BLASTX nr result

ID: Bupleurum21_contig00021311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021311
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517663.1| signal recognition particle 54 kD protein, p...   660   0.0  
ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kD...   659   0.0  
ref|XP_003531722.1| PREDICTED: signal recognition particle 54 kD...   659   0.0  
emb|CBI36349.3| unnamed protein product [Vitis vinifera]              659   0.0  
ref|XP_002322968.1| predicted protein [Populus trichocarpa] gi|2...   659   0.0  

>ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
            communis] gi|223543295|gb|EEF44827.1| signal recognition
            particle 54 kD protein, putative [Ricinus communis]
          Length = 497

 Score =  660 bits (1704), Expect = 0.0
 Identities = 333/369 (90%), Positives = 345/369 (93%)
 Frame = -3

Query: 1108 LGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL 929
            LGGSISRA+QQMSNATIIDEK LN+CLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL
Sbjct: 6    LGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL 65

Query: 928  AAGHNKRKIIQQAIFNELCKILDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTKYAFYH 749
            AAGHNKRKIIQQAIFNELCK+LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YH
Sbjct: 66   AAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYH 125

Query: 748  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD 569
            QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD
Sbjct: 126  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD 185

Query: 568  LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXQSVAVGAV 389
            LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG           QSVAVGAV
Sbjct: 186  LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAV 245

Query: 388  IITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 209
            I+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD
Sbjct: 246  IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305

Query: 208  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEMIQYMLNIGPMDQVFSMVPGLSTKFMSEGS 29
            KIHEVVPMDQQPELLQKLSEGNFTLRIMYE  Q +L +GP+ QVFSM+PG S + M +G 
Sbjct: 306  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAELMPKGR 365

Query: 28   EKERQAKMK 2
            EKE QAK+K
Sbjct: 366  EKESQAKIK 374


>ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kDa protein 2-like [Cucumis
            sativus]
          Length = 495

 Score =  659 bits (1699), Expect = 0.0
 Identities = 331/369 (89%), Positives = 346/369 (93%)
 Frame = -3

Query: 1108 LGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL 929
            LGGSISRALQQMS+AT+IDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL
Sbjct: 6    LGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL 65

Query: 928  AAGHNKRKIIQQAIFNELCKILDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTKYAFYH 749
            AAGHNKRKIIQQA+FNELCK+LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YH
Sbjct: 66   AAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYH 125

Query: 748  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD 569
            QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKE+CD
Sbjct: 126  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKESCD 185

Query: 568  LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXQSVAVGAV 389
            LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG           QSVAVGAV
Sbjct: 186  LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAV 245

Query: 388  IITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 209
            I+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD
Sbjct: 246  IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305

Query: 208  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEMIQYMLNIGPMDQVFSMVPGLSTKFMSEGS 29
            KIHEVVPMDQQPELLQKLSEGNFTLRIMY+  Q +L +GP++QVFSM+PG S   M +G 
Sbjct: 306  KIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADLMPKGR 365

Query: 28   EKERQAKMK 2
            EKE QAK+K
Sbjct: 366  EKESQAKLK 374


>ref|XP_003531722.1| PREDICTED: signal recognition particle 54 kDa protein 2-like isoform
            1 [Glycine max]
          Length = 495

 Score =  659 bits (1699), Expect = 0.0
 Identities = 332/369 (89%), Positives = 345/369 (93%)
 Frame = -3

Query: 1108 LGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL 929
            LGGSISRALQQMSNATIIDEKVLN+CLN+ITRALLQSDVQFKLVRDMQTNIK IVNLDDL
Sbjct: 6    LGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKSIVNLDDL 65

Query: 928  AAGHNKRKIIQQAIFNELCKILDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTKYAFYH 749
            AAGHNKR+IIQQA+FNELCKILDPGKPSFT KKGKPSVVMFVGLQGSGKTTTCTKYAFYH
Sbjct: 66   AAGHNKRRIIQQAVFNELCKILDPGKPSFTLKKGKPSVVMFVGLQGSGKTTTCTKYAFYH 125

Query: 748  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD 569
            QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK+ENCD
Sbjct: 126  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKQENCD 185

Query: 568  LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXQSVAVGAV 389
            LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG           QSVAVGAV
Sbjct: 186  LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAV 245

Query: 388  IITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 209
            I+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD
Sbjct: 246  IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305

Query: 208  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEMIQYMLNIGPMDQVFSMVPGLSTKFMSEGS 29
            KIHEVVPMDQQPELLQKLSEGNFTLRIMYE  Q +L +GP+ QVFSM+PG S + M +G 
Sbjct: 306  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQVFSMLPGFSAELMPKGR 365

Query: 28   EKERQAKMK 2
            EKE QAK+K
Sbjct: 366  EKESQAKIK 374


>emb|CBI36349.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  659 bits (1699), Expect = 0.0
 Identities = 333/369 (90%), Positives = 344/369 (93%)
 Frame = -3

Query: 1108 LGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL 929
            LGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKK+VN DDL
Sbjct: 6    LGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLVNFDDL 65

Query: 928  AAGHNKRKIIQQAIFNELCKILDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTKYAFYH 749
            AAGHNKRKIIQQAIF ELCK+LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YH
Sbjct: 66   AAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYH 125

Query: 748  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD 569
            QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD
Sbjct: 126  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD 185

Query: 568  LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXQSVAVGAV 389
            LIIVDTSGRHKQEAALFEEMRQVSEAT+PDLVIFVMDSSIG           QSVAVGAV
Sbjct: 186  LIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAAFDQAQAFRQSVAVGAV 245

Query: 388  IITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 209
            IITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD
Sbjct: 246  IITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305

Query: 208  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEMIQYMLNIGPMDQVFSMVPGLSTKFMSEGS 29
            KIHEVVPMDQQPELLQKLSEGNFTLRIMYE  Q +L +GP+ QVFSM+PG S + M +G 
Sbjct: 306  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAELMPKGR 365

Query: 28   EKERQAKMK 2
            EKE QAK+K
Sbjct: 366  EKESQAKIK 374


>ref|XP_002322968.1| predicted protein [Populus trichocarpa] gi|222867598|gb|EEF04729.1|
            predicted protein [Populus trichocarpa]
          Length = 491

 Score =  659 bits (1699), Expect = 0.0
 Identities = 331/369 (89%), Positives = 345/369 (93%)
 Frame = -3

Query: 1108 LGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL 929
            LGGSISRA+QQMSNATIIDEK LN+CLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL
Sbjct: 6    LGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDL 65

Query: 928  AAGHNKRKIIQQAIFNELCKILDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTKYAFYH 749
            AAGHNKRKIIQQAIFNELCK+LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YH
Sbjct: 66   AAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYH 125

Query: 748  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD 569
            QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD
Sbjct: 126  QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCD 185

Query: 568  LIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXQSVAVGAV 389
            LIIVDTSGRHKQE ALFEEMRQV+EATKPDLVIFVMDSSIG           QSVAVGAV
Sbjct: 186  LIIVDTSGRHKQEVALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAV 245

Query: 388  IITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 209
            I+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD
Sbjct: 246  IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 305

Query: 208  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEMIQYMLNIGPMDQVFSMVPGLSTKFMSEGS 29
            KIHEVVPMDQQPELLQKLSEGNFTLRIMYE  Q +L +GP+ QVFSM+PG S++ M +G 
Sbjct: 306  KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSSELMPKGR 365

Query: 28   EKERQAKMK 2
            EKE QAK+K
Sbjct: 366  EKESQAKIK 374


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