BLASTX nr result

ID: Bupleurum21_contig00021301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021301
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT39305.2| Dof domain, zinc finger family protein [Solanum d...   222   1e-55
gb|AEF97723.1| Dof-type zinc finger domain-containing protein [P...   211   3e-52
ref|XP_002532252.1| zinc finger protein, putative [Ricinus commu...   211   4e-52
gb|AEF97724.1| Dof-type zinc finger domain-containing protein [P...   203   9e-50
gb|ADL36679.1| DOF domain class transcription factor [Malus x do...   192   1e-46

>gb|AAT39305.2| Dof domain, zinc finger family protein [Solanum demissum]
          Length = 299

 Score =  222 bits (566), Expect = 1e-55
 Identities = 139/321 (43%), Positives = 176/321 (54%), Gaps = 11/321 (3%)
 Frame = +1

Query: 178  QHEQDMSSHETLESMLVCTKSASQVLDNKKPRPQDQQAQKCPRCDSSNTKFCYYNNYSLT 357
            Q +Q+MSS +TLESMLVCTK      D KKPRP +QQ QKCPRCDS+NTKFCYYNNYSLT
Sbjct: 3    QQQQEMSS-QTLESMLVCTKPDQ---DQKKPRPAEQQPQKCPRCDSANTKFCYYNNYSLT 58

Query: 358  QPRYFCKACRRYWTKGGTLRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXTIHQDHHHPQL 537
            QPRYFCK+CRRYWTKGGTLRNVPVGGGC                        QD+     
Sbjct: 59   QPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKKLSSTTSAKRS--------SQDN----- 105

Query: 538  PLIASNHNHPLLPYD-STDLSLAFARLQ---NGQLGF---HPDNHMSMLGNYANN-DHGS 693
              I+ N ++P+  YD STDLSLAFARLQ   N  L     H +N+MSM+ N  NN    +
Sbjct: 106  --ISPNISNPIPSYDSSTDLSLAFARLQKQTNAHLEIDQEHDNNNMSMMYNTGNNCTSTT 163

Query: 694  FLDAMRCGNYLEAPPMNNGLQNVYYGTDQHHFENVGNMGHDDMGNLPYEDLMNXXXXXXX 873
            FLDA+R G +LE  P + GL    +  + +++ N+G +  +    + Y+           
Sbjct: 164  FLDALR-GGFLENAPNHPGL----FHHNMYNYANMGQLVENGEMGMSYDQDQMSIGTSTT 218

Query: 874  XXXXXXXXXXXKQERPNVGEDA--IEGGGRVVCGYPWQIXXXXXXXXSI-MGDVDTTGRQ 1044
                          R   G D        +V+CG+PWQ         ++   D + +  +
Sbjct: 219  MMTTIVKQEMCNMARSTEGHDLNNSNNNNKVLCGFPWQQMNGDHHVNNMNTNDFEYSTNK 278

Query: 1045 SSWINAFGSSNWHGLLNSPLM 1107
             SW    GSSNWHGL+NSPLM
Sbjct: 279  QSWNGFGGSSNWHGLINSPLM 299


>gb|AEF97723.1| Dof-type zinc finger domain-containing protein [Prunus persica]
          Length = 315

 Score =  211 bits (537), Expect = 3e-52
 Identities = 143/347 (41%), Positives = 181/347 (52%), Gaps = 31/347 (8%)
 Frame = +1

Query: 160  MDLSRTQHEQDMSSHETLESMLVCTKSASQVLD-NKKPRPQDQQAQKCPRCDSSNTKFCY 336
            MD S  Q  Q+MS+H     MLVC+K+  Q    ++KPRPQ +QA KCPRCDS+NTKFCY
Sbjct: 1    MDPSSGQQHQEMSAHSL--DMLVCSKTQQQQQQQDRKPRPQPEQALKCPRCDSTNTKFCY 58

Query: 337  YNNYSLTQPRYFCKACRRYWTKGGTLRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXTIHQ 516
            YNNYSL+QPRYFCKACRRYWTKGGTLRNVPVGGGC                     +   
Sbjct: 59   YNNYSLSQPRYFCKACRRYWTKGGTLRNVPVGGGC---------------RKNKRSSSSS 103

Query: 517  DHHHPQLPLIASNHNH-PLLPYDSTDLSLAFARLQN---GQLGFHPDNHMSMLGNYAN-- 678
                 Q PL  +++N  P L YDS DL+LAFARLQ    GQLGF   +H+S+LGN  N  
Sbjct: 104  KRSQDQQPLTPNSNNPLPSLGYDSNDLTLAFARLQRQSCGQLGFDDQDHLSILGNPNNTA 163

Query: 679  --------NDHG------------SFLDAMRCGNYLEAPPMNNGLQNVYY----GTDQHH 786
                     +HG             F DA+R G +LE    N   QN+YY    G++   
Sbjct: 164  SHGDHSILGNHGLNMNTTSAAAAPGFFDALRTG-FLET--HNGNFQNMYYGFGNGSNSSS 220

Query: 787  FENVGNMGHDDMGNLPYEDLMNXXXXXXXXXXXXXXXXXXKQERPNVGEDAIEGGGRVVC 966
               V N    +MG   +E++ N                  KQE  N  +   E   RV+ 
Sbjct: 221  LGEVENGACGEMGLHTFEEMTN-------STTTAVTVTTMKQELCNARDPQSE-SNRVLW 272

Query: 967  GYPWQIXXXXXXXXSIMGDVDTTGRQSSWINAFGSSNWHGLLNSPLM 1107
            G+PWQ+        +++ +   +GR  SW N    S WHGLL+SPL+
Sbjct: 273  GFPWQL--NGDANNNMVSNECDSGRVESW-NGLAPS-WHGLLHSPLV 315


>ref|XP_002532252.1| zinc finger protein, putative [Ricinus communis]
            gi|223528040|gb|EEF30118.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 284

 Score =  211 bits (536), Expect = 4e-52
 Identities = 140/323 (43%), Positives = 172/323 (53%), Gaps = 27/323 (8%)
 Frame = +1

Query: 220  MLVCTKSASQVLDNKKPRPQDQQAQKCPRCDSSNTKFCYYNNYSLTQPRYFCKACRRYWT 399
            MLVC+K   +    +KPRPQ +QA KCPRCDS+NTKFCYYNNYSL+QPRYFCK+CRRYWT
Sbjct: 1    MLVCSKPHQE----RKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWT 56

Query: 400  KGGTLRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXTIHQDHHHPQLPLIASNHNHPL--- 570
            KGGTLRNVPVGGGC                        QDHH        + H +PL   
Sbjct: 57   KGGTLRNVPVGGGCRKNKRSTKKA--------------QDHHQ------LNPHTNPLTGL 96

Query: 571  --LPYDSTDLSLAFARLQ---NGQLGFHPDNHMSMLGNYAN--------NDHG------- 690
              L YDS DL+LAFARLQ   +GQLGF  DN  S+LGN +N        N +        
Sbjct: 97   PPLSYDSNDLTLAFARLQKQSSGQLGF-DDNDFSILGNPSNAHCDIMLGNPNSINTSAST 155

Query: 691  -SFLDAMRCGNYLEAPPMNNGLQNVYYGTDQHHFENVGNMGHDDMGN---LPYEDLMNXX 858
             SFLDA+R G +L+    NN  QN+YYG      ++V N G   +     LPY+      
Sbjct: 156  PSFLDALRSG-FLDT--QNNNFQNLYYGYGNGSIDDVENSGGVCVSGEMMLPYD----HQ 208

Query: 859  XXXXXXXXXXXXXXXXKQERPNVGEDAIEGGGRVVCGYPWQIXXXXXXXXSIMGDVDTTG 1038
                            KQE  N  ED      +V+ G+PWQI          + D+D +G
Sbjct: 209  DVSTSAATQAVTVTTMKQEFCNGREDHNSNNSKVLFGFPWQINGNG------ISDLD-SG 261

Query: 1039 RQSSWINAFGSSNWHGLLNSPLM 1107
            R+S   +  G+S WHGL+NSPLM
Sbjct: 262  RESWNNHGLGNSTWHGLINSPLM 284


>gb|AEF97724.1| Dof-type zinc finger domain-containing protein [Prunus persica]
          Length = 304

 Score =  203 bits (516), Expect = 9e-50
 Identities = 138/336 (41%), Positives = 175/336 (52%), Gaps = 31/336 (9%)
 Frame = +1

Query: 193  MSSHETLESMLVCTKSASQVLD-NKKPRPQDQQAQKCPRCDSSNTKFCYYNNYSLTQPRY 369
            MS+H     MLVC+K+  Q    ++KPRPQ +QA KCPRCDS+NTKFCYYNNYSL+QPRY
Sbjct: 1    MSAHSL--DMLVCSKTQQQQQQQDRKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRY 58

Query: 370  FCKACRRYWTKGGTLRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXTIHQDHHHPQLPLIA 549
            FCKACRRYWTKGGTLRNVPVGGGC                     +        Q PL  
Sbjct: 59   FCKACRRYWTKGGTLRNVPVGGGC---------------RKNKRSSSSSKRSQDQQPLTP 103

Query: 550  SNHNH-PLLPYDSTDLSLAFARLQN---GQLGFHPDNHMSMLGNYAN----------NDH 687
            +++N  P L YDS DL+LAFARLQ    GQLGF   +H+S+LGN  N           +H
Sbjct: 104  NSNNPLPSLGYDSNDLTLAFARLQRQSCGQLGFDDQDHLSILGNPNNTTSHGDHSILGNH 163

Query: 688  G------------SFLDAMRCGNYLEAPPMNNGLQNVYY----GTDQHHFENVGNMGHDD 819
            G             F DA+R G +LE    N   QN+YY    G++      V N    +
Sbjct: 164  GLNMNTTSAAAAPGFFDALRTG-FLET--HNGNFQNMYYGFGNGSNSSSLGEVENGACGE 220

Query: 820  MGNLPYEDLMNXXXXXXXXXXXXXXXXXXKQERPNVGEDAIEGGGRVVCGYPWQIXXXXX 999
            MG   +E++ N                  KQE  N  +   E   RV+ G+PWQ+     
Sbjct: 221  MGLHTFEEMTN-------STTTAVTVTTMKQELCNARDPQSE-SNRVLWGFPWQL--NGD 270

Query: 1000 XXXSIMGDVDTTGRQSSWINAFGSSNWHGLLNSPLM 1107
               +++ +   +GR  SW N    S WHGLL+SPL+
Sbjct: 271  ANNNMVSNECDSGRVESW-NGLAPS-WHGLLHSPLV 304


>gb|ADL36679.1| DOF domain class transcription factor [Malus x domestica]
          Length = 302

 Score =  192 bits (489), Expect = 1e-46
 Identities = 137/329 (41%), Positives = 172/329 (52%), Gaps = 19/329 (5%)
 Frame = +1

Query: 169  SRTQHEQDMSSHETLESMLVCTKSASQVLDNKKPRPQDQQAQKCPRCDSSNTKFCYYNNY 348
            S  Q  Q+MS+      MLVC+KS  Q  D +KPRPQ +QA KCPRCDS+NTKFCYYNNY
Sbjct: 5    SGQQQHQEMSAQSL--DMLVCSKSQQQQQD-RKPRPQPEQALKCPRCDSTNTKFCYYNNY 61

Query: 349  SLTQPRYFCKACRRYWTKGGTLRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXTIHQDHHH 528
            SL+QPRYFCK+CRRYWTKGGTLRNVPVGGGC                        QD   
Sbjct: 62   SLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSAKRA------------QDQ-- 107

Query: 529  PQLPLIASNHNHPLLPYDSTDLSLAFARLQ-----NGQLGFHPDNHMSMLGNYAN----- 678
               PL  +++  P L YDS DL+LAFARLQ      GQLGF   +H+S+LGN  N     
Sbjct: 108  ---PLTPNSNPLPALGYDSNDLTLAFARLQRQQSCGGQLGFDDHDHISLLGNPTNAPDHN 164

Query: 679  -----NDHGSFLDAMRCGNYLEAPPMNNGLQNVY-YGTDQHHFENVGNMGHDDMGNLPYE 840
                 N    FLDA+R G +LE    N   QN+Y YG    +   V + G     + P+E
Sbjct: 165  ILGNPNSAPRFLDALRTG-FLET--HNGNFQNLYNYGYGNGNLGEVEDCGGGMGIHHPFE 221

Query: 841  DLMNXXXXXXXXXXXXXXXXXXKQERPNVGEDAIEGGGRVVCGYPWQIXXXXXXXXSIMG 1020
            +                     KQE  N      E   RV+ G+PWQ+        +++G
Sbjct: 222  E------GTTNSTTTAVTVTTMKQELFNAQS---ESSNRVLWGFPWQM-NGGDHHSNMVG 271

Query: 1021 DVD---TTGRQSSWINAFGSSNWHGLLNS 1098
            + +    +GR+ SW N   SS  HGLL++
Sbjct: 272  NSNHEYDSGRE-SW-NGIASSWQHGLLHT 298


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