BLASTX nr result

ID: Bupleurum21_contig00021306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021306
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310332.1| predicted protein [Populus trichocarpa] gi|2...    72   7e-11
ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267...    69   5e-10
ref|XP_002525295.1| conserved hypothetical protein [Ricinus comm...    69   8e-10
ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08
ref|XP_002320023.1| predicted protein [Populus trichocarpa] gi|2...    62   9e-08

>ref|XP_002310332.1| predicted protein [Populus trichocarpa] gi|222853235|gb|EEE90782.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
 Frame = +3

Query: 9   ESKVLVKRCMKTPIRALTKVRDFYVQSMNNLANG---MSNVGPEKTXXXXXXXXXXXXXX 179
           ESK+  KR +K P++ LT  RDFY++ M   ++    MSN                    
Sbjct: 10  ESKL--KRILKVPLKILTSARDFYMKGMTEYSDQVYVMSNP-TGNLNNMPRSYSVSSSKS 66

Query: 180 XXXXXDFRELLRVASTKTL---SRHEDRNTDQQEFVRQQKSVSEGMKVVPRSQSVAIGRI 350
                D+REL+R AST++    S + D    QQ  +R +KS +E    + RS+SV IGRI
Sbjct: 67  NHFDDDYRELIRAASTRSTLGRSNNMDVRARQQYIIRDKKSAAEVADNMSRSRSVVIGRI 126

Query: 351 DED-CVCDFGDENIMNIKESSVDKFPRSKSY 440
           DE+   CDF ++  +  K   V  +PRS+SY
Sbjct: 127 DEETSTCDFDEDQDVKAKTGQV--YPRSRSY 155


>ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267722 [Vitis vinifera]
          Length = 149

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
 Frame = +3

Query: 30  RCMKTPIRALTKVRDFYVQSMNNLAN---GMSNVGPEKTXXXXXXXXXXXXXXXXXXXDF 200
           R +  PIR L K +D YV+ M N A    G +  GP                      DF
Sbjct: 13  RIITLPIRVLGKAKDLYVRGMTNCATRGYGNNMGGPA----GMPRSYSYASSRSNDNEDF 68

Query: 201 RELLRVASTKTLSRHEDRNTDQQEFVRQQKSVSEGMKVVPRSQSVAIGRIDEDCVC-DFG 377
           REL+R AS  TL    D N         Q+S +E  KVVPRS SV + RIDED  C DFG
Sbjct: 69  RELVRAASVNTLGHGVDLNA------LLQQSAAEKSKVVPRSCSVGMARIDEDGPCNDFG 122

Query: 378 DENIMNIKESSVDKFPRSKSY 440
           +   +N K  +   +PRS+SY
Sbjct: 123 E---VNFKAKADLMYPRSRSY 140


>ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis]
           gi|223535453|gb|EEF37123.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
 Frame = +3

Query: 24  VKRCMKTPIRALTKVRDFYVQSMNNLANG------MSNVGPEKTXXXXXXXXXXXXXXXX 185
           + + +K+P+R L K RDFYV+SM   ++       M                        
Sbjct: 13  ISKFIKSPLRILLKARDFYVKSMTEYSDRIGYGTFMGCPTGHVVETLPKSYSVNSTKSSS 72

Query: 186 XXXDFRELLRVASTKTLSRHEDRNTDQQEFVRQQKSVSEGMKVVPRSQSVAIGRIDEDCV 365
              D+RELLR AST+ LS   D    Q++  R+  + +     +PRS SV IGRIDE+  
Sbjct: 73  RDDDYRELLRAASTRGLSSRNDLGVLQRQQSRKSPNNTRANISMPRSHSVGIGRIDEEKA 132

Query: 366 CDFGDENIMNIKESSVDKFPRSKSY 440
           CD    N  +IK  + D FPRS+S+
Sbjct: 133 CD----NFDDIKVKT-DVFPRSRSH 152


>ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|222861437|gb|EEE98979.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
 Frame = +3

Query: 3   RSESKVLVKRCMKTPIRALTKVRDFYVQSMNNLAN---------GMSNVGPEKTXXXXXX 155
           +S  +  +K+ +K P+R L + RDFY++ M   ++         G  N  P         
Sbjct: 6   KSRKESTLKKILKAPLRILARARDFYIKGMAEYSDQVCVMSCPTGNFNTMPRS------- 58

Query: 156 XXXXXXXXXXXXXDFRELLRVASTKTL--SRHEDRNTD---QQEFVRQQKSVSEGMKVVP 320
                        D RE LR AST++   SR+   N D   +Q++  ++ +   G   +P
Sbjct: 59  YSVSSTKPNHLDDDRREPLRAASTRSNLGSRNSKINVDVPARQQYSHKKSATRLGDN-MP 117

Query: 321 RSQSVAIGRIDEDCVCDFGDENIMNIKESSVDKFPRSKSY 440
           RS +VAIGRIDE+  CDF +E++    +   + +PRS+SY
Sbjct: 118 RSHTVAIGRIDEEKPCDFDEEDV----KVKTNVYPRSRSY 153


>ref|XP_002320023.1| predicted protein [Populus trichocarpa] gi|222860796|gb|EEE98338.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
 Frame = +3

Query: 3   RSESKVLVKRCMKTPIRALTKVRDFYVQSMNNLANGMSNVGPEKT-----XXXXXXXXXX 167
           +++SK +  R M  P+R L K RD YV+SM + +  MSN GP                  
Sbjct: 6   QNQSKFM--RVMTIPVRVLCKARDVYVKSMTDFSMRMSN-GPSMALLAGQHPPLPKSFSV 62

Query: 168 XXXXXXXXXDFRELLRVASTKTLSRHEDRNTDQQEFVRQQKSVSEG-MKVVPRSQSV--- 335
                    D R+L+R AS ++L    +     Q+  +QQ S++ G  KV+P+S SV   
Sbjct: 63  GSSRSDDGEDHRQLVRAASARSLGHSNEIEMYMQQLRQQQSSMTMGSKKVLPKSSSVGMR 122

Query: 336 AIGRIDEDCVCDFGDENIMNIKESSVDKFPRSKSY 440
            +GRIDED  C F +  +    +      PRS+SY
Sbjct: 123 CMGRIDEDKSCVFEEVGV----DVKPQLGPRSRSY 153


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