BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021378
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   197   2e-48
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   168   2e-39
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   159   1e-36
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           158   2e-36
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...   156   6e-36

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  197 bits (502), Expect = 2e-48
 Identities = 107/326 (32%), Positives = 164/326 (50%), Gaps = 5/326 (1%)
 Frame = +1

Query: 1    KSSCFFSSVPLSTIQQTLRRCNFIWDSLPVKFLGLPLLSSSPNEMECRPLIDRICARIES 180
            KS  F S V  +  +Q +    F    LP+K+LG+PLLSS    + C+ L+DRI +++  
Sbjct: 27   KSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSKVRH 86

Query: 181  WTAKFLSFTGRLQLIKAVLFSIQGFWSTFLFLPLKILDKLQSIFARFLWSGKLEGSCSFK 360
            WT + LS+ GR+QLI +VLFSIQ +W++   LP +++  ++ I   FLWSG    +   K
Sbjct: 87   WTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAK 146

Query: 361  VAWKDCTSYKCCGGLGIRDLKLWNKAAVLYQIWRIISCQRNSLWTKWFNESFLKGKAFWT 540
            VAW      K  GGLGI+ +K WNK A+L  IW + +    S+W+ W   + L+G+ FWT
Sbjct: 147  VAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWT 206

Query: 541  MLVPRNCAWCIKKILNARPDAMNHVGYSIGAGNKTLLWHDPWMNGRIPIQVFGPEVITIL 720
            +  P+NC+W   KIL  R  A   + Y IG G  T LW D W         +G   I   
Sbjct: 207  IKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDS 266

Query: 721  QSHSMASISSVLVNGSWYLPSNHYLA----NEFRNLISQVALQREDQVRWDDMNGSKISL 888
                 A ++ ++ N  W  P+   +      E     S   + ++D++ W D    + S+
Sbjct: 267  GMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSV 326

Query: 889  SYIYHSFIQH-SCTNWSSFVWFPASI 963
               +    +H     W   VWF  ++
Sbjct: 327  KVAWEQLRRHRQMVEWHDIVWFKNAV 352


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  168 bits (425), Expect = 2e-39
 Identities = 115/334 (34%), Positives = 171/334 (51%), Gaps = 14/334 (4%)
 Frame = +1

Query: 1    KSSCFFSSVPLSTIQQTLRRCNFIWDSLPVKFLGLPLLSSSPNEMECRPLIDRICARIES 180
            KS+ F + +  +     L++  F   +LPVK+LGLPLL+    + +  PL+++I ARI S
Sbjct: 887  KSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITS 946

Query: 181  WTAKFLSFTGRLQLIKAVLFSIQGFWSTFLFLPLKILDKLQSIFARFLWSGKLEGSCSFK 360
            WT +FLSF GRLQLIK+VL SI  FW +   LP   L +++ +F+ FLWSG    +   K
Sbjct: 947  WTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAK 1006

Query: 361  VAWKDCTSYKCCGGLGIRDLKLWNKAAVLYQIWRIISCQRNSLWTKWFNESFLKGKAFWT 540
            +AW +    K  GGLG++ LK  N+ ++L  IWRI+S  R+SLW KW N+  ++ + FW+
Sbjct: 1007 IAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSA-RDSLWVKWVNKHLIRKETFWS 1065

Query: 541  MLVPRNC---AWCIKKILNARPDAMNHVGYSIGAGNKTLLWHDPWMN-GRIPIQVFGPEV 708
              V  N    +W  +KIL  R  A       + +G  T  WHD W   GR+  Q  G   
Sbjct: 1066 --VKENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFTSFWHDHWCPLGRLH-QHMGSRG 1122

Query: 709  ITILQSHSMASISSVLVNGSWYLPSNHYLANEFRNLISQVALQREDQVR------W---D 861
               L   + A+++ V+           + A+    + SQ+ L R+D+        W   +
Sbjct: 1123 TIDLGIPNNATVAEVMNTHR----RKRHRADFLNQIKSQIELARQDRSTDGDRSLWKQKE 1178

Query: 862  DMNGSKISLSYIYHSFIQHSC-TNWSSFVWFPAS 960
            D   S  S S  +      S   +W   VWF AS
Sbjct: 1179 DTFKSSFSSSKTWQQIRSISLRCDWYRGVWFSAS 1212


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  159 bits (401), Expect = 1e-36
 Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 10/331 (3%)
 Frame = +1

Query: 1    KSSCFFSSVPLSTIQQTLRRCNFIWDSLPVKFLGLPLLSSSPNEMECRPLIDRICARIES 180
            KS  F + + LS  + T     F   + P+++LGLPL+       +  PL++++ AR+ S
Sbjct: 594  KSQLFQAGLDLSE-RITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRS 652

Query: 181  WTAKFLSFTGRLQLIKAVLFSIQGFWSTFLFLPLKILDKLQSIFARFLWSGKLEGSCSFK 360
            W +K LSF GR QLI +V+F +  FW +   LP   + K++S+ ++FLW+G ++G  S K
Sbjct: 653  WVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSK 712

Query: 361  VAWKDCTSYKCCGGLGIRDLKLWNKAAVLYQIWRIISCQRNSLWTKWFNESFLKGKAFWT 540
            V+W DC   K  GGLG R    WNK  +L  IW ++  +  SLW +W     L   +FW 
Sbjct: 713  VSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIW-VLFDRDTSLWAQWQRHHRLGHASFWQ 771

Query: 541  MLVPRNCAWCIKKILNARPDAMNHVGYSIGAGNKTLLWHDPWMNGRIPIQVFGPEVITIL 720
            +   +   W  K +LN RP A   +   +G G     W D W +    I+  G      L
Sbjct: 772  VNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPL 831

Query: 721  QSHSMASISSVLVNGSWYLPSNHYLANEFRNLISQVA-------LQREDQVRW--DDMNG 873
            +    A ++  +    W LP +  L  +  +++S +A       L   D   W  DD++ 
Sbjct: 832  RIPFSAKVADAIDGSGWRLPLSRSLTAD--SILSHLASLPPPSPLMVSDSYSWCVDDVDC 889

Query: 874  SKISLSYIYHSF-IQHSCTNWSSFVWFPASI 963
               S +  +     +     W+  VWF  ++
Sbjct: 890  QGFSAAKTWEVLRPRRPVKRWAKSVWFKGAV 920


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  158 bits (400), Expect = 2e-36
 Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 10/331 (3%)
 Frame = +1

Query: 1    KSSCFFSSVPLSTIQQTLRRCNFIWDSLPVKFLGLPLLSSSPNEMECRPLIDRICARIES 180
            KS  F + + LS  + T     F   + P+++LGLPL+       +  PL++++ AR+ S
Sbjct: 594  KSQLFQAGLDLSE-RITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRS 652

Query: 181  WTAKFLSFTGRLQLIKAVLFSIQGFWSTFLFLPLKILDKLQSIFARFLWSGKLEGSCSFK 360
            W +K LSF GR QLI +V+F +  FW +   LP   + K++S+ ++FLW+G ++G  S K
Sbjct: 653  WVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSK 712

Query: 361  VAWKDCTSYKCCGGLGIRDLKLWNKAAVLYQIWRIISCQRNSLWTKWFNESFLKGKAFWT 540
            V+W DC   K  GGLG R    WNK  +L  IW ++  +  SLW +W     L   +FW 
Sbjct: 713  VSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIW-VLFDRDTSLWAQWQRHHRLGHASFWQ 771

Query: 541  MLVPRNCAWCIKKILNARPDAMNHVGYSIGAGNKTLLWHDPWMNGRIPIQVFGPEVITIL 720
            +   +   W  K +LN RP A   +   +G G     W D W +    I+  G      L
Sbjct: 772  VNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPL 831

Query: 721  QSHSMASISSVLVNGSWYLPSNHYLANEFRNLISQVA-------LQREDQVRW--DDMNG 873
            +    A ++  +    W LP +  L  +  +++S +A       L   D   W  DD++ 
Sbjct: 832  RIPFSAKVADAIDGSGWRLPLSRSLTAD--SILSHLASLPPPSPLMVSDSYSWCVDDVDC 889

Query: 874  SKISLSYIYHSF-IQHSCTNWSSFVWFPASI 963
               S +  +     +     W+  VWF  ++
Sbjct: 890  QGFSAAKTWEVLRPRRPVKRWARSVWFKGAV 920


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
            [Cucumis sativus]
          Length = 647

 Score =  156 bits (395), Expect = 6e-36
 Identities = 100/326 (30%), Positives = 153/326 (46%), Gaps = 13/326 (3%)
 Frame = +1

Query: 10   CFFSSVPLSTIQQTLRRCNFIW---------DSLPVKFLGLPLLSSSPNEMECRPLIDRI 162
            C   +  +S +++T++     W           L +++LGLPLLS      +C PLI  I
Sbjct: 186  CAADNYSMSFLKETIKSSKASWLAANMGFSIGHLLIRYLGLPLLSRRLRSSDCDPLIQCI 245

Query: 163  CARIESWTAKFLSFTGRLQLIKAVLFSIQGFWSTFLFLPLKILDKLQSIFARFLWSGKLE 342
             +RI SW+A+ LSF   LQL++ VL S+Q +W++   LP+K+   +  I   +LW GK E
Sbjct: 246  TSRIRSWSARVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLWRGKEE 305

Query: 343  GSCSFKVAWKDCTSYKCCGGLGIRDLKLWNKAAVLYQIWRIISCQRNSLWTKWFNESFLK 522
            G    KVAW +       GGL I D   WNKA+ L  +W ++  +  SLW  W     LK
Sbjct: 306  GRGGAKVAWDEVCLPFDEGGLAICDGSSWNKASTLKILW-LLLVKSGSLWVAWVEAYILK 364

Query: 523  GKAFWTMLVPRNCAWCIKKILNARPDAMNHVGYSIGAGNKTLLWHDPWMNGRIPIQVFGP 702
            G++ W +      +WC + IL  R     HV   +G   K  +  D W+ G + IQ+FG 
Sbjct: 365  GRSLWEIDAGAGRSWCFRAILRKRDILKAHVEMKLGNVRKCRMLLDAWIQGGMIIQLFGE 424

Query: 703  EVITILQSHSMASISSVL-VNGSWYLPSNHYLANEFRNLISQVALQREDQVRWDDMNGSK 879
             VI    S   A +   +  +G W          +  ++I  V L      RW  ++G  
Sbjct: 425  RVIYDAGSRRDARLMDFMGGDGDWRWSLVSLDLMDIWDMIQGVRLSPSVDDRWVWVSGRL 484

Query: 880  ISLSYI--YHSFIQHSC-TNWSSFVW 948
             S S +  + +   +S    WS  +W
Sbjct: 485  DSFSIVSAWETIRPNSSRVGWSGLLW 510