BLASTX nr result

ID: Bupleurum21_contig00021308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021308
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529941.1| PREDICTED: BUD13 homolog [Glycine max]             79   4e-13
ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera] gi...    77   1e-12
ref|XP_004156761.1| PREDICTED: BUD13 homolog [Cucumis sativus]         69   4e-10
ref|XP_004151912.1| PREDICTED: LOW QUALITY PROTEIN: BUD13 homolo...    69   4e-10
ref|XP_002890953.1| predicted protein [Arabidopsis lyrata subsp....    69   4e-10

>ref|XP_003529941.1| PREDICTED: BUD13 homolog [Glycine max]
          Length = 568

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/60 (58%), Positives = 49/60 (81%)
 Frame = +1

Query: 4   DEQKPQVEEDIDVKRIKRLEAIKARRPFGLISDDGSGWVPVSHAPQKLIDSSSDISPPRK 183
           DE+KP ++EDI+VKR+KRLE ++ARRP+  IS+DGSGWV +S   +  I+S +D+SPPRK
Sbjct: 65  DEEKPLIDEDIEVKRMKRLEQVRARRPYHAISEDGSGWVSLSSNSENPINSINDMSPPRK 124


>ref|XP_002278878.1| PREDICTED: BUD13 homolog [Vitis vinifera]
           gi|297742135|emb|CBI33922.3| unnamed protein product
           [Vitis vinifera]
          Length = 480

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/62 (54%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
 Frame = +1

Query: 4   DEQKPQVEEDIDVKRIKRLEAIKARRPFGLISDDGSGWVPVSHAP--QKLIDSSSDISPP 177
           DE+KPQ++EDI+VKR+KRLE ++++RP+  +S+DGSGWV +S AP      D +SD+SPP
Sbjct: 63  DEEKPQIDEDIEVKRMKRLEQLRSKRPYHALSEDGSGWVSISAAPTHSDSGDQNSDVSPP 122

Query: 178 RK 183
           R+
Sbjct: 123 RR 124


>ref|XP_004156761.1| PREDICTED: BUD13 homolog [Cucumis sativus]
          Length = 556

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/59 (50%), Positives = 46/59 (77%)
 Frame = +1

Query: 7   EQKPQVEEDIDVKRIKRLEAIKARRPFGLISDDGSGWVPVSHAPQKLIDSSSDISPPRK 183
           +++PQV+ED++VKR++RLE +KA+RP+  IS+DGSGWV +S         +SD+SPPR+
Sbjct: 68  DEEPQVDEDVEVKRMRRLEELKAKRPYNSISEDGSGWVSLSPNRANSSMVNSDMSPPRR 126


>ref|XP_004151912.1| PREDICTED: LOW QUALITY PROTEIN: BUD13 homolog [Cucumis sativus]
          Length = 527

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/59 (50%), Positives = 46/59 (77%)
 Frame = +1

Query: 7   EQKPQVEEDIDVKRIKRLEAIKARRPFGLISDDGSGWVPVSHAPQKLIDSSSDISPPRK 183
           +++PQV+ED++VKR++RLE +KA+RP+  IS+DGSGWV +S         +SD+SPPR+
Sbjct: 68  DEEPQVDEDVEVKRMRRLEELKAKRPYNSISEDGSGWVSLSPNRANSSMVNSDMSPPRR 126


>ref|XP_002890953.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336795|gb|EFH67212.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/59 (57%), Positives = 44/59 (74%)
 Frame = +1

Query: 7   EQKPQVEEDIDVKRIKRLEAIKARRPFGLISDDGSGWVPVSHAPQKLIDSSSDISPPRK 183
           E++P V+EDIDVKR++RLE IKARR    I++DGSGWV +   P    D+ SDISPPR+
Sbjct: 69  EERPLVDEDIDVKRMRRLEEIKARRAHNAIAEDGSGWVTL---PLNREDTQSDISPPRR 124


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