BLASTX nr result

ID: Bupleurum21_contig00022051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022051
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subu...   213   3e-53
ref|XP_003550151.1| PREDICTED: replication protein A 32 kDa subu...   199   2e-49
ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V...   194   8e-48
gb|ACU17707.1| unknown [Glycine max]                                  188   7e-46
ref|XP_003544637.1| PREDICTED: replication factor A protein 2-li...   187   1e-45

>ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
           sativus] gi|449519474|ref|XP_004166760.1| PREDICTED:
           replication protein A 32 kDa subunit A-like [Cucumis
           sativus]
          Length = 271

 Score =  213 bits (541), Expect = 3e-53
 Identities = 112/205 (54%), Positives = 138/205 (67%), Gaps = 3/205 (1%)
 Frame = -2

Query: 606 EASHSGDDKFNFLXXXXXXXXXXXXXXVTGKAERVTDIGFTIDDGTGRINCTRWINEEYD 427
           EASHSG++K NF+              V+ KAER TDI FT+DDGTG I C RW+N+ +D
Sbjct: 42  EASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFD 101

Query: 426 TKEMSEIQEGMYVRVIGRLKSFLGRKQILAFSVRPVTNFDEITCHFIECIHFHLKNSSLQ 247
           T +M EIQ+GMYVRV G LK F   KQI AFSVRPVTNFDEIT HFIECIH HL+NS LQ
Sbjct: 102 TNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ 161

Query: 246 --KGDVFTQ-STSNQALSTPSQQGTNAYQAPASNSPSGLLNVDGLKGFEQLVLGYRQRPS 76
             KG+  TQ  TS+  + TP Q G+N Y   +S  PS    VD  K  ++LVL Y Q PS
Sbjct: 162 NLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPS 221

Query: 75  SFKNEKGVHKDVLHKELKIPVEKLM 1
           S   E+G+HKD L ++LK+P+EK++
Sbjct: 222 SVAKERGIHKDELSQQLKLPMEKIL 246


>ref|XP_003550151.1| PREDICTED: replication protein A 32 kDa subunit-like [Glycine max]
          Length = 277

 Score =  199 bits (507), Expect = 2e-49
 Identities = 97/201 (48%), Positives = 130/201 (64%)
 Frame = -2

Query: 606 EASHSGDDKFNFLXXXXXXXXXXXXXXVTGKAERVTDIGFTIDDGTGRINCTRWINEEYD 427
           EAS SGD+K NF+              V  K ER TD+ F +DDGTGRI C RW+NE +D
Sbjct: 52  EASQSGDEKSNFVINGVDLNNVTLLGMVFEKVERNTDVNFVLDDGTGRIKCRRWVNEAFD 111

Query: 426 TKEMSEIQEGMYVRVIGRLKSFLGRKQILAFSVRPVTNFDEITCHFIECIHFHLKNSSLQ 247
           TKEM  +  GMYVRV G LKSF G KQ++ FS RPVTNFDEI  HFI+CIH HL++    
Sbjct: 112 TKEMEAVMNGMYVRVYGHLKSFQGVKQLVTFSARPVTNFDEIPFHFIDCIHNHLRSKIKM 171

Query: 246 KGDVFTQSTSNQALSTPSQQGTNAYQAPASNSPSGLLNVDGLKGFEQLVLGYRQRPSSFK 67
           +G   +  +S  +L+TP +   N  QAP+SN  S   +VDGLKG ++L++ Y ++ S   
Sbjct: 172 EGITSSNPSSGSSLNTPGKSAPNGSQAPSSNPVSAQHSVDGLKGIDKLIMDYLEQHSDMS 231

Query: 66  NEKGVHKDVLHKELKIPVEKL 4
           + +G+H D L +ELK+P+EK+
Sbjct: 232 DGRGIHVDELSRELKLPMEKI 252


>ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
           gi|296081770|emb|CBI20775.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  194 bits (494), Expect = 8e-48
 Identities = 100/202 (49%), Positives = 130/202 (64%)
 Frame = -2

Query: 606 EASHSGDDKFNFLXXXXXXXXXXXXXXVTGKAERVTDIGFTIDDGTGRINCTRWINEEYD 427
           EASHSGDDK NF               V  K+ERVTD+ F +DDGTGRI C RW+NE +D
Sbjct: 46  EASHSGDDKSNFQIDGVDVTNITLVGMVFDKSERVTDVSFALDDGTGRIECKRWVNEAFD 105

Query: 426 TKEMSEIQEGMYVRVIGRLKSFLGRKQILAFSVRPVTNFDEITCHFIECIHFHLKNSSLQ 247
           T+EM  I +G+YVR+ G L+S  G +Q++AFSVRPVTNFDEI  HFIE IH HLKNS  +
Sbjct: 106 TREMENISDGIYVRLNGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTR 165

Query: 246 KGDVFTQSTSNQALSTPSQQGTNAYQAPASNSPSGLLNVDGLKGFEQLVLGYRQRPSSFK 67
                      Q LS   +  +  YQ P+S   +   +VDG+KG +Q+VL Y Q+PS++ 
Sbjct: 166 ----LPSDALTQPLSASVKTESTGYQTPSSQLSA--QSVDGVKGLDQMVLDYLQQPSNYD 219

Query: 66  NEKGVHKDVLHKELKIPVEKLM 1
            EKG+H+D L ++LKI  EK+M
Sbjct: 220 REKGIHRDELSQQLKISTEKIM 241


>gb|ACU17707.1| unknown [Glycine max]
          Length = 292

 Score =  188 bits (477), Expect = 7e-46
 Identities = 97/201 (48%), Positives = 126/201 (62%)
 Frame = -2

Query: 606 EASHSGDDKFNFLXXXXXXXXXXXXXXVTGKAERVTDIGFTIDDGTGRINCTRWINEEYD 427
           EAS SGD+K NF+              +  K ER TD+ F +DDGTGRI C RWINE +D
Sbjct: 69  EASQSGDEKSNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEAFD 128

Query: 426 TKEMSEIQEGMYVRVIGRLKSFLGRKQILAFSVRPVTNFDEITCHFIECIHFHLKNSSLQ 247
           TKEM  +   MYVRV G LKSF G KQ++AFSVRPVTNFDEI  HFI+CIH HL++    
Sbjct: 129 TKEMEAVMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKV 188

Query: 246 KGDVFTQSTSNQALSTPSQQGTNAYQAPASNSPSGLLNVDGLKGFEQLVLGYRQRPSSFK 67
           +G      +S  +L TP +   N  Q  ASN      +VDGLKG ++LV+ Y ++ S   
Sbjct: 189 EGITSANPSSGSSLETPVKSAPNRSQ--ASNPVCAQRSVDGLKGIDKLVMDYLEQHSDRS 246

Query: 66  NEKGVHKDVLHKELKIPVEKL 4
           + +G+H D L +ELK+P+EK+
Sbjct: 247 DGRGIHVDELSRELKLPIEKI 267


>ref|XP_003544637.1| PREDICTED: replication factor A protein 2-like [Glycine max]
          Length = 292

 Score =  187 bits (476), Expect = 1e-45
 Identities = 97/201 (48%), Positives = 126/201 (62%)
 Frame = -2

Query: 606 EASHSGDDKFNFLXXXXXXXXXXXXXXVTGKAERVTDIGFTIDDGTGRINCTRWINEEYD 427
           EAS SGD+K NF+              +  K ER TD+ F +DDGTGRI C RWINE +D
Sbjct: 69  EASQSGDEKSNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEAFD 128

Query: 426 TKEMSEIQEGMYVRVIGRLKSFLGRKQILAFSVRPVTNFDEITCHFIECIHFHLKNSSLQ 247
           TKEM  +   MYVRV G LKSF G KQ++AFSVRPVTNFDEI  HFI+CIH HL++    
Sbjct: 129 TKEMEAVMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKV 188

Query: 246 KGDVFTQSTSNQALSTPSQQGTNAYQAPASNSPSGLLNVDGLKGFEQLVLGYRQRPSSFK 67
           +G      +S  +L TP +   N  Q  ASN      +VDGLKG ++LV+ Y ++ S   
Sbjct: 189 EGITSANPSSGSSLETPVKSAPNRSQ--ASNPVCAQHSVDGLKGIDKLVMDYLEQHSDRS 246

Query: 66  NEKGVHKDVLHKELKIPVEKL 4
           + +G+H D L +ELK+P+EK+
Sbjct: 247 DGRGIHVDELSRELKLPIEKI 267


Top