BLASTX nr result

ID: Bupleurum21_contig00021333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021333
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278693.1| PREDICTED: uncharacterized protein LOC100257...    69   3e-10
emb|CBI29609.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002517124.1| hypothetical protein RCOM_0911910 [Ricinus c...    67   2e-09
ref|NP_188891.1| uncharacterized protein [Arabidopsis thaliana] ...    64   1e-08
ref|XP_002868246.1| hypothetical protein ARALYDRAFT_493410 [Arab...    64   2e-08

>ref|XP_002278693.1| PREDICTED: uncharacterized protein LOC100257987 [Vitis vinifera]
          Length = 492

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/116 (37%), Positives = 68/116 (58%)
 Frame = +1

Query: 34  QSEMVSDDSDMLIDSEDNPPSDYLPNSSDLASVIHQSTAPREEMAEARKKLSLLLATDNP 213
           + +++ +D D  +DS D+  +  LP +           A  +E+AEAR KLS LLA D  
Sbjct: 251 EDKVIPEDFDNFVDSLDDMLAQPLPEAPLSPPATDNYQAFEDEIAEARIKLSSLLAMDFH 310

Query: 214 VLLSSNKLAEILSLTKLLKTDINLNANQHAILKLIDEIPLACKELQENEKTAEEAD 381
           +L+SS  L E++ L+  L+ D +LNA+Q + LKLI+EIP+  K+  E  +  EE +
Sbjct: 311 LLVSSKDLKELVLLSSKLQKDPSLNADQLSKLKLIEEIPVTGKDYLETMQIIEEVN 366


>emb|CBI29609.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/116 (37%), Positives = 66/116 (56%)
 Frame = +1

Query: 34  QSEMVSDDSDMLIDSEDNPPSDYLPNSSDLASVIHQSTAPREEMAEARKKLSLLLATDNP 213
           +  M+ +D D  +DS D+  +  LP +    S      A  +E+AEAR KLS LLA D  
Sbjct: 260 EDNMIPEDFDNFVDSLDDMLAQPLPEALLSPSATDNYQASEDEIAEARIKLSSLLAMDFH 319

Query: 214 VLLSSNKLAEILSLTKLLKTDINLNANQHAILKLIDEIPLACKELQENEKTAEEAD 381
           +L+SS  L E+  L+  L+ D +L+A+Q + LKLI+EIP+  K   E  +  EE +
Sbjct: 320 LLVSSKDLKELALLSSKLQKDPSLDADQLSKLKLIEEIPVTGKVFLEAMQIKEEVN 375


>ref|XP_002517124.1| hypothetical protein RCOM_0911910 [Ricinus communis]
           gi|223543759|gb|EEF45287.1| hypothetical protein
           RCOM_0911910 [Ricinus communis]
          Length = 533

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/119 (36%), Positives = 65/119 (54%)
 Frame = +1

Query: 25  EEHQSEMVSDDSDMLIDSEDNPPSDYLPNSSDLASVIHQSTAPREEMAEARKKLSLLLAT 204
           EE   E + +D D  + S ++  +  L  ++  +S    S A + EMAEAR KLS LL  
Sbjct: 289 EEPIIEPIPEDFDNYLSSLEDILTQPLAMTTIPSSTTADSAATQIEMAEARNKLSSLLVM 348

Query: 205 DNPVLLSSNKLAEILSLTKLLKTDINLNANQHAILKLIDEIPLACKELQENEKTAEEAD 381
           D P L+SS  + E+ +L   L+TD  +NA Q   LKLI+EIP   +   E+ +  ++ D
Sbjct: 349 DFPSLVSSKCITELTTLASKLRTDPTMNAEQLVKLKLIEEIPTFSEVYLESRELIDQVD 407


>ref|NP_188891.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11994284|dbj|BAB01467.1| unnamed protein product
           [Arabidopsis thaliana] gi|17381094|gb|AAL36359.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259295|gb|AAM14383.1| unknown protein [Arabidopsis
           thaliana] gi|332643128|gb|AEE76649.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 600

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
 Frame = +1

Query: 52  DDSDMLIDSEDN----PPSDYLPNSSDLASVIHQSTAPRE-EMAEARKKLSLLLATDNPV 216
           ++ D  ++S DN    PP +   +SS L SV   S+  RE E AEAR K+S LL  D   
Sbjct: 363 EEFDSYLNSLDNLMQQPPEEVGRDSSVLVSV---SSPMREYEWAEARMKISSLLEKDFTT 419

Query: 217 LLSSNKLAEILSLTKLLKTDINLNANQHAILKLIDEIPLACKELQENEKTAEEAD 381
           L  S   AEI +L   L+ D NL A +   LKL++EIP   +  QEN+   EEAD
Sbjct: 420 LFLSKDAAEIAALATKLRKDPNLTAEEIVRLKLMEEIPTFSEVFQENKGVIEEAD 474


>ref|XP_002868246.1| hypothetical protein ARALYDRAFT_493410 [Arabidopsis lyrata subsp.
           lyrata] gi|297314082|gb|EFH44505.1| hypothetical protein
           ARALYDRAFT_493410 [Arabidopsis lyrata subsp. lyrata]
          Length = 554

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
 Frame = +1

Query: 52  DDSDMLIDSEDN----PPSDYLPNSSDLASVIHQSTAPREEMAEARKKLSLLLATDNPVL 219
           ++ D  ++S +N     PS+    SS    V   S     E AEAR KLS LL  D   L
Sbjct: 315 EEFDSYLNSLENLLQEQPSEAGQESSSSLPVSASSPMREHEWAEARTKLSSLLEKDFSSL 374

Query: 220 LSSNKLAEILSLTKLLKTDINLNANQHAILKLIDEIPLACKELQENEKTAEEAD 381
             SN+  E+ SL   L+ D +L+A +   LKLI+EIP   +  QEN+   EEAD
Sbjct: 375 FMSNEATEMASLAAKLRLDPSLSAEEIVRLKLIEEIPTFSEVFQENKSVIEEAD 428


Top