BLASTX nr result

ID: Bupleurum21_contig00021369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021369
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ21663.1| F-box protein [Prunus avium]                            64   1e-08
gb|ABO34164.1| truncated F-box protein 1 [Prunus armeniaca]            64   1e-08
gb|ABE27176.1| F-box 1 [Prunus armeniaca]                              64   1e-08
emb|CAN90142.1| S haplotype-specific F-box protein [Prunus ceras...    62   4e-08
gb|AEX38307.1| S haplotype-specific F-box protein [Prunus armeni...    62   5e-08

>gb|AFJ21663.1| F-box protein [Prunus avium]
          Length = 380

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/91 (39%), Positives = 55/91 (60%)
 Frame = +1

Query: 4   SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183
           SNGL+CI  +T  T   I++WNP ++K +TLP S + P  +  + A+ FGF P +NDY V
Sbjct: 120 SNGLVCISDDTLDTKSPIHIWNPSVRKFRTLPMSTN-PNVKFRYIALQFGFHPGVNDYKV 178

Query: 184 VYIVKYGLWDKPLTTYSCVTCVYSLNTNSWR 276
           V +++    D      +    VYSL+T+SW+
Sbjct: 179 VRMLRVHKDD------AFAVEVYSLSTDSWK 203


>gb|ABO34164.1| truncated F-box protein 1 [Prunus armeniaca]
          Length = 181

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/92 (38%), Positives = 55/92 (59%)
 Frame = +1

Query: 4   SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183
           SNGL+CI  +   T   I++WNP ++K +TLP S ++ +    + A+ FGF P +NDY V
Sbjct: 98  SNGLVCISDDKLDTKSPIHIWNPSVRKFRTLPMSTNVKFR---YIALQFGFHPGVNDYKV 154

Query: 184 VYIVKYGLWDKPLTTYSCVTCVYSLNTNSWRK 279
           V +++    D      +    VYSL+T+SW+K
Sbjct: 155 VRMLRVHKDD------AFAVEVYSLSTDSWKK 180


>gb|ABE27176.1| F-box 1 [Prunus armeniaca]
          Length = 203

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/92 (38%), Positives = 55/92 (59%)
 Frame = +1

Query: 4   SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183
           SNGL+CI  +   T   I++WNP ++K +TLP S ++ +    + A+ FGF P +NDY V
Sbjct: 120 SNGLVCISDDKLDTKSPIHIWNPSVRKFRTLPMSTNVKFR---YIALQFGFHPGVNDYKV 176

Query: 184 VYIVKYGLWDKPLTTYSCVTCVYSLNTNSWRK 279
           V +++    D      +    VYSL+T+SW+K
Sbjct: 177 VRMLRVHKDD------AFAVEVYSLSTDSWKK 202


>emb|CAN90142.1| S haplotype-specific F-box protein [Prunus cerasifera]
          Length = 330

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = +1

Query: 4   SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183
           SNGL+CI       D  IY+WNP ++K +T+P S ++  + + + A+ FGF P INDY  
Sbjct: 102 SNGLVCISDEILNFDSPIYIWNPSVRKFRTIPMSTNINIKFS-YDALQFGFHPRINDYKA 160

Query: 184 VYIVKYGLWDKPLTTYSCVTC-VYSLNTNSWR 276
           V +++        T  S +   VYSL T+SW+
Sbjct: 161 VRMMR--------TNKSALAVEVYSLRTDSWK 184


>gb|AEX38307.1| S haplotype-specific F-box protein [Prunus armeniaca]
          Length = 223

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/91 (37%), Positives = 54/91 (59%)
 Frame = +1

Query: 4   SNGLICIFKNTHKTDHDIYLWNPVIQKHKTLPNSPHLPYERTLWKAIGFGFVPEINDYVV 183
           SNGL+CI  +   T   I++WNP ++K +TLP S ++ +    + A+ FGF P +NDY V
Sbjct: 98  SNGLVCISDDKLDTKSPIHIWNPSVRKFRTLPMSTNVKFR---YIALQFGFHPGVNDYKV 154

Query: 184 VYIVKYGLWDKPLTTYSCVTCVYSLNTNSWR 276
           V +++    D      +    VYSL+T+SW+
Sbjct: 155 VRMLRVHKDD------AFAVEVYSLSTDSWK 179


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