BLASTX nr result

ID: Bupleurum21_contig00021383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021383
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   116   5e-24
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              116   5e-24
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...   114   2e-23
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...   114   2e-23
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   104   2e-20

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  116 bits (290), Expect = 5e-24
 Identities = 62/85 (72%), Positives = 68/85 (80%), Gaps = 5/85 (5%)
 Frame = +3

Query: 405 RRSRGADA----GALERLKALRRDGRRSDS-DFQIKVADPIYDTVDEDEYESLVAKRRQE 569
           RRSRGA+A     AL+RLKALRR GRRSD   FQIKV DPIYDTVDEDEY+ LVAKRR+E
Sbjct: 12  RRSRGAEATARSDALQRLKALRRGGRRSDGVGFQIKVEDPIYDTVDEDEYDKLVAKRREE 71

Query: 570 AEEFVVDDDGLGYLDEGQEEDWSKA 644
              F+VDD+G GY DEGQEEDWS A
Sbjct: 72  FRGFIVDDNGSGYGDEGQEEDWSLA 96


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  116 bits (290), Expect = 5e-24
 Identities = 62/85 (72%), Positives = 68/85 (80%), Gaps = 5/85 (5%)
 Frame = +3

Query: 405 RRSRGADA----GALERLKALRRDGRRSDS-DFQIKVADPIYDTVDEDEYESLVAKRRQE 569
           RRSRGA+A     AL+RLKALRR GRRSD   FQIKV DPIYDTVDEDEY+ LVAKRR+E
Sbjct: 12  RRSRGAEATARSDALQRLKALRRGGRRSDGVGFQIKVEDPIYDTVDEDEYDKLVAKRREE 71

Query: 570 AEEFVVDDDGLGYLDEGQEEDWSKA 644
              F+VDD+G GY DEGQEEDWS A
Sbjct: 72  FRGFIVDDNGSGYGDEGQEEDWSLA 96


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score =  114 bits (286), Expect = 2e-23
 Identities = 60/94 (63%), Positives = 74/94 (78%), Gaps = 8/94 (8%)
 Frame = +3

Query: 387 DEQSSG---RRSRGADAGA----LERLKALRRDGRRSDSD-FQIKVADPIYDTVDEDEYE 542
           DEQ S    RRSRG++A A    LERLKA+R  GRRS++  FQ+K+ +PIYDT+ EDEY+
Sbjct: 3   DEQPSASNRRRSRGSEAAARLTALERLKAIRSGGRRSEAGGFQVKLENPIYDTIPEDEYD 62

Query: 543 SLVAKRRQEAEEFVVDDDGLGYLDEGQEEDWSKA 644
           +LVAKRR+E   F+VDDDGLGY DEG+EEDWSKA
Sbjct: 63  ALVAKRREEVRGFIVDDDGLGYGDEGEEEDWSKA 96


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score =  114 bits (286), Expect = 2e-23
 Identities = 60/94 (63%), Positives = 74/94 (78%), Gaps = 8/94 (8%)
 Frame = +3

Query: 387 DEQSSG---RRSRGADAGA----LERLKALRRDGRRSDSD-FQIKVADPIYDTVDEDEYE 542
           DEQ S    RRSRG++A A    LERLKA+R  GRRS++  FQ+K+ +PIYDT+ EDEY+
Sbjct: 3   DEQPSASNRRRSRGSEAAARLTALERLKAIRSGGRRSEAGGFQVKLENPIYDTIPEDEYD 62

Query: 543 SLVAKRRQEAEEFVVDDDGLGYLDEGQEEDWSKA 644
           +LVAKRR+E   F+VDDDGLGY DEG+EEDWSKA
Sbjct: 63  ALVAKRREEVRGFIVDDDGLGYGDEGEEEDWSKA 96


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
           gi|223537171|gb|EEF38804.1| DNA polymerase alpha
           catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  104 bits (259), Expect = 2e-20
 Identities = 54/86 (62%), Positives = 68/86 (79%), Gaps = 6/86 (6%)
 Frame = +3

Query: 405 RRSRG----ADAGALERLKALRRDGRRSDSD--FQIKVADPIYDTVDEDEYESLVAKRRQ 566
           RR+RG    A A ALERLKALR+ GRRS++   + IK+  PI+DTV ED+Y+ LVA+RR 
Sbjct: 12  RRTRGPEATARASALERLKALRQGGRRSENGAGYDIKMETPIFDTVSEDDYDKLVAQRRL 71

Query: 567 EAEEFVVDDDGLGYLDEGQEEDWSKA 644
           EA+ F+VDDDGLGY DEG+EEDWS+A
Sbjct: 72  EAQGFIVDDDGLGYGDEGEEEDWSQA 97


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