BLASTX nr result

ID: Bupleurum21_contig00021326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021326
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550684.1| PREDICTED: transmembrane 9 superfamily membe...   113   2e-23
ref|XP_003518221.1| PREDICTED: transmembrane 9 superfamily membe...   113   2e-23
emb|CBI36530.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002278700.1| PREDICTED: transmembrane 9 superfamily membe...   111   5e-23
ref|XP_003527177.1| PREDICTED: transmembrane 9 superfamily membe...   111   7e-23

>ref|XP_003550684.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 642

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/83 (67%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
 Frame = -2

Query: 247 PMAKDQTTTLCHCLWILMCFLLIV-QGYAFYLPGVAPEDFEKGDPLNVKVNKLTSTKTQL 71
           P+A+D       C+ + +C LLI  Q   FYLPGVAPEDF KGDPL VKVNKLTSTKTQL
Sbjct: 5   PLARDL------CISVFICILLITHQSTCFYLPGVAPEDFWKGDPLRVKVNKLTSTKTQL 58

Query: 70  PYSYYTLPFCQPKNIVDSAENLG 2
           PYSYY+LP+C+PK+I DSAENLG
Sbjct: 59  PYSYYSLPYCRPKHIFDSAENLG 81


>ref|XP_003518221.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 642

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/82 (68%), Positives = 66/82 (80%)
 Frame = -2

Query: 247 PMAKDQTTTLCHCLWILMCFLLIVQGYAFYLPGVAPEDFEKGDPLNVKVNKLTSTKTQLP 68
           P+A+D    +C C++IL   L+  Q   FYLPGVAPEDF KGDPL VKVNKLTSTKTQLP
Sbjct: 5   PLARD--LCICVCIYIL---LIAHQSTCFYLPGVAPEDFWKGDPLKVKVNKLTSTKTQLP 59

Query: 67  YSYYTLPFCQPKNIVDSAENLG 2
           YSYY+LP+C+PK+I DSAENLG
Sbjct: 60  YSYYSLPYCRPKHIFDSAENLG 81


>emb|CBI36530.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/69 (73%), Positives = 58/69 (84%)
 Frame = -2

Query: 208 LWILMCFLLIVQGYAFYLPGVAPEDFEKGDPLNVKVNKLTSTKTQLPYSYYTLPFCQPKN 29
           LWI +  LL     +FYLPGVAP+DF KGDPL VKVNKLTSTKTQLPYSYY+LP+C+P+ 
Sbjct: 18  LWIFLSLLLFPHVRSFYLPGVAPQDFNKGDPLKVKVNKLTSTKTQLPYSYYSLPYCRPET 77

Query: 28  IVDSAENLG 2
           IVDSAENLG
Sbjct: 78  IVDSAENLG 86


>ref|XP_002278700.1| PREDICTED: transmembrane 9 superfamily member 4 isoform 1 [Vitis
           vinifera]
          Length = 646

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/69 (73%), Positives = 58/69 (84%)
 Frame = -2

Query: 208 LWILMCFLLIVQGYAFYLPGVAPEDFEKGDPLNVKVNKLTSTKTQLPYSYYTLPFCQPKN 29
           LWI +  LL     +FYLPGVAP+DF KGDPL VKVNKLTSTKTQLPYSYY+LP+C+P+ 
Sbjct: 18  LWIFLSLLLFPHVRSFYLPGVAPQDFNKGDPLKVKVNKLTSTKTQLPYSYYSLPYCRPET 77

Query: 28  IVDSAENLG 2
           IVDSAENLG
Sbjct: 78  IVDSAENLG 86


>ref|XP_003527177.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 644

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/73 (73%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
 Frame = -2

Query: 211 CLWILMCFLLIVQ---GYAFYLPGVAPEDFEKGDPLNVKVNKLTSTKTQLPYSYYTLPFC 41
           CLWI + FLL+V    G +FYLPGVAPEDF KGD L VKVNKL+STKTQLPYSYY+LP+C
Sbjct: 12  CLWIHVYFLLLVHLHVGTSFYLPGVAPEDFHKGDLLRVKVNKLSSTKTQLPYSYYSLPYC 71

Query: 40  QPKNIVDSAENLG 2
            P +IVDSAENLG
Sbjct: 72  HPGHIVDSAENLG 84


Top