BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021330
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   126   2e-27
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   125   4e-27
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   124   8e-27
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   122   3e-26
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   122   4e-26

>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +2

Query: 2    GPITPSRGLRQGDPLSPYLFLICVEGFSSLIKKYERQQLIKGCRIARGAPSVSHMLFADD 181
            GPI P+RGLRQGD LSPYLF++  EG S+L+K+ ER  ++ GC +ARGAP VSH+ FAD+
Sbjct: 1180 GPIYPTRGLRQGDXLSPYLFILAAEGLSALLKQGERCGVLHGCSVARGAPXVSHLFFADB 1239

Query: 182  SYLFVPATTTAAGKVLDILHSFENASGQVINFNKSSVFFSRNTDAVTREQV 334
            SYLF  AT + +  +  IL  ++N SGQ IN NK ++ FSRNTD V +  +
Sbjct: 1240 SYLFFKATESESRSLKQILLRYQNLSGQEINLNKXALTFSRNTDDVVKRGI 1290


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/111 (54%), Positives = 77/111 (69%)
 Frame = +2

Query: 2    GPITPSRGLRQGDPLSPYLFLICVEGFSSLIKKYERQQLIKGCRIARGAPSVSHMLFADD 181
            GPI P RGLRQGDPLSPYLF+IC EG SSLI++ E    I G +I + AP +SH+LFADD
Sbjct: 1049 GPIIPGRGLRQGDPLSPYLFIICAEGLSSLIRQAEGSGTISGAKICKNAPIISHLLFADD 1108

Query: 182  SYLFVPATTTAAGKVLDILHSFENASGQVINFNKSSVFFSRNTDAVTREQV 334
             +LF  A +  A  + +IL  +E++SGQ INF KS VF+SRN D   +  +
Sbjct: 1109 CFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASI 1159


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/102 (55%), Positives = 75/102 (73%)
 Frame = +2

Query: 2   GPITPSRGLRQGDPLSPYLFLICVEGFSSLIKKYERQQLIKGCRIARGAPSVSHMLFADD 181
           GPI P RGLRQGDPLSPYLF++C EG S+LIK+ ER  ++ G ++ + AP+VSH+LFADD
Sbjct: 217 GPIYPGRGLRQGDPLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADD 276

Query: 182 SYLFVPATTTAAGKVLDILHSFENASGQVINFNKSSVFFSRN 307
           S+LF  A       + DIL ++ NAS Q+IN  KS ++FSRN
Sbjct: 277 SFLFFRANENETRALKDILDTYANASDQLINMQKSEIYFSRN 318


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/111 (54%), Positives = 77/111 (69%)
 Frame = +2

Query: 2   GPITPSRGLRQGDPLSPYLFLICVEGFSSLIKKYERQQLIKGCRIARGAPSVSHMLFADD 181
           GPI P RGLRQGDPLSPYLF++ VEG S+LI K   +  I G ++ RGAP VSH+LFAD+
Sbjct: 13  GPIVPGRGLRQGDPLSPYLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFADN 72

Query: 182 SYLFVPATTTAAGKVLDILHSFENASGQVINFNKSSVFFSRNTDAVTREQV 334
            +LF  A    A ++L IL ++E ASGQ IN +KS VFFSRN     +E +
Sbjct: 73  CFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDL 123


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/109 (57%), Positives = 78/109 (71%)
 Frame = +2

Query: 2    GPITPSRGLRQGDPLSPYLFLICVEGFSSLIKKYERQQLIKGCRIARGAPSVSHMLFADD 181
            G I PSRGLRQGDP+SPYLFLI  EG S+LI+K ER+Q I G  IARGAPSVSH+ +ADD
Sbjct: 913  GKIKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADD 972

Query: 182  SYLFVPATTTAAGKVLDILHSFENASGQVINFNKSSVFFSRNTDAVTRE 328
            S LF  AT T    + +I  ++E ASGQ IN +KS++ FS  + A  +E
Sbjct: 973  SLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICFSPKSPAAIKE 1021