BLASTX nr result

ID: Bupleurum21_contig00021426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021426
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22144.3| unnamed protein product [Vitis vinifera]              111   8e-23
ref|XP_002266405.1| PREDICTED: uncharacterized protein LOC100253...   111   8e-23
ref|XP_002509622.1| conserved hypothetical protein [Ricinus comm...   108   7e-22
emb|CAN79336.1| hypothetical protein VITISV_026089 [Vitis vinifera]   107   9e-22
ref|XP_002304439.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21

>emb|CBI22144.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score =  111 bits (277), Expect = 8e-23
 Identities = 77/183 (42%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
 Frame = +2

Query: 2   SNPSRTASEHLKRGTCPNYNLLPKPGSDPVQDPGLGPTLHSPQVKHXXXXXXXXXXXXXX 181
           SNPSRTASEHLKRGTCPN+N +PKP S         P   S  V+H              
Sbjct: 127 SNPSRTASEHLKRGTCPNFNSVPKPISSISPSSMASP---SSSVQHNHRKRSSSSSGGGG 183

Query: 182 XXXXXXXXTNSTQ-NQVYNVDASRLSVELAAXXXXXXXXXXVVFSQQHSVALSGGKEDLN 358
                   + S Q + +  VD SR   ELA             +S    + LSGGKEDL 
Sbjct: 184 GGVGGGGSSASYQVSPLAMVDPSRFCGELA-------------YSPAQHLMLSGGKEDLG 230

Query: 359 ALAMFEDXXXXXXXXXXXXXXXXXXXXXXX-FDSLADWVYECCGSVSLSCLDHPKFKAFL 535
           ALAM ED                        FD LADW+YE CGSVS S LDHPKF+AFL
Sbjct: 231 ALAMLEDSVKKLKSPKTSPGPALSKTQIDSAFDFLADWLYESCGSVSFSSLDHPKFRAFL 290

Query: 536 NQV 544
           NQV
Sbjct: 291 NQV 293


>ref|XP_002266405.1| PREDICTED: uncharacterized protein LOC100253287 [Vitis vinifera]
          Length = 758

 Score =  111 bits (277), Expect = 8e-23
 Identities = 77/183 (42%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
 Frame = +2

Query: 2   SNPSRTASEHLKRGTCPNYNLLPKPGSDPVQDPGLGPTLHSPQVKHXXXXXXXXXXXXXX 181
           SNPSRTASEHLKRGTCPN+N +PKP S         P   S  V+H              
Sbjct: 79  SNPSRTASEHLKRGTCPNFNSVPKPISSISPSSMASP---SSSVQHNHRKRSSSSSGGGG 135

Query: 182 XXXXXXXXTNSTQ-NQVYNVDASRLSVELAAXXXXXXXXXXVVFSQQHSVALSGGKEDLN 358
                   + S Q + +  VD SR   ELA             +S    + LSGGKEDL 
Sbjct: 136 GGVGGGGSSASYQVSPLAMVDPSRFCGELA-------------YSPAQHLMLSGGKEDLG 182

Query: 359 ALAMFEDXXXXXXXXXXXXXXXXXXXXXXX-FDSLADWVYECCGSVSLSCLDHPKFKAFL 535
           ALAM ED                        FD LADW+YE CGSVS S LDHPKF+AFL
Sbjct: 183 ALAMLEDSVKKLKSPKTSPGPALSKTQIDSAFDFLADWLYESCGSVSFSSLDHPKFRAFL 242

Query: 536 NQV 544
           NQV
Sbjct: 243 NQV 245


>ref|XP_002509622.1| conserved hypothetical protein [Ricinus communis]
           gi|223549521|gb|EEF51009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 792

 Score =  108 bits (269), Expect = 7e-22
 Identities = 78/202 (38%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
 Frame = +2

Query: 2   SNPSRTASEHLKRGTCPNYNLLPKP------GSDPVQDPGLGPTLHSPQ----------- 130
           SNPSRTASEHLKRGTCPN+N LPKP       S+    P    T+ SP            
Sbjct: 89  SNPSRTASEHLKRGTCPNFNSLPKPISSISPSSNTPPPPPPVATIASPSSGGGSGGGVVS 148

Query: 131 ---VKHXXXXXXXXXXXXXXXXXXXXXXTNSTQNQVYNVDASRLSVELAAXXXXXXXXXX 301
              + H                       +   + +  VD SR S ELA           
Sbjct: 149 ASAIVHNNRKRSAGASSGIVSATVPYVAPSYQVSPLAIVDPSRFSGELA----------- 197

Query: 302 VVFSQQHSVALSGGKEDLNALAMFEDXXXXXXXXXXXXXXXXXXXXXXX-FDSLADWVYE 478
           V+  QQ  + LSGGK+DL+ALAM E+                        FD LADWVYE
Sbjct: 198 VLPQQQQHLMLSGGKDDLDALAMLENSVKKLKSPKTSPGPALSKSQIDFAFDYLADWVYE 257

Query: 479 CCGSVSLSCLDHPKFKAFLNQV 544
            CGSVS S L+HPKF+AFLNQV
Sbjct: 258 SCGSVSFSALEHPKFRAFLNQV 279


>emb|CAN79336.1| hypothetical protein VITISV_026089 [Vitis vinifera]
          Length = 885

 Score =  107 bits (268), Expect = 9e-22
 Identities = 77/186 (41%), Positives = 86/186 (46%), Gaps = 5/186 (2%)
 Frame = +2

Query: 2   SNPSRTASEHLKRGTCPNYNLLPKPGSDPVQDPGLGPTLHSPQVKHXXXXXXXXXXXXXX 181
           SNPSRTASEHLKRGTCPN+N +PKP S         P   S  V+H              
Sbjct: 79  SNPSRTASEHLKRGTCPNFNSVPKPISSISPSSMASP---SSSVQHNHRKRSSSSSGGGG 135

Query: 182 XXXXXXXXTNSTQNQVYNVDASRLSVELAAXXXXXXXXXXV----VFSQQHSVALSGGKE 349
                        + +  VD SR   ELA                +  QQH + LSGGKE
Sbjct: 136 ---------GGVVSPLAMVDPSRFCGELAYSPAVSTTVVTASTGSLLPQQH-LMLSGGKE 185

Query: 350 DLNALAMFEDXXXXXXXXXXXXXXXXXXXXXXX-FDSLADWVYECCGSVSLSCLDHPKFK 526
           DL ALAM ED                        FD LADW+YE CGSVS S LDHPKF+
Sbjct: 186 DLGALAMLEDSVKKLKSPKTSPGPALSKTQIDSAFDFLADWLYESCGSVSFSSLDHPKFR 245

Query: 527 AFLNQV 544
           AFLNQV
Sbjct: 246 AFLNQV 251


>ref|XP_002304439.1| predicted protein [Populus trichocarpa] gi|222841871|gb|EEE79418.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  107 bits (266), Expect = 2e-21
 Identities = 74/182 (40%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
 Frame = +2

Query: 2   SNPSRTASEHLKRGTCPNYNLLPKPGSDPVQDPGLGPTLHSPQVKHXXXXXXXXXXXXXX 181
           SNPSRTASEHLKRGTCPN+N +PKP S    +  L P+  S                   
Sbjct: 77  SNPSRTASEHLKRGTCPNFNSVPKPISSISPNTALLPSPSSS------GGLSGSGGVASS 130

Query: 182 XXXXXXXXTNSTQNQVYNVDASRLSVELAAXXXXXXXXXXVVFSQQHSVALSGGKEDLNA 361
                   +    + +  VD SR S E+A            +  QQ  + LSGGKEDL A
Sbjct: 131 AYPVTAVGSTYQVSPLAIVDPSRFSGEMA------------MLPQQPHLMLSGGKEDLGA 178

Query: 362 LAMFEDXXXXXXXXXXXXXXXXXXXXXXX-FDSLADWVYECCGSVSLSCLDHPKFKAFLN 538
           LAM ED                         D LADWVYE CGSVS S L+HPKF+AFLN
Sbjct: 179 LAMLEDSVKRLKSPKTSPGQALSKTQIDCALDYLADWVYESCGSVSFSSLEHPKFRAFLN 238

Query: 539 QV 544
           QV
Sbjct: 239 QV 240


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