BLASTX nr result

ID: Bupleurum21_contig00021494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021494
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560681.1| PREDICTED: eukaryotic peptide chain release ...   315   3e-84
ref|NP_001151538.1| eukaryotic peptide chain release factor subu...   315   3e-84
gb|ADP02190.1| putative eukaryotic peptide chain release factor ...   315   4e-84
ref|XP_002466604.1| hypothetical protein SORBIDRAFT_01g010860 [S...   314   7e-84
ref|XP_002321067.1| predicted protein [Populus trichocarpa] gi|2...   314   9e-84

>ref|XP_003560681.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Brachypodium distachyon]
           gi|357117871|ref|XP_003560685.1| PREDICTED: eukaryotic
           peptide chain release factor subunit 1-3-like
           [Brachypodium distachyon]
          Length = 437

 Score =  315 bits (808), Expect = 3e-84
 Identities = 155/203 (76%), Positives = 178/203 (87%)
 Frame = -1

Query: 614 GTSMISLLLPPRTQLSDVTRRLMHEHGTAKNIKSRVNRQSVLSAITYAQQRLKLYTKVPP 435
           GTSMISL++PPR Q+S VT+ L  E+GTA NIKSRVNRQSVL+AIT AQQRLKLY +VPP
Sbjct: 30  GTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKSRVNRQSVLAAITSAQQRLKLYNRVPP 89

Query: 434 NGLVL*VGIVLNDNGKEERVTIDFEPFKPINTSVYLCDNKFHTEALYQLLESDDKFGFIV 255
           NGLVL  G ++ D+GKE++VTIDFEPFKPIN S+YLCDNKFHTEAL +LLESDDKFGFI+
Sbjct: 90  NGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFII 149

Query: 254 MDGNGTLFGTLCGNSRKVVHKFNVSLPNKQRRGGQSAPRFGRIRVEKRHNYVMNIAELAT 75
           MDGNGTLFGTL GN+R+V+HKF+V LP K  RGGQSA RF R+R+EKRHNYV   AELAT
Sbjct: 150 MDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELAT 209

Query: 74  QFFISPVTNQPNVAGLILAGSAD 6
           QFFI+P T+QPNVAGLILAGSAD
Sbjct: 210 QFFINPATSQPNVAGLILAGSAD 232


>ref|NP_001151538.1| eukaryotic peptide chain release factor subunit 1-1 [Zea mays]
           gi|195647508|gb|ACG43222.1| eukaryotic peptide chain
           release factor subunit 1-1 [Zea mays]
           gi|224035083|gb|ACN36617.1| unknown [Zea mays]
           gi|413933342|gb|AFW67893.1| eukaryotic peptide chain
           release factor subunit 1-1 isoform 1 [Zea mays]
           gi|413933343|gb|AFW67894.1| eukaryotic peptide chain
           release factor subunit 1-1 isoform 2 [Zea mays]
          Length = 437

 Score =  315 bits (808), Expect = 3e-84
 Identities = 156/203 (76%), Positives = 177/203 (87%)
 Frame = -1

Query: 614 GTSMISLLLPPRTQLSDVTRRLMHEHGTAKNIKSRVNRQSVLSAITYAQQRLKLYTKVPP 435
           GTSMISL++PPR Q+S VT+ L  E+GTA NIKSRVNRQSVL+AIT AQQRLKLY KVPP
Sbjct: 30  GTSMISLIMPPRDQISRVTKMLGDEYGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPP 89

Query: 434 NGLVL*VGIVLNDNGKEERVTIDFEPFKPINTSVYLCDNKFHTEALYQLLESDDKFGFIV 255
           NGLVL  G ++ ++GKE++VTIDFEPFKPIN S+YLCDNKFHTEAL +LLESDDKFGFIV
Sbjct: 90  NGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIV 149

Query: 254 MDGNGTLFGTLCGNSRKVVHKFNVSLPNKQRRGGQSAPRFGRIRVEKRHNYVMNIAELAT 75
           MDGNGTLFGTL GN+R+V+HKF V LP K  RGGQSA RF R+R+EKRHNYV   AELAT
Sbjct: 150 MDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELAT 209

Query: 74  QFFISPVTNQPNVAGLILAGSAD 6
           QFFI+P T+QPNVAGLILAGSAD
Sbjct: 210 QFFINPATSQPNVAGLILAGSAD 232


>gb|ADP02190.1| putative eukaryotic peptide chain release factor subunit 1-3
           [Triticum aestivum]
          Length = 437

 Score =  315 bits (807), Expect = 4e-84
 Identities = 155/203 (76%), Positives = 177/203 (87%)
 Frame = -1

Query: 614 GTSMISLLLPPRTQLSDVTRRLMHEHGTAKNIKSRVNRQSVLSAITYAQQRLKLYTKVPP 435
           GTSMISL++PPR Q+S VT+ L  E+GTA NIKSRVNRQSVL AIT AQQRLKLY +VPP
Sbjct: 30  GTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPP 89

Query: 434 NGLVL*VGIVLNDNGKEERVTIDFEPFKPINTSVYLCDNKFHTEALYQLLESDDKFGFIV 255
           NGLVL  G ++ D+GKE++VTIDFEPFKPIN S+YLCDNKFHTEAL +LLESDDKFGFI+
Sbjct: 90  NGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALSELLESDDKFGFII 149

Query: 254 MDGNGTLFGTLCGNSRKVVHKFNVSLPNKQRRGGQSAPRFGRIRVEKRHNYVMNIAELAT 75
           MDGNGTLFGTL GN+R+V+HKF+V LP K  RGGQSA RF R+R+EKRHNYV   AELAT
Sbjct: 150 MDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELAT 209

Query: 74  QFFISPVTNQPNVAGLILAGSAD 6
           QFFI+P T+QPNVAGLILAGSAD
Sbjct: 210 QFFINPATSQPNVAGLILAGSAD 232


>ref|XP_002466604.1| hypothetical protein SORBIDRAFT_01g010860 [Sorghum bicolor]
           gi|241920458|gb|EER93602.1| hypothetical protein
           SORBIDRAFT_01g010860 [Sorghum bicolor]
          Length = 437

 Score =  314 bits (805), Expect = 7e-84
 Identities = 155/203 (76%), Positives = 177/203 (87%)
 Frame = -1

Query: 614 GTSMISLLLPPRTQLSDVTRRLMHEHGTAKNIKSRVNRQSVLSAITYAQQRLKLYTKVPP 435
           GTSMISL++PPR Q+S VT+ L  E+GTA NIKSRVNRQSVL+AIT AQQRLKLY KVPP
Sbjct: 30  GTSMISLIMPPRDQISRVTKMLGDEYGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPP 89

Query: 434 NGLVL*VGIVLNDNGKEERVTIDFEPFKPINTSVYLCDNKFHTEALYQLLESDDKFGFIV 255
           NGLVL  G ++ ++GKE++VTIDFEPF+PIN S+YLCDNKFHTEAL +LLESDDKFGFIV
Sbjct: 90  NGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIV 149

Query: 254 MDGNGTLFGTLCGNSRKVVHKFNVSLPNKQRRGGQSAPRFGRIRVEKRHNYVMNIAELAT 75
           MDGNGTLFGTL GN+R+V+HKF V LP K  RGGQSA RF R+R+EKRHNYV   AELAT
Sbjct: 150 MDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELAT 209

Query: 74  QFFISPVTNQPNVAGLILAGSAD 6
           QFFI+P T+QPNVAGLILAGSAD
Sbjct: 210 QFFINPATSQPNVAGLILAGSAD 232


>ref|XP_002321067.1| predicted protein [Populus trichocarpa] gi|222861840|gb|EEE99382.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  314 bits (804), Expect = 9e-84
 Identities = 156/203 (76%), Positives = 175/203 (86%)
 Frame = -1

Query: 614 GTSMISLLLPPRTQLSDVTRRLMHEHGTAKNIKSRVNRQSVLSAITYAQQRLKLYTKVPP 435
           GTSMISL++PPR Q+S VT+ L  E GTA NIKSRVNRQSVL AIT AQQRLKLY KVPP
Sbjct: 30  GTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPP 89

Query: 434 NGLVL*VGIVLNDNGKEERVTIDFEPFKPINTSVYLCDNKFHTEALYQLLESDDKFGFIV 255
           NGLVL  G ++ ++GKE++VTIDFEPFKPIN S+YLCDNKFHTEAL +LLESDDKFGFIV
Sbjct: 90  NGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIV 149

Query: 254 MDGNGTLFGTLCGNSRKVVHKFNVSLPNKQRRGGQSAPRFGRIRVEKRHNYVMNIAELAT 75
           MDGNGTLFGTL GN+R+V+HKF V LP K  RGGQSA RF R+R+EKRHNYV   AELAT
Sbjct: 150 MDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELAT 209

Query: 74  QFFISPVTNQPNVAGLILAGSAD 6
           QFFI+P T+QPNVAGLILAGSAD
Sbjct: 210 QFFINPATSQPNVAGLILAGSAD 232


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