BLASTX nr result
ID: Bupleurum21_contig00021384
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00021384 (409 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN69669.1| hypothetical protein VITISV_019154 [Vitis vinifera] 73 9e-27 ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti... 73 9e-27 emb|CBI18552.3| unnamed protein product [Vitis vinifera] 73 9e-27 ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2... 77 8e-26 ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub... 72 2e-25 >emb|CAN69669.1| hypothetical protein VITISV_019154 [Vitis vinifera] Length = 876 Score = 73.2 bits (178), Expect(2) = 9e-27 Identities = 29/50 (58%), Positives = 39/50 (78%) Frame = +3 Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMRCNSQWTCLEKQEW 407 KPRSPILV +S++ LCDVGSPWR+QWKLF +L ++ + WT L++ EW Sbjct: 194 KPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEW 243 Score = 72.0 bits (175), Expect(2) = 9e-27 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%) Frame = +1 Query: 1 CNPVTRTFNILPRLGSAWSRHGSVLV-SKRAVLVLTELAVLYYSGS 135 CNP+TR+F +LP+LGSAWSRHGSVLV S VLVLTELA LY+SGS Sbjct: 136 CNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSGS 181 >ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera] Length = 374 Score = 73.2 bits (178), Expect(2) = 9e-27 Identities = 29/50 (58%), Positives = 39/50 (78%) Frame = +3 Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMRCNSQWTCLEKQEW 407 KPRSPILV +S++ LCDVGSPWR+QWKLF +L ++ + WT L++ EW Sbjct: 194 KPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEW 243 Score = 72.0 bits (175), Expect(2) = 9e-27 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%) Frame = +1 Query: 1 CNPVTRTFNILPRLGSAWSRHGSVLV-SKRAVLVLTELAVLYYSGS 135 CNP+TR+F +LP+LGSAWSRHGSVLV S VLVLTELA LY+SGS Sbjct: 136 CNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSGS 181 >emb|CBI18552.3| unnamed protein product [Vitis vinifera] Length = 294 Score = 73.2 bits (178), Expect(2) = 9e-27 Identities = 29/50 (58%), Positives = 39/50 (78%) Frame = +3 Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMRCNSQWTCLEKQEW 407 KPRSPILV +S++ LCDVGSPWR+QWKLF +L ++ + WT L++ EW Sbjct: 178 KPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEW 227 Score = 72.0 bits (175), Expect(2) = 9e-27 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%) Frame = +1 Query: 1 CNPVTRTFNILPRLGSAWSRHGSVLV-SKRAVLVLTELAVLYYSGS 135 CNP+TR+F +LP+LGSAWSRHGSVLV S VLVLTELA LY+SGS Sbjct: 120 CNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSGS 165 >ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1| predicted protein [Populus trichocarpa] Length = 376 Score = 76.6 bits (187), Expect(2) = 8e-26 Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%) Frame = +3 Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMRCN-SQWTCLEKQEW 407 KPRSPIL+ +S+ LCDVGSPWR+QWKLFT L + N + W CLE+QEW Sbjct: 198 KPRSPILISDSVFALCDVGSPWRSQWKLFTCILSKLNNNYNNWVCLERQEW 248 Score = 65.5 bits (158), Expect(2) = 8e-26 Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 2/47 (4%) Frame = +1 Query: 1 CNPVTRTFNILPRLGSAWSRHGSVLVS--KRAVLVLTELAVLYYSGS 135 CNP+TR F +LP+LGSAWSRHGSVLV V+VLTELA LY+S + Sbjct: 136 CNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFSNT 182 >ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297333503|gb|EFH63921.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] Length = 374 Score = 71.6 bits (174), Expect(2) = 2e-25 Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%) Frame = +3 Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMR-CNSQWTCLEKQEW 407 KPRSP+L+ S+ LCDVGSPWR+QWKLF+ L ++ ++ W CLEK EW Sbjct: 197 KPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKHEW 247 Score = 69.3 bits (168), Expect(2) = 2e-25 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 1/46 (2%) Frame = +1 Query: 1 CNPVTRTFNILPRLGSAWSRHGSVLV-SKRAVLVLTELAVLYYSGS 135 CNP+TR F +LP+LGSAWSRHG+VLV S V+VLTELA LYYSG+ Sbjct: 136 CNPLTRQFKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGT 181