BLASTX nr result

ID: Bupleurum21_contig00021384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021384
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69669.1| hypothetical protein VITISV_019154 [Vitis vinifera]    73   9e-27
ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti...    73   9e-27
emb|CBI18552.3| unnamed protein product [Vitis vinifera]               73   9e-27
ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2...    77   8e-26
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub...    72   2e-25

>emb|CAN69669.1| hypothetical protein VITISV_019154 [Vitis vinifera]
          Length = 876

 Score = 73.2 bits (178), Expect(2) = 9e-27
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +3

Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMRCNSQWTCLEKQEW 407
           KPRSPILV +S++ LCDVGSPWR+QWKLF  +L  ++ +  WT L++ EW
Sbjct: 194 KPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEW 243



 Score = 72.0 bits (175), Expect(2) = 9e-27
 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   CNPVTRTFNILPRLGSAWSRHGSVLV-SKRAVLVLTELAVLYYSGS 135
           CNP+TR+F +LP+LGSAWSRHGSVLV S   VLVLTELA LY+SGS
Sbjct: 136 CNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSGS 181


>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
          Length = 374

 Score = 73.2 bits (178), Expect(2) = 9e-27
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +3

Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMRCNSQWTCLEKQEW 407
           KPRSPILV +S++ LCDVGSPWR+QWKLF  +L  ++ +  WT L++ EW
Sbjct: 194 KPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEW 243



 Score = 72.0 bits (175), Expect(2) = 9e-27
 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   CNPVTRTFNILPRLGSAWSRHGSVLV-SKRAVLVLTELAVLYYSGS 135
           CNP+TR+F +LP+LGSAWSRHGSVLV S   VLVLTELA LY+SGS
Sbjct: 136 CNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSGS 181


>emb|CBI18552.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score = 73.2 bits (178), Expect(2) = 9e-27
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +3

Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMRCNSQWTCLEKQEW 407
           KPRSPILV +S++ LCDVGSPWR+QWKLF  +L  ++ +  WT L++ EW
Sbjct: 178 KPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEW 227



 Score = 72.0 bits (175), Expect(2) = 9e-27
 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   CNPVTRTFNILPRLGSAWSRHGSVLV-SKRAVLVLTELAVLYYSGS 135
           CNP+TR+F +LP+LGSAWSRHGSVLV S   VLVLTELA LY+SGS
Sbjct: 120 CNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSGS 165


>ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score = 76.6 bits (187), Expect(2) = 8e-26
 Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +3

Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMRCN-SQWTCLEKQEW 407
           KPRSPIL+ +S+  LCDVGSPWR+QWKLFT  L  +  N + W CLE+QEW
Sbjct: 198 KPRSPILISDSVFALCDVGSPWRSQWKLFTCILSKLNNNYNNWVCLERQEW 248



 Score = 65.5 bits (158), Expect(2) = 8e-26
 Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 2/47 (4%)
 Frame = +1

Query: 1   CNPVTRTFNILPRLGSAWSRHGSVLVS--KRAVLVLTELAVLYYSGS 135
           CNP+TR F +LP+LGSAWSRHGSVLV      V+VLTELA LY+S +
Sbjct: 136 CNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFSNT 182


>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333503|gb|EFH63921.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score = 71.6 bits (174), Expect(2) = 2e-25
 Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +3

Query: 258 KPRSPILVDESIVVLCDVGSPWRAQWKLFTVSLESMR-CNSQWTCLEKQEW 407
           KPRSP+L+  S+  LCDVGSPWR+QWKLF+  L ++   ++ W CLEK EW
Sbjct: 197 KPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKHEW 247



 Score = 69.3 bits (168), Expect(2) = 2e-25
 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   CNPVTRTFNILPRLGSAWSRHGSVLV-SKRAVLVLTELAVLYYSGS 135
           CNP+TR F +LP+LGSAWSRHG+VLV S   V+VLTELA LYYSG+
Sbjct: 136 CNPLTRQFKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGT 181


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