAIVNLSLAKVNKVKIVRSGIVPPLIDLLKGGYIESQ 910
            P +L+A+R    S+Y  VQTNA A++VNLSL KVNKVKIVRSG +P LID+LKGG+ E+Q
Sbjct: 260  PRLLSALRTLFPSRYFSVQTNAIASLVNLSLEKVNKVKIVRSGFIPLLIDVLKGGFDEAQ 319

Query: 911  EHAAGALFSLAVEDDNRTAIGVLGALQPLVHALRSESERTRHDSASALYNLSLIQSNRVK 1090
            EHAAGALFSLA+ED+N+ AIGVLGALQPL+H LR+ESER RHDS+ ALY+LSLIQSNRVK
Sbjct: 320  EHAAGALFSLALEDENKMAIGVLGALQPLMHMLRAESERARHDSSLALYHLSLIQSNRVK 379

Query: 1091 LIKLGAVTTLLSLLEN 1138
            L+KLGAV+ LLS++++
Sbjct: 380  LVKLGAVSMLLSMVKS 395


>ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 38-like [Vitis vinifera]
          Length = 523

 Score =  411 bits (1056), Expect = e-112
 Identities = 229/368 (62%), Positives = 280/368 (76%), Gaps = 6/368 (1%)
 Frame = +2

Query: 53   PPEFLCPITRSLMFDPVVVSSGQTFERTSVQVCRDLAFTPPLSDGSVPDFSVLIPNLALK 232
            P EF+CPI+ SLM DPVVV+SGQTFER SVQVCR+LAF P L DGS PDF+V+IPNLA+K
Sbjct: 24   PKEFMCPISGSLMADPVVVASGQTFERISVQVCRNLAFVPVLGDGSRPDFTVVIPNLAMK 83

Query: 233  STILSWCDASGVPHPSVPDYFSIQSTVRCEMDNSSSN-IRGSERDLLRGVPDKPPVLFSH 409
            S IL+WC AS V  P+ P+Y S+++ VR  M +   +    SE++LLR VP  PPV+FSH
Sbjct: 84   SAILNWCAASRVDRPTEPEYGSVETLVRAAMGSDGDDRFETSEKELLRAVPGNPPVMFSH 143

Query: 410  AATELNPRLNNHFYXXXXXDESVVANVPATPLLPFATRPXXXXXXXXXXXXXEFATDESL 589
            AATE+N R  NHFY     +ESV+A VPATPL P  TRP               ++DE+L
Sbjct: 144  AATEVNHR-PNHFYSSSS-EESVIAAVPATPL-PLTTRPSCYSSFSS-------SSDEAL 193

Query: 590  N-----PKFSSEEEELIMVKLMSSDVFDQEQGLKNLRKLTRTNEEARVSLCTPPMLTAVR 754
            +        SSEEEE I+ KL SS+V +QE+GL  LR +TRT E+ RVSLCTP +L+A+R
Sbjct: 194  SLAVTLDPISSEEEE-ILGKLKSSEVHEQEEGLILLRTITRTKEDLRVSLCTPGVLSALR 252

Query: 755  LALFSKYVDVQTNAAAAIVNLSLAKVNKVKIVRSGIVPPLIDLLKGGYIESQEHAAGALF 934
            L L S+Y  VQTNA A++VNLSL K NK KIVRSGIVPPLIDLLKGG  ESQEHAAGALF
Sbjct: 253  LLLNSRYGVVQTNAVASVVNLSLEKPNKAKIVRSGIVPPLIDLLKGGLPESQEHAAGALF 312

Query: 935  SLAVEDDNRTAIGVLGALQPLVHALRSESERTRHDSASALYNLSLIQSNRVKLIKLGAVT 1114
            SLA+ED+N+TAIGV+GAL PL+H+LRSESERTRHDSA ALY+LSL QSNRVKL+KLGA+ 
Sbjct: 313  SLAIEDNNKTAIGVMGALPPLLHSLRSESERTRHDSALALYHLSLDQSNRVKLVKLGAIP 372

Query: 1115 TLLSLLEN 1138
            TLL+++++
Sbjct: 373  TLLAMVKS 380


>ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 518

 Score =  389 bits (998), Expect = e-105
 Identities = 214/362 (59%), Positives = 263/362 (72%), Gaps = 1/362 (0%)
 Frame = +2

Query: 50   PPPEFLCPITRSLMFDPVVVSSGQTFERTSVQVCRDLAFTPPLSDGSVPDFSVLIPNLAL 229
            PP EF CPI+ SLM DPVVV+SGQTFER +VQ+C+DL F+P L DG+ PDFS LIPNLA+
Sbjct: 20   PPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCKDLNFSPKLDDGTRPDFSTLIPNLAI 79

Query: 230  KSTILSWCDASGVPHPSVPDYFSIQSTVRCEMDNSSSNIRGSERDLLRGVPDKPPVLFSH 409
            K+TIL WCD +   HP  PDY S+Q  V  + +N    +R SE +LL  V D PPV+FSH
Sbjct: 80   KTTILHWCDNARTQHPRPPDYASLQRLVLEQKEND--RVRVSEMELLNAVADLPPVIFSH 137

Query: 410  AATELNPRLNNHFYXXXXXDESVVA-NVPATPLLPFATRPXXXXXXXXXXXXXEFATDES 586
            AATEL PR+N+         ESV+  + P TPL P   RP             E   + S
Sbjct: 138  AATELGPRVNHFNSGSSSEQESVIIPSSPGTPL-PLTIRPTCFSSSSSSSCEIEI--ENS 194

Query: 587  LNPKFSSEEEELIMVKLMSSDVFDQEQGLKNLRKLTRTNEEARVSLCTPPMLTAVRLALF 766
              P  +SEEEE ++ KL S++VF+QE+G+  LRK+TR  E+ARVSLCTP +L A+R  + 
Sbjct: 195  NTP--ASEEEEGLLKKLKSNEVFEQEEGVIALRKITRNKEDARVSLCTPRVLLALRGLIA 252

Query: 767  SKYVDVQTNAAAAIVNLSLAKVNKVKIVRSGIVPPLIDLLKGGYIESQEHAAGALFSLAV 946
            S+Y  VQ NA A++VNLSL K NKVKIVRSG VP LID+LKGG  ESQEHAAGALFSLA+
Sbjct: 253  SRYGVVQVNAVASLVNLSLEKQNKVKIVRSGFVPFLIDVLKGGLGESQEHAAGALFSLAL 312

Query: 947  EDDNRTAIGVLGALQPLVHALRSESERTRHDSASALYNLSLIQSNRVKLIKLGAVTTLLS 1126
            +DDN+ AIGVLGAL PL+HALR+ESERTRHDSA ALY+LSL+QSNR+KL+KLG V TLLS
Sbjct: 313  DDDNKMAIGVLGALHPLMHALRAESERTRHDSALALYHLSLVQSNRMKLVKLGVVPTLLS 372

Query: 1127 LL 1132
            ++
Sbjct: 373  MV 374


>ref|XP_002511457.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223550572|gb|EEF52059.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 518

 Score =  389 bits (998), Expect = e-105
 Identities = 217/369 (58%), Positives = 263/369 (71%), Gaps = 10/369 (2%)
 Frame = +2

Query: 62   FLCPITRSLMFDPVVVSSGQTFERTSVQVCRDLAFTPPLSDGSVPDFSVLIPNLALKSTI 241
            FLCPI+ SLM DPVVVSSGQT ER SVQVCRDL F P L D SV DFS +IPNLA+K+TI
Sbjct: 13   FLCPISGSLMSDPVVVSSGQTLERVSVQVCRDLCFVPILEDDSVLDFSTVIPNLAIKTTI 72

Query: 242  LSWCDASGVPHPSVPDYFSIQSTV----RCEMDNSSSNIRGSERDLLRGVPDKPPVLFSH 409
              WCD SG   P  PDY  +Q  +         +S+ +IR SER+LL+GV + PPVLFSH
Sbjct: 73   HKWCDTSGAERPRAPDYTCVQKIILKMIESRKSSSTPDIRVSERELLKGVAENPPVLFSH 132

Query: 410  AATELNPRLNNHFYXXXXXDESVVANVPATPL---LPFATRPXXXXXXXXXXXXXEFATD 580
            AATELN R N HFY     +  +V++ PA+PL   LP ATRP                  
Sbjct: 133  AATELNHRAN-HFYTSSSDESVIVSHAPASPLTPPLPLATRPACYTCSSSNSSSEITEPA 191

Query: 581  ESLNPKFSS---EEEELIMVKLMSSDVFDQEQGLKNLRKLTRTNEEARVSLCTPPMLTAV 751
            E+L  + S+    EEE I+VKL S +V  QE+G+  LRK+TR  EE RV+L T  +L+A+
Sbjct: 192  ETLTLEHSNCSIPEEEEIVVKLSSLEVHQQEEGVIQLRKITRAKEELRVALATSRLLSAL 251

Query: 752  RLALFSKYVDVQTNAAAAIVNLSLAKVNKVKIVRSGIVPPLIDLLKGGYIESQEHAAGAL 931
            R  + S+Y  VQTN+ A++VNLSL K NKVKIVRSG VP LID+LK G  E QEHAAGAL
Sbjct: 252  RSLIASRYSVVQTNSIASLVNLSLEKSNKVKIVRSGFVPLLIDVLKAGSSEPQEHAAGAL 311

Query: 932  FSLAVEDDNRTAIGVLGALQPLVHALRSESERTRHDSASALYNLSLIQSNRVKLIKLGAV 1111
            FSLA++D+N+ AIGVLGALQPL+HALRSESERTRHDSA ALY+L+LIQSNRVKL+KLGAV
Sbjct: 312  FSLALQDENKMAIGVLGALQPLMHALRSESERTRHDSALALYHLTLIQSNRVKLVKLGAV 371

Query: 1112 TTLLSLLEN 1138
             TLLS+L++
Sbjct: 372  ATLLSMLKS 380


>ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 525

 Score =  387 bits (995), Expect = e-105
 Identities = 218/364 (59%), Positives = 264/364 (72%), Gaps = 1/364 (0%)
 Frame = +2

Query: 44   NKPPPEFLCPITRSLMFDPVVVSSGQTFERTSVQVCRDLAFTPPLSDGSVPDFSVLIPNL 223
            N+ P EF CPI+ SLM DPVVV+SGQTFER +VQ+C+DL F+P L DG+ PDFS +IPNL
Sbjct: 26   NQVPKEFTCPISGSLMSDPVVVASGQTFERLAVQLCKDLNFSPKLDDGTRPDFSTIIPNL 85

Query: 224  ALKSTILSWCDASGVPHPSVPDYFSIQSTVRCEMDNSSSNIRGSERDLLRGVPDKPPVLF 403
            A+K+TIL WCD S    P  PDY S++  VR E +     IR SE++LL  V D PPV+F
Sbjct: 86   AIKTTILHWCDNSRTQPPLPPDYASLERHVREEKEKQDL-IRVSEKELLNAVADNPPVIF 144

Query: 404  SHAATELNPRLNNHFYXXXXXDESVVANV-PATPLLPFATRPXXXXXXXXXXXXXEFATD 580
            SHAATEL PR+N HF      +ESV+    P TPL P   RP             E   +
Sbjct: 145  SHAATELGPRVN-HFNSGSSSEESVIIPPSPGTPL-PLTIRPTCFSSSSSSC---EIEIE 199

Query: 581  ESLNPKFSSEEEELIMVKLMSSDVFDQEQGLKNLRKLTRTNEEARVSLCTPPMLTAVRLA 760
                P  +SEEEE I+ KL S++VF+QE+G   LRK+TR  EEARVSLCTP +L A+R  
Sbjct: 200  NPNTP--ASEEEEGILKKLKSNEVFEQEEGAIALRKITRCKEEARVSLCTPRVLLALRGL 257

Query: 761  LFSKYVDVQTNAAAAIVNLSLAKVNKVKIVRSGIVPPLIDLLKGGYIESQEHAAGALFSL 940
            L S+Y  VQ NA A++VNLSL K NK+KIVRSG VP LID+LKGG  ESQEHAAGALFSL
Sbjct: 258  LASRYGVVQVNAVASLVNLSLEKQNKLKIVRSGFVPFLIDVLKGGLGESQEHAAGALFSL 317

Query: 941  AVEDDNRTAIGVLGALQPLVHALRSESERTRHDSASALYNLSLIQSNRVKLIKLGAVTTL 1120
            A++DDN+ AIGVLGAL PL+HALR+ESERTRHDSA ALY+LSL+QSNR+KL+KLGAV TL
Sbjct: 318  ALDDDNKMAIGVLGALHPLMHALRAESERTRHDSALALYHLSLVQSNRLKLVKLGAVPTL 377

Query: 1121 LSLL 1132
            LS++
Sbjct: 378  LSMV 381


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