BLASTX nr result

ID: Bupleurum21_contig00021300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021300
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265...   121   7e-26
ref|XP_002302720.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|ABK94023.1| unknown [Populus trichocarpa]                          119   3e-25
emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]   119   3e-25
ref|XP_002523102.1| conserved hypothetical protein [Ricinus comm...   117   8e-25

>ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265898 [Vitis vinifera]
          Length = 162

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/99 (57%), Positives = 73/99 (73%)
 Frame = +1

Query: 52  SMSLIMIFTLCFSLLCLTPPSTAATAYDLLQSYGFPAGLLPIGVQGYDLDQSTGKFSLYL 231
           S   +++  + F    +T    + TAY++LQSY FP GLLP G  GYDLD+ TGKF+ Y 
Sbjct: 2   SRPAVLVLCVIFLSSIVTADDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYF 61

Query: 232 NGSCSFSVEGSYQLKYKSEISGHIAKNRLTNLSGISVKI 348
           NGSC FS+EGSYQLKYKS ISG+I++N+LT LSGISVK+
Sbjct: 62  NGSCGFSLEGSYQLKYKSTISGYISQNKLTKLSGISVKV 100


>ref|XP_002302720.1| predicted protein [Populus trichocarpa] gi|222844446|gb|EEE81993.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/97 (58%), Positives = 71/97 (73%)
 Frame = +1

Query: 58  SLIMIFTLCFSLLCLTPPSTAATAYDLLQSYGFPAGLLPIGVQGYDLDQSTGKFSLYLNG 237
           +L   F L  SL   +      T YD+L  Y FP G+LP G  GYDLD++TG+F  YLNG
Sbjct: 3   NLTFFFVLLSSLAISSFTDNLPTTYDVLSGYNFPIGILPKGATGYDLDKATGRFRAYLNG 62

Query: 238 SCSFSVEGSYQLKYKSEISGHIAKNRLTNLSGISVKI 348
           SCSFS+EGSYQLKYKS +SG+I++NRLT+LSG+SVKI
Sbjct: 63  SCSFSLEGSYQLKYKSTVSGYISENRLTDLSGVSVKI 99


>gb|ABK94023.1| unknown [Populus trichocarpa]
          Length = 167

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/97 (58%), Positives = 71/97 (73%)
 Frame = +1

Query: 58  SLIMIFTLCFSLLCLTPPSTAATAYDLLQSYGFPAGLLPIGVQGYDLDQSTGKFSLYLNG 237
           +L   F L  SL   +      T YD+L  Y FP G+LP G  GYDLD++TG+F  YLNG
Sbjct: 6   NLTFFFVLLSSLAISSFTDNLPTTYDVLSGYNFPIGILPKGATGYDLDKATGRFRAYLNG 65

Query: 238 SCSFSVEGSYQLKYKSEISGHIAKNRLTNLSGISVKI 348
           SCSFS+EGSYQLKYKS +SG+I++NRLT+LSG+SVKI
Sbjct: 66  SCSFSLEGSYQLKYKSTVSGYISENRLTDLSGVSVKI 102


>emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]
          Length = 162

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/99 (56%), Positives = 72/99 (72%)
 Frame = +1

Query: 52  SMSLIMIFTLCFSLLCLTPPSTAATAYDLLQSYGFPAGLLPIGVQGYDLDQSTGKFSLYL 231
           S   +++  + F    +T    + TAY++LQSY FP GLLP G  GYDLD+ TGKF+ Y 
Sbjct: 2   SRPAVLVLCVIFLSSIVTADDDSPTAYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYF 61

Query: 232 NGSCSFSVEGSYQLKYKSEISGHIAKNRLTNLSGISVKI 348
           NGSC FS+EGSYQLKYKS ISG+I++N+LT LSG SVK+
Sbjct: 62  NGSCGFSLEGSYQLKYKSTISGYISQNKLTKLSGXSVKV 100


>ref|XP_002523102.1| conserved hypothetical protein [Ricinus communis]
           gi|223537664|gb|EEF39287.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score =  117 bits (294), Expect = 8e-25
 Identities = 63/103 (61%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
 Frame = +1

Query: 55  MSLIMIFTLCFSLLCLTPPSTAA-----TAYDLLQSYGFPAGLLPIGVQGYDLDQSTGKF 219
           MSL  I T  F LL L    TAA     TAY++L  Y FP G+LP GV GY+LD++TGKF
Sbjct: 1   MSLTAITT--FLLLLLHSSLTAAAGDTPTAYEVLAGYNFPVGILPKGVTGYELDRTTGKF 58

Query: 220 SLYLNGSCSFSVEGSYQLKYKSEISGHIAKNRLTNLSGISVKI 348
             YLNGSCSFS++GSYQLKYKS ISG+I+  +LTNLSG+SVK+
Sbjct: 59  RAYLNGSCSFSLQGSYQLKYKSTISGYISDRKLTNLSGVSVKV 101


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