BLASTX nr result
ID: Bupleurum21_contig00021457
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00021457
(1692 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 812 0.0
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 809 0.0
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 807 0.0
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2... 805 0.0
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 802 0.0
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 812 bits (2098), Expect = 0.0
Identities = 388/522 (74%), Positives = 450/522 (86%), Gaps = 5/522 (0%)
Frame = -1
Query: 1692 VIELIGAEEEEDCRTAWGTEYLMKENGGDPPMKYTHCELDMSFCLGLSSGLVPFTNHDNA 1513
++ELIGAEEEEDC TAWG +YL+K + DPP+KYTHCELDMSF LGLS G++P+ NHD+A
Sbjct: 677 IVELIGAEEEEDCSTAWGIKYLLKGHD-DPPVKYTHCELDMSFLLGLSCGIIPYANHDHA 735
Query: 1512 KRALYQSQKHSHQAIGYSTTNPNIRVDTISHQLYYPQKPLFRTMLSDCLESPGSNP---- 1345
+R LYQS+KHS QAIG+STTNPNIRVDT+SHQLYYPQ+PLFRTM+SDCL PG +
Sbjct: 736 RRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKG 795
Query: 1344 -TSRPEFYNGQCAIVSVNVHFGYNQEDSIVMNRASTERGMFRSEHIRSYKADVYNKEAYS 1168
RPE++NGQ AIV+VNVH GYNQEDS+VMNRAS ERGMFRSEHIRSYK++V N E+
Sbjct: 796 IVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLD 855
Query: 1167 TSQKIEDEMKFGKTYSKVGRVDSLEEDGFPYIGASLRPGDIIIGKCADSGNDQSLKLKHT 988
+K ED + FGK SK+GRVDSL++DGFP+IGA+L+ GDI+IG+CA+SG D S+KLKHT
Sbjct: 856 KKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHT 915
Query: 987 EGGKVHKVVLSANDSGKTFGIVSLRQVRSPSMGDKFSSMHGQKGVLGFLESQENFPFTAQ 808
E G V KVV+SAND GK F +VSLRQVR+P +GDKFSSMHGQKGVLGFLESQENFPFT Q
Sbjct: 916 ERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQ 975
Query: 807 GIVPDIVINPRAFPSRQTPGQLLEAALGKGIALGGNEKYATPFSSLSVDGIANQLHKAGF 628
GIVPDIVINP AFPSRQTPGQLLEAALGKGIA GG ++ATPFS+LSVD IA+QLH+AGF
Sbjct: 976 GIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGF 1035
Query: 627 ARWGNERVYDGRTGEMCSSLVFMGPTCYQRLTHMAEDKVKFRNIGPVHPLTRQPVADRKR 448
+RWG+ERVY+GRTGEM SL+FMGPT YQRL HMAEDKVKFRN GPVHPLTRQPV+DRKR
Sbjct: 1036 SRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKR 1095
Query: 447 FGGVKFGEMERDCLIAHGATANLQERLFLCSDYSEMHICGTCKHSANVIQRTVMGKHKIR 268
FGG+KFGEMERDCLIAHGA ANL ERLF SD + MHIC CK+ +NVIQR+V G K+R
Sbjct: 1096 FGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVR 1155
Query: 267 GPYCRYCESAENVVKVRVPFGTKLLCQELFGMGISMKFETKV 142
GPYCRYCES+E +VKV VP+G KLLCQELF MGIS+KFET++
Sbjct: 1156 GPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQL 1197
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
Length = 1019
Score = 809 bits (2090), Expect = 0.0
Identities = 386/522 (73%), Positives = 441/522 (84%), Gaps = 5/522 (0%)
Frame = -1
Query: 1692 VIELIGAEEEEDCRTAWGTEYLMKENGGDPPMKYTHCELDMSFCLGLSSGLVPFTNHDNA 1513
VIE IG EEEEDCRTAWG YL EN +KYTHCELDMSF LGLS+ ++PF NHD+A
Sbjct: 497 VIEFIGTEEEEDCRTAWGINYLFMENEAKATVKYTHCELDMSFLLGLSAAIIPFANHDHA 556
Query: 1512 KRALYQSQKHSHQAIGYSTTNPNIRVDTISHQLYYPQKPLFRTMLSDCLESPG-----SN 1348
+R LYQS+KHS QA+G++TTNPNIRVDT +HQLYYPQ+PLFRTM+SDCL PG +
Sbjct: 557 RRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQLYYPQRPLFRTMVSDCLGKPGYPLGHNG 616
Query: 1347 PTSRPEFYNGQCAIVSVNVHFGYNQEDSIVMNRASTERGMFRSEHIRSYKADVYNKEAYS 1168
R E++NGQCAIV+VNVH GYNQEDS+VMNRAS ERGMFRSEHIRSYKADV NKE+
Sbjct: 617 IVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESVG 676
Query: 1167 TSQKIEDEMKFGKTYSKVGRVDSLEEDGFPYIGASLRPGDIIIGKCADSGNDQSLKLKHT 988
K ED + FGK SK+GRVDSL++DGFP+IGA+L+ GDI++G+CA+SG D S+KLKHT
Sbjct: 677 KKPKFEDSVNFGKVQSKIGRVDSLDDDGFPFIGANLQNGDIVVGRCAESGADHSIKLKHT 736
Query: 987 EGGKVHKVVLSANDSGKTFGIVSLRQVRSPSMGDKFSSMHGQKGVLGFLESQENFPFTAQ 808
E G V KVVLSAND GK F +VSLRQVR+P +GDKFSSMHGQKGVLGFLESQENFPFT Q
Sbjct: 737 ERGMVQKVVLSANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQ 796
Query: 807 GIVPDIVINPRAFPSRQTPGQLLEAALGKGIALGGNEKYATPFSSLSVDGIANQLHKAGF 628
GIVPDIV+NP AFPSRQTPGQLLEAALGKGIA GG +KYATPFS+LSVD + +QLH+AGF
Sbjct: 797 GIVPDIVVNPHAFPSRQTPGQLLEAALGKGIACGGLQKYATPFSTLSVDAVTDQLHRAGF 856
Query: 627 ARWGNERVYDGRTGEMCSSLVFMGPTCYQRLTHMAEDKVKFRNIGPVHPLTRQPVADRKR 448
+RWG+ERVY+GRTGEM SLVFMGPT YQRLTHM+EDKVKFRN GPVHPLTRQPVADRKR
Sbjct: 857 SRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVADRKR 916
Query: 447 FGGVKFGEMERDCLIAHGATANLQERLFLCSDYSEMHICGTCKHSANVIQRTVMGKHKIR 268
FGG+KFGEMERDCLIAHGA ANL ERLF SD S+MHIC C + ANVIQR V G KIR
Sbjct: 917 FGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGGRKIR 976
Query: 267 GPYCRYCESAENVVKVRVPFGTKLLCQELFGMGISMKFETKV 142
GPYCR+CES E +V+V VP+G KLL QELF MGI+MKF+T++
Sbjct: 977 GPYCRFCESVEEIVRVNVPYGAKLLAQELFSMGITMKFDTEL 1018
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 807 bits (2085), Expect = 0.0
Identities = 387/522 (74%), Positives = 439/522 (84%), Gaps = 5/522 (0%)
Frame = -1
Query: 1692 VIELIGAEEEEDCRTAWGTEYLMKENGGDPPMKYTHCELDMSFCLGLSSGLVPFTNHDNA 1513
+IE +G EEEEDC TAWG ++L+ G +KYTHCELDMSF LGLS G++PF NHD+A
Sbjct: 681 IIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTHCELDMSFLLGLSCGIIPFANHDHA 740
Query: 1512 KRALYQSQKHSHQAIGYSTTNPNIRVDTISHQLYYPQKPLFRTMLSDCLESPGSNP---- 1345
+R LYQ+QKHS QAIG+ TTNPNIRVDT+SHQLYYPQ+PLFRT+ SDCL PG
Sbjct: 741 RRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNG 800
Query: 1344 -TSRPEFYNGQCAIVSVNVHFGYNQEDSIVMNRASTERGMFRSEHIRSYKADVYNKEAYS 1168
+PE YNGQ AIV+VNVH GYNQEDS+VMNRAS ERGMFRSEHIRSYKADV NKE
Sbjct: 801 IVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLD 860
Query: 1167 TSQKIEDEMKFGKTYSKVGRVDSLEEDGFPYIGASLRPGDIIIGKCADSGNDQSLKLKHT 988
+K +D + FGK SK+GRVDSL++DGFP+IGA+L+ GDI+IG+CA+SG D S+KLKHT
Sbjct: 861 KRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHT 920
Query: 987 EGGKVHKVVLSANDSGKTFGIVSLRQVRSPSMGDKFSSMHGQKGVLGFLESQENFPFTAQ 808
E G V KVVLS+ND GK F +VSLRQVRSP +GDKFSSMHGQKGVLGFLESQENFPFT Q
Sbjct: 921 ERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQ 980
Query: 807 GIVPDIVINPRAFPSRQTPGQLLEAALGKGIALGGNEKYATPFSSLSVDGIANQLHKAGF 628
GIVPDIVINP +FPSRQTPGQLLEAALGKGIA GG+ KYATPFS+LSV+ I NQLH+AGF
Sbjct: 981 GIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGF 1040
Query: 627 ARWGNERVYDGRTGEMCSSLVFMGPTCYQRLTHMAEDKVKFRNIGPVHPLTRQPVADRKR 448
+RWGNERVY+GRTGEM SL+FMGPT YQRL HMAEDKVKFRN GPVHPLTRQPVADRKR
Sbjct: 1041 SRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKR 1100
Query: 447 FGGVKFGEMERDCLIAHGATANLQERLFLCSDYSEMHICGTCKHSANVIQRTVMGKHKIR 268
FGG+KFGEMERDCLIAHGA+ANL ERLF SD S+MHIC CK+ ANVIQR V G KIR
Sbjct: 1101 FGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIR 1160
Query: 267 GPYCRYCESAENVVKVRVPFGTKLLCQELFGMGISMKFETKV 142
GPYCR CES + +VKV VP+G KLLCQELF MGIS+KFET++
Sbjct: 1161 GPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGISLKFETRL 1202
>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
predicted protein [Populus trichocarpa]
Length = 1160
Score = 805 bits (2079), Expect = 0.0
Identities = 387/517 (74%), Positives = 443/517 (85%)
Frame = -1
Query: 1692 VIELIGAEEEEDCRTAWGTEYLMKENGGDPPMKYTHCELDMSFCLGLSSGLVPFTNHDNA 1513
+IE IG EEEEDC TAWG ++L+ + G PMKY+HCELDMSF LGLS G++PF NHD+A
Sbjct: 649 IIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHA 708
Query: 1512 KRALYQSQKHSHQAIGYSTTNPNIRVDTISHQLYYPQKPLFRTMLSDCLESPGSNPTSRP 1333
+R LYQ+QKHS QAIG+STTNPNIRVDT+SHQL+YPQ+PLFRTM+SDCL P +P
Sbjct: 709 RRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTMISDCLVLP------KP 762
Query: 1332 EFYNGQCAIVSVNVHFGYNQEDSIVMNRASTERGMFRSEHIRSYKADVYNKEAYSTSQKI 1153
E +NGQ AIV+VNVH GYNQEDS+VMNRAS ERGMFRSEHIRSYKA+V NKE +K
Sbjct: 763 ELFNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKS 822
Query: 1152 EDEMKFGKTYSKVGRVDSLEEDGFPYIGASLRPGDIIIGKCADSGNDQSLKLKHTEGGKV 973
ED + FGK SK+GRVDSL++DGFP+IGA+++ GDI+IGKCA+SG D S+KLKHTE G V
Sbjct: 823 EDSITFGKIQSKIGRVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMV 882
Query: 972 HKVVLSANDSGKTFGIVSLRQVRSPSMGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPD 793
KVVLS+ND GK F +VSLRQVRSP +GDKFSSMHGQKGVLGFLESQENFPFT QG+VPD
Sbjct: 883 QKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPD 942
Query: 792 IVINPRAFPSRQTPGQLLEAALGKGIALGGNEKYATPFSSLSVDGIANQLHKAGFARWGN 613
IVINP AFPSRQTPGQLLEAALGKGIA GG+++YATPFS+LSVD I +QLH+A F+RWGN
Sbjct: 943 IVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGN 1002
Query: 612 ERVYDGRTGEMCSSLVFMGPTCYQRLTHMAEDKVKFRNIGPVHPLTRQPVADRKRFGGVK 433
ERVY+GRTGEM SL+FMGPT YQRL HMAEDKVKFRN GPVHPLTRQPVADRKRFGG+K
Sbjct: 1003 ERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIK 1062
Query: 432 FGEMERDCLIAHGATANLQERLFLCSDYSEMHICGTCKHSANVIQRTVMGKHKIRGPYCR 253
FGEMERDCLIAHGA+ANL ERLF SD SEMHIC CK+ ANVIQR V G KIRGPYCR
Sbjct: 1063 FGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCR 1122
Query: 252 YCESAENVVKVRVPFGTKLLCQELFGMGISMKFETKV 142
CES +++VKV VP+G KLLCQELF MGIS+KF+T+V
Sbjct: 1123 VCESVDDLVKVSVPYGAKLLCQELFSMGISLKFDTRV 1159
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 802 bits (2071), Expect = 0.0
Identities = 384/517 (74%), Positives = 445/517 (86%)
Frame = -1
Query: 1692 VIELIGAEEEEDCRTAWGTEYLMKENGGDPPMKYTHCELDMSFCLGLSSGLVPFTNHDNA 1513
++ELIGAEEEEDC TAWG +YL+K + DPP+KYTHCELDMSF LGLS G++P+ NHD+A
Sbjct: 713 IVELIGAEEEEDCSTAWGIKYLLKGHD-DPPVKYTHCELDMSFLLGLSCGIIPYANHDHA 771
Query: 1512 KRALYQSQKHSHQAIGYSTTNPNIRVDTISHQLYYPQKPLFRTMLSDCLESPGSNPTSRP 1333
+R LYQS+KHS QAIG+STTNPNIRVDT+SHQLYYPQ+PLFRTM+SD RP
Sbjct: 772 RRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDL---------PRP 822
Query: 1332 EFYNGQCAIVSVNVHFGYNQEDSIVMNRASTERGMFRSEHIRSYKADVYNKEAYSTSQKI 1153
E++NGQ AIV+VNVH GYNQEDS+VMNRAS ERGMFRSEHIRSYK++V N E+ +K
Sbjct: 823 EYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKS 882
Query: 1152 EDEMKFGKTYSKVGRVDSLEEDGFPYIGASLRPGDIIIGKCADSGNDQSLKLKHTEGGKV 973
ED + FGK SK+GRVDSL++DGFP+IGA+L+ GDI+IG+CA+SG D S+KLKHTE G V
Sbjct: 883 EDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMV 942
Query: 972 HKVVLSANDSGKTFGIVSLRQVRSPSMGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPD 793
KVV+SAND GK F +VSLRQVR+P +GDKFSSMHGQKGVLGFLESQENFPFT QGIVPD
Sbjct: 943 QKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPD 1002
Query: 792 IVINPRAFPSRQTPGQLLEAALGKGIALGGNEKYATPFSSLSVDGIANQLHKAGFARWGN 613
IVINP AFPSRQTPGQLLEAALGKGIA GG ++ATPFS+LSVD IA+QLH+AGF+RWG+
Sbjct: 1003 IVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGH 1062
Query: 612 ERVYDGRTGEMCSSLVFMGPTCYQRLTHMAEDKVKFRNIGPVHPLTRQPVADRKRFGGVK 433
ERVY+GRTGEM SL+FMGPT YQRL HMAEDKVKFRN GPVHPLTRQPV+DRKRFGG+K
Sbjct: 1063 ERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIK 1122
Query: 432 FGEMERDCLIAHGATANLQERLFLCSDYSEMHICGTCKHSANVIQRTVMGKHKIRGPYCR 253
FGEMERDCLIAHGA ANL ERLF SD + MHIC CK+ +NVIQR+V G K+RGPYCR
Sbjct: 1123 FGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCR 1182
Query: 252 YCESAENVVKVRVPFGTKLLCQELFGMGISMKFETKV 142
YCES+E +VKV VP+G KLLCQELF MGIS+KFET++
Sbjct: 1183 YCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQL 1219