BLASTX nr result

ID: Bupleurum21_contig00021350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021350
         (1410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267...   176   2e-41
emb|CBI16241.3| unnamed protein product [Vitis vinifera]              176   2e-41
ref|XP_002314205.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-38
ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801...   154   4e-35
ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medi...   154   5e-35

>ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267264 [Vitis vinifera]
          Length = 1024

 Score =  176 bits (445), Expect = 2e-41
 Identities = 102/207 (49%), Positives = 133/207 (64%), Gaps = 3/207 (1%)
 Frame = -3

Query: 1114 THEKMIQPTFDIHSGSGYSLEHSSLSRETYLAPSTMNLDNVVDIEFTDPAILAVGKGRSP 935
            +HE+  Q  FD  SG+ + L+ SSL R  Y  PS  N+ +  DIEF DPAILAVGKGR P
Sbjct: 823  SHERTEQ-AFDAISGN-HLLDTSSLLRNPYQTPSG-NIASAGDIEFIDPAILAVGKGRLP 879

Query: 934  GGLNS--LDMWSGSPQQTYAYDNEARIESMLQRSRTSHKNQNQRYAEMRGSFSSHPDYYG 761
            GGLN+  LDM S    Q  A++NEAR++ ++QRS + H  QN R+A++   FS   D YG
Sbjct: 880  GGLNNPALDMRSNFHPQLSAFENEARLQLLMQRSLSPH--QNLRFADIGEGFSPLGDAYG 937

Query: 760  IPPSRMEQIVAKNVSPFLPSSRVQHRNQQI-NSYWDDWNEVQVGNELNMAELLNTKRFGI 584
            IP   MEQ  A N+SPF   S  Q RN  + N +WD WNE+Q GN+LNMAELL  +R G 
Sbjct: 938  IPSRLMEQSQASNISPFAQLSLQQSRNAIMSNGHWDGWNEIQSGNDLNMAELLRNERLGY 997

Query: 583  SELFNSHEDPKYRMSGSNDMYNHAYGI 503
            ++ +  +ED K+RM  S D+YN  +GI
Sbjct: 998  NKFYTGYEDSKFRMPPSGDLYNRTFGI 1024


>emb|CBI16241.3| unnamed protein product [Vitis vinifera]
          Length = 1022

 Score =  176 bits (445), Expect = 2e-41
 Identities = 102/207 (49%), Positives = 133/207 (64%), Gaps = 3/207 (1%)
 Frame = -3

Query: 1114 THEKMIQPTFDIHSGSGYSLEHSSLSRETYLAPSTMNLDNVVDIEFTDPAILAVGKGRSP 935
            +HE+  Q  FD  SG+ + L+ SSL R  Y  PS  N+ +  DIEF DPAILAVGKGR P
Sbjct: 821  SHERTEQ-AFDAISGN-HLLDTSSLLRNPYQTPSG-NIASAGDIEFIDPAILAVGKGRLP 877

Query: 934  GGLNS--LDMWSGSPQQTYAYDNEARIESMLQRSRTSHKNQNQRYAEMRGSFSSHPDYYG 761
            GGLN+  LDM S    Q  A++NEAR++ ++QRS + H  QN R+A++   FS   D YG
Sbjct: 878  GGLNNPALDMRSNFHPQLSAFENEARLQLLMQRSLSPH--QNLRFADIGEGFSPLGDAYG 935

Query: 760  IPPSRMEQIVAKNVSPFLPSSRVQHRNQQI-NSYWDDWNEVQVGNELNMAELLNTKRFGI 584
            IP   MEQ  A N+SPF   S  Q RN  + N +WD WNE+Q GN+LNMAELL  +R G 
Sbjct: 936  IPSRLMEQSQASNISPFAQLSLQQSRNAIMSNGHWDGWNEIQSGNDLNMAELLRNERLGY 995

Query: 583  SELFNSHEDPKYRMSGSNDMYNHAYGI 503
            ++ +  +ED K+RM  S D+YN  +GI
Sbjct: 996  NKFYTGYEDSKFRMPPSGDLYNRTFGI 1022


>ref|XP_002314205.1| predicted protein [Populus trichocarpa] gi|222850613|gb|EEE88160.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  164 bits (414), Expect = 7e-38
 Identities = 96/206 (46%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
 Frame = -3

Query: 1114 THEKMIQPTFDIHSGSGYSLEHSSLSRETYLAPSTMNLDNVVDIEFTDPAILAVGKGRSP 935
            +HE+M Q +FDI SG+ + L+ SS  R ++ +P T N  +  +IEF DPAILAVGKGR  
Sbjct: 175  SHERMEQ-SFDIISGN-HLLDSSSFLRNSFQSPPTGNAGSAGEIEFMDPAILAVGKGRLQ 232

Query: 934  GGLNSL--DMWSGSPQQTYAYDNEARIESMLQRSRTSHKNQNQRYAEMRGSFSSHPDYYG 761
            GGLN+L  DM S  PQQ + +DNEAR++ ++QRS   H  QN RYA+   SFSS  D +G
Sbjct: 233  GGLNNLGVDMRSNFPQQLHHFDNEARLQLLMQRSLPPH--QNTRYADTGDSFSSLNDSFG 290

Query: 760  IPPSRMEQIVAKNVSPFLPSSRVQHRNQQI-NSYWDDWNEVQVGNELNMAELLNTKRFGI 584
            I    ++Q     +SP+   S  Q RN  + N  WD WNEVQ GN L M ELL  +R G 
Sbjct: 291  ISSRLVDQSQISGLSPYAQLSLQQSRNGLVPNGRWDGWNEVQGGNSLRMTELLRNERVGF 350

Query: 583  SELFNS-HEDPKYRMSGSNDMYNHAY 509
            ++ + S +ED K+RM  S+D+YN  +
Sbjct: 351  NKFYTSGYEDSKFRMPSSDDLYNRTF 376


>ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max]
          Length = 1022

 Score =  154 bits (390), Expect = 4e-35
 Identities = 89/207 (42%), Positives = 126/207 (60%), Gaps = 3/207 (1%)
 Frame = -3

Query: 1114 THEKMIQPTFDIHSGSGYSLEHSSLSRETYLAPSTMNLDNVVDIEFTDPAILAVGKGRSP 935
            +HE+ ++  FD  SG+   L+HSSL R +Y  PS  NL +  DIEF DPAILAVGKGR  
Sbjct: 821  SHER-VEQAFDSISGNSL-LDHSSLLRNSYQTPSAGNLGSAGDIEFMDPAILAVGKGRLQ 878

Query: 934  GGLNS--LDMWSGSPQQTYAYDNEARIESMLQRSRTSHKNQNQRYAEMRGSFSSHPDYYG 761
            G LNS  LD+ S    Q   ++N+AR++ ++QRS      QN R++E+  +FS   D Y 
Sbjct: 879  GALNSPALDIRSNFMPQLNYFENDARLQLLMQRSLAPQ--QNLRFSEIGNTFSQLGDSYA 936

Query: 760  IPPSRMEQIVAKNVSPFLPSSRVQHRNQQI-NSYWDDWNEVQVGNELNMAELLNTKRFGI 584
            +  SR++Q    N+ PF   S  Q  N  + N  WD WNEVQ GN L +AELL  +R G 
Sbjct: 937  VS-SRLDQSQVSNLGPFQQLSLQQSTNAVLSNGQWDGWNEVQSGNGLGVAELLRNERLGF 995

Query: 583  SELFNSHEDPKYRMSGSNDMYNHAYGI 503
            ++ ++ ++D K+RM  S D+YN  +G+
Sbjct: 996  NKFYSGYDDSKFRMPNSGDLYNRTFGM 1022


>ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355486188|gb|AES67391.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 1007

 Score =  154 bits (389), Expect = 5e-35
 Identities = 96/208 (46%), Positives = 127/208 (61%), Gaps = 4/208 (1%)
 Frame = -3

Query: 1114 THEKMIQPTFDIHSGSGYSLEHSSLSRETYLAPSTMNLDNVVDIEFTDPAILAVGKGRSP 935
            +HE+M Q  FD  SG+   L+ S L R +Y  PST N     DIEF DPAILAVGKGR  
Sbjct: 806  SHERMGQ-AFDSTSGNSL-LDPSFLWRNSYQTPSTGNFGGAGDIEFMDPAILAVGKGRLQ 863

Query: 934  GGLNS--LDMWSG-SPQQTYAYDNEARIESMLQRSRTSHKNQNQRYAEMRGSFSSHPDYY 764
            G LNS  LDM S  SPQ  Y ++NEAR++ ++QRS +    QN R++E+  +FS   D Y
Sbjct: 864  GSLNSPMLDMQSNYSPQLNY-FENEARLQLLMQRSLSPQ--QNHRFSEIGNTFSHLGDSY 920

Query: 763  GIPPSRMEQIVAKNVSPFLPSSRVQHRNQQI-NSYWDDWNEVQVGNELNMAELLNTKRFG 587
            GI  SR++Q    N++ F   +  Q RN  + N  WD WNE+Q GN + MAELL  +R G
Sbjct: 921  GIS-SRIDQSQVSNLASFPQLALQQSRNAVLSNGNWDGWNEMQNGNSMGMAELLRNERLG 979

Query: 586  ISELFNSHEDPKYRMSGSNDMYNHAYGI 503
             S+    ++D KY+M  S D+YN  +GI
Sbjct: 980  FSKFHRGYDDSKYQMPNSGDLYNRTFGI 1007


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