BLASTX nr result

ID: Bupleurum21_contig00021432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021432
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV32822.1| transposase [Zea mays]                                  71   2e-16
ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing...    73   2e-15
gb|ABD32595.1| HAT dimerisation [Medicago truncatula]                  73   2e-15
emb|CAN78233.1| hypothetical protein VITISV_027466 [Vitis vinifera]    79   3e-15
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]    69   5e-15

>gb|AAV32822.1| transposase [Zea mays]
          Length = 674

 Score = 71.2 bits (173), Expect(2) = 2e-16
 Identities = 34/65 (52%), Positives = 50/65 (76%)
 Frame = -3

Query: 522 NNMFEKTELDKYLEEKRLNRNVELDILDYWKTNQY*YPNLALMARDILSIPISTVASESA 343
           +N   K+ELDKYL E+  +  ++LD+L +WK ++  +P L+ +ARD+L+IPIS+VASESA
Sbjct: 530 SNSNNKSELDKYLAEETEDTEMKLDLLVWWKASEQRFPILSRLARDVLAIPISSVASESA 589

Query: 342 FSIGG 328
           FS GG
Sbjct: 590 FSTGG 594



 Score = 39.7 bits (91), Expect(2) = 2e-16
 Identities = 15/25 (60%), Positives = 21/25 (84%)
 Frame = -2

Query: 331 GRVLDQYRSSLAHVVVESLICTRDW 257
           GR+LD +RSSL   ++ESL+CT+DW
Sbjct: 594 GRILDDFRSSLTPFMLESLVCTQDW 618


>ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing protein 1-like [Glycine
            max]
          Length = 1038

 Score = 73.2 bits (178), Expect(2) = 2e-15
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = -3

Query: 573  SNNGSMTEFDALDNDLCNNMFEKTELDKYLEEKRLNRNVELDILDYWKTNQY*YPNLALM 394
            S+NG +T+FDA   +  +    K+ELD+YLEE  L R  + D+L +WK N+  YP L+ M
Sbjct: 919  SDNG-LTDFDAYIMETTSQQ-TKSELDQYLEESLLPRVPDFDVLAWWKLNKIKYPTLSKM 976

Query: 393  ARDILSIPISTVASESAF 340
            ARDILSIP+STVA +S F
Sbjct: 977  ARDILSIPVSTVAPDSVF 994



 Score = 34.7 bits (78), Expect(2) = 2e-15
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = -2

Query: 334  RGRVLDQYRSSLAHVVVESLICTRDW 257
            + + +D+YRSSL    +E+L+CT+DW
Sbjct: 997  KSKEIDEYRSSLRPETLEALVCTKDW 1022


>gb|ABD32595.1| HAT dimerisation [Medicago truncatula]
          Length = 132

 Score = 73.2 bits (178), Expect(2) = 2e-15
 Identities = 35/60 (58%), Positives = 45/60 (75%)
 Frame = -3

Query: 507 KTELDKYLEEKRLNRNVELDILDYWKTNQY*YPNLALMARDILSIPISTVASESAFSIGG 328
           +TE+D YL E R  +N + DIL++WK N   YP   L++RDIL++PISTVASESAFS GG
Sbjct: 9   QTEVDIYLSESREKKNPDFDILNWWKVNSTKYPTHGLISRDILAMPISTVASESAFSTGG 68



 Score = 34.3 bits (77), Expect(2) = 2e-15
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -2

Query: 331 GRVLDQYRSSLAHVVVESLICTRDWKFSEEVVANYS*EDLTEDIMDI-ALSESTPP 167
           GRVL  YRSSL    VE+LIC ++W  S  +       D+ E + D+  L E   P
Sbjct: 68  GRVLSCYRSSLTTHTVEALICAQNWLRSSPLSV-----DIEEQLEDLEKLEEELAP 118


>emb|CAN78233.1| hypothetical protein VITISV_027466 [Vitis vinifera]
          Length = 805

 Score = 79.0 bits (193), Expect(2) = 3e-15
 Identities = 39/77 (50%), Positives = 49/77 (63%)
 Frame = -3

Query: 558 MTEFDALDNDLCNNMFEKTELDKYLEEKRLNRNVELDILDYWKTNQY*YPNLALMARDIL 379
           +++FD   +        K+ELD YLEE  L RN   D+L +WKTN   YP L +  RDI 
Sbjct: 443 LSKFDLFVHSTIGESHTKSELDYYLEESILPRNSNFDVLSWWKTNGIKYPTLQMTVRDIY 502

Query: 378 SIPISTVASESAFSIGG 328
           +IP+STVASESAFS GG
Sbjct: 503 AIPVSTVASESAFSTGG 519



 Score = 28.1 bits (61), Expect(2) = 3e-15
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 331 GRVLDQYRSSLAHVVVESLICTRD--WKFSEEVVANY 227
           GRV+ ++R+ L    +E+L+C +   WK  EE ++ Y
Sbjct: 519 GRVVSKHRTRLHLDTLEALMCAQSWLWKKKEEQISKY 555


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score = 68.9 bits (167), Expect(2) = 5e-15
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = -3

Query: 579  LSSNNGSMTEFDALDNDLCNNMFEKTELDKYLEEKRLNRNVELDILDYWKTNQY*YPNLA 400
            L S++  +++FD   +++      ++ELD+YL+E  + R+ + D+L +WK N+  YP L+
Sbjct: 918  LLSDSDRLSDFDVYISEISGGQDMRSELDQYLDESLMPRSQDFDVLAWWKLNKLKYPTLS 977

Query: 399  LMARDILSIPISTVASESAFSIGG 328
             MA DILSIPI+TV  ++ F   G
Sbjct: 978  RMASDILSIPITTVGPDNVFDTVG 1001



 Score = 37.4 bits (85), Expect(2) = 5e-15
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = -2

Query: 331  GRVLDQYRSSLAHVVVESLICTRDW 257
            GR +D YRSSL  V +E+LIC +DW
Sbjct: 1001 GRKIDSYRSSLRPVTLEALICAKDW 1025


Top