BLASTX nr result
ID: Bupleurum21_contig00021369
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00021369 (281 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFJ21663.1| F-box protein [Prunus avium] 64 1e-08 gb|ABO34164.1| truncated F-box protein 1 [Prunus armeniaca] 64 1e-08 gb|ABE27176.1| F-box 1 [Prunus armeniaca] 64 1e-08 emb|CAN90142.1| S haplotype-specific F-box protein [Prunus ceras... 62 4e-08 gb|AEX38307.1| S haplotype-specific F-box protein [Prunus armeni... 62 5e-08 >gb|AFJ21663.1| F-box protein [Prunus avium] Length = 380 Score = 64.3 bits (155), Expect = 1e-08 Identities = 36/91 (39%), Positives = 55/91 (60%) Frame = +1 Query: 4 SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183 SNGL+CI +T T I++WNP ++K +TLP S + P + + A+ FGF P +NDY V Sbjct: 120 SNGLVCISDDTLDTKSPIHIWNPSVRKFRTLPMSTN-PNVKFRYIALQFGFHPGVNDYKV 178 Query: 184 VYIVKYGLWDKPLTTYSCVTCVYSLNTNSWR 276 V +++ D + VYSL+T+SW+ Sbjct: 179 VRMLRVHKDD------AFAVEVYSLSTDSWK 203 >gb|ABO34164.1| truncated F-box protein 1 [Prunus armeniaca] Length = 181 Score = 63.9 bits (154), Expect = 1e-08 Identities = 35/92 (38%), Positives = 55/92 (59%) Frame = +1 Query: 4 SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183 SNGL+CI + T I++WNP ++K +TLP S ++ + + A+ FGF P +NDY V Sbjct: 98 SNGLVCISDDKLDTKSPIHIWNPSVRKFRTLPMSTNVKFR---YIALQFGFHPGVNDYKV 154 Query: 184 VYIVKYGLWDKPLTTYSCVTCVYSLNTNSWRK 279 V +++ D + VYSL+T+SW+K Sbjct: 155 VRMLRVHKDD------AFAVEVYSLSTDSWKK 180 >gb|ABE27176.1| F-box 1 [Prunus armeniaca] Length = 203 Score = 63.9 bits (154), Expect = 1e-08 Identities = 35/92 (38%), Positives = 55/92 (59%) Frame = +1 Query: 4 SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183 SNGL+CI + T I++WNP ++K +TLP S ++ + + A+ FGF P +NDY V Sbjct: 120 SNGLVCISDDKLDTKSPIHIWNPSVRKFRTLPMSTNVKFR---YIALQFGFHPGVNDYKV 176 Query: 184 VYIVKYGLWDKPLTTYSCVTCVYSLNTNSWRK 279 V +++ D + VYSL+T+SW+K Sbjct: 177 VRMLRVHKDD------AFAVEVYSLSTDSWKK 202 >emb|CAN90142.1| S haplotype-specific F-box protein [Prunus cerasifera] Length = 330 Score = 62.4 bits (150), Expect = 4e-08 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%) Frame = +1 Query: 4 SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183 SNGL+CI D IY+WNP ++K +T+P S ++ + + + A+ FGF P INDY Sbjct: 102 SNGLVCISDEILNFDSPIYIWNPSVRKFRTIPMSTNINIKFS-YDALQFGFHPRINDYKA 160 Query: 184 VYIVKYGLWDKPLTTYSCVTC-VYSLNTNSWR 276 V +++ T S + VYSL T+SW+ Sbjct: 161 VRMMR--------TNKSALAVEVYSLRTDSWK 184 >gb|AEX38307.1| S haplotype-specific F-box protein [Prunus armeniaca] Length = 223 Score = 62.0 bits (149), Expect = 5e-08 Identities = 34/91 (37%), Positives = 54/91 (59%) Frame = +1 Query: 4 SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183 SNGL+CI + T I++WNP ++K +TLP S ++ + + A+ FGF P +NDY V Sbjct: 98 SNGLVCISDDKLDTKSPIHIWNPSVRKFRTLPMSTNVKFR---YIALQFGFHPGVNDYKV 154 Query: 184 VYIVKYGLWDKPLTTYSCVTCVYSLNTNSWR 276 V +++ D + VYSL+T+SW+ Sbjct: 155 VRMLRVHKDD------AFAVEVYSLSTDSWK 179