BLASTX nr result

ID: Bupleurum21_contig00021318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021318
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523341.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   258   5e-67
ref|XP_002523339.1| Ubiquitin ligase SINAT3, putative [Ricinus c...   258   5e-67
ref|XP_002302632.1| predicted protein [Populus trichocarpa] gi|1...   258   5e-67
ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-66
ref|XP_003602251.1| Ubiquitin ligase SINAT3 [Medicago truncatula...   256   2e-66

>ref|XP_002523341.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223537429|gb|EEF39057.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 326

 Score =  258 bits (658), Expect = 5e-67
 Identities = 119/121 (98%), Positives = 120/121 (99%)
 Frame = +3

Query: 3   LRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 182
           LRDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM
Sbjct: 172 LRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 231

Query: 183 AFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF 362
           AFLRFMGDE DARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF
Sbjct: 232 AFLRFMGDETDARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF 291

Query: 363 F 365
           F
Sbjct: 292 F 292


>ref|XP_002523339.1| Ubiquitin ligase SINAT3, putative [Ricinus communis]
           gi|223537427|gb|EEF39055.1| Ubiquitin ligase SINAT3,
           putative [Ricinus communis]
          Length = 326

 Score =  258 bits (658), Expect = 5e-67
 Identities = 119/121 (98%), Positives = 120/121 (99%)
 Frame = +3

Query: 3   LRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 182
           LRDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM
Sbjct: 172 LRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 231

Query: 183 AFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF 362
           AFLRFMGDE DARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF
Sbjct: 232 AFLRFMGDETDARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF 291

Query: 363 F 365
           F
Sbjct: 292 F 292


>ref|XP_002302632.1| predicted protein [Populus trichocarpa] gi|118486216|gb|ABK94950.1|
           unknown [Populus trichocarpa]
           gi|222844358|gb|EEE81905.1| predicted protein [Populus
           trichocarpa]
          Length = 330

 Score =  258 bits (658), Expect = 5e-67
 Identities = 119/121 (98%), Positives = 121/121 (100%)
 Frame = +3

Query: 3   LRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 182
           LRDDHKVDMH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM
Sbjct: 176 LRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 235

Query: 183 AFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF 362
           AFLRFMGDEA+ARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF
Sbjct: 236 AFLRFMGDEAEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF 295

Query: 363 F 365
           F
Sbjct: 296 F 296


>ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|222859096|gb|EEE96643.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  256 bits (655), Expect = 1e-66
 Identities = 118/121 (97%), Positives = 120/121 (99%)
 Frame = +3

Query: 3   LRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 182
           LRDDHKVDMH GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM
Sbjct: 178 LRDDHKVDMHIGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 237

Query: 183 AFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF 362
           AFLRFMGDEA+ARNYSYSLEVGGNGRKLIWEGTPRS+RDSHRKVRDSHDGLIIQRNMALF
Sbjct: 238 AFLRFMGDEAEARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALF 297

Query: 363 F 365
           F
Sbjct: 298 F 298


>ref|XP_003602251.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|158516798|gb|ABW70162.1| SINA4 [Medicago truncatula]
           gi|355491299|gb|AES72502.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 324

 Score =  256 bits (653), Expect = 2e-66
 Identities = 118/121 (97%), Positives = 119/121 (98%)
 Frame = +3

Query: 3   LRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 182
           LRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM
Sbjct: 171 LRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 230

Query: 183 AFLRFMGDEADARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALF 362
           AFLRFMGDE DARNYSYSLEVG NGRKLIWEGTPRS+RDSHRKVRDSHDGLIIQRNMALF
Sbjct: 231 AFLRFMGDENDARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALF 290

Query: 363 F 365
           F
Sbjct: 291 F 291


Top