BLASTX nr result
ID: Bupleurum21_contig00021297
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00021297
(491 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326470.1| predicted protein [Populus trichocarpa] gi|2... 68 1e-25
gb|ABK94426.1| unknown [Populus trichocarpa] 68 1e-25
gb|EAY74854.1| hypothetical protein OsI_02745 [Oryza sativa Indi... 59 1e-24
ref|NP_001043502.1| Os01g0603000 [Oryza sativa Japonica Group] g... 59 1e-24
gb|ABR25759.1| nuclear antigen [Oryza sativa Indica Group] 59 1e-24
>ref|XP_002326470.1| predicted protein [Populus trichocarpa] gi|222833792|gb|EEE72269.1|
predicted protein [Populus trichocarpa]
Length = 374
Score = 68.2 bits (165), Expect(3) = 1e-25
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = -1
Query: 296 ERKDLESLKTEARKVEMDKDLASMQQLSSKKSNDEIFVKLGSYKVSRK 153
+RK L SLK E RKV +DKDL SMQQLSSKKSNDEIF+KLGS K RK
Sbjct: 260 KRKALLSLKAEERKVGLDKDLQSMQQLSSKKSNDEIFIKLGSEKDKRK 307
Score = 48.9 bits (115), Expect(3) = 1e-25
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 177 GLLQSKQKDIAEEEERTAKSLSTNEFLKPAEGETYHS-GGGQGQGR 43
G + K+KD A++E+R K++S NEFLKPA G+ Y++ G G+G+GR
Sbjct: 300 GSEKDKRKDAADKEDRAKKAVSINEFLKPAGGDRYYNPGRGRGRGR 345
Score = 44.3 bits (103), Expect(3) = 1e-25
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = -2
Query: 412 ALSRGIQMETRDKLDIEPEVK*PENTEMTLEEYEKVLEEKGK 287
A S+ ++D EPE K PE+ EMTLEEYEKVLEEK K
Sbjct: 221 AASKDAADASKDAAVNEPEEKEPEDKEMTLEEYEKVLEEKRK 262
>gb|ABK94426.1| unknown [Populus trichocarpa]
Length = 370
Score = 68.2 bits (165), Expect(3) = 1e-25
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = -1
Query: 296 ERKDLESLKTEARKVEMDKDLASMQQLSSKKSNDEIFVKLGSYKVSRK 153
+RK L SLK E RKV +DKDL SMQQLSSKKSNDEIF+KLGS K RK
Sbjct: 256 KRKALLSLKAEERKVGLDKDLQSMQQLSSKKSNDEIFIKLGSEKDKRK 303
Score = 48.9 bits (115), Expect(3) = 1e-25
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 177 GLLQSKQKDIAEEEERTAKSLSTNEFLKPAEGETYHS-GGGQGQGR 43
G + K+KD A++E+R K++S NEFLKPA G+ Y++ G G+G+GR
Sbjct: 296 GSEKDKRKDAADKEDRAKKAVSINEFLKPAGGDRYYNPGRGRGRGR 341
Score = 44.3 bits (103), Expect(3) = 1e-25
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = -2
Query: 412 ALSRGIQMETRDKLDIEPEVK*PENTEMTLEEYEKVLEEKGK 287
A S+ ++D EPE K PE+ EMTLEEYEKVLEEK K
Sbjct: 217 AASKDAADASKDAAVNEPEEKEPEDKEMTLEEYEKVLEEKRK 258
>gb|EAY74854.1| hypothetical protein OsI_02745 [Oryza sativa Indica Group]
Length = 380
Score = 59.3 bits (142), Expect(3) = 1e-24
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -3
Query: 168 QSKQKDIAEEEERTAKSLSTNEFLKPAEGETYHSGGGQGQGR 43
+ K+K+ E +ERT KSLS NEFLKPAEGE Y+S GG+G+GR
Sbjct: 297 KDKKKENVERDERTRKSLSINEFLKPAEGERYYSPGGRGRGR 338
Score = 58.5 bits (140), Expect(3) = 1e-24
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -1
Query: 296 ERKDLESLKTEARKVEMDKDLASMQQLSSKKSNDEIFVKLGSYKVSRK 153
+RK L SLK E RKV +DK+L SMQQLS KK +DE+F+KLGS K +K
Sbjct: 254 KRKALLSLKVEERKVVVDKELQSMQQLSVKKDSDEVFIKLGSDKDKKK 301
Score = 40.0 bits (92), Expect(3) = 1e-24
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -2
Query: 364 EPEVK*PENTEMTLEEYEKVLEEKGK 287
E E K PE+ EMTLEEYEKVLEEK K
Sbjct: 231 EEEEKEPEDKEMTLEEYEKVLEEKRK 256
>ref|NP_001043502.1| Os01g0603000 [Oryza sativa Japonica Group]
gi|53791529|dbj|BAD52651.1| putative nuclear RNA binding
protein [Oryza sativa Japonica Group]
gi|53793416|dbj|BAD53119.1| putative nuclear RNA binding
protein [Oryza sativa Japonica Group]
gi|113533033|dbj|BAF05416.1| Os01g0603000 [Oryza sativa
Japonica Group] gi|125571087|gb|EAZ12602.1| hypothetical
protein OsJ_02509 [Oryza sativa Japonica Group]
Length = 378
Score = 59.3 bits (142), Expect(3) = 1e-24
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -3
Query: 168 QSKQKDIAEEEERTAKSLSTNEFLKPAEGETYHSGGGQGQGR 43
+ K+K+ E +ERT KSLS NEFLKPAEGE Y+S GG+G+GR
Sbjct: 297 KDKKKENVERDERTRKSLSINEFLKPAEGERYYSPGGRGRGR 338
Score = 58.5 bits (140), Expect(3) = 1e-24
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -1
Query: 296 ERKDLESLKTEARKVEMDKDLASMQQLSSKKSNDEIFVKLGSYKVSRK 153
+RK L SLK E RKV +DK+L SMQQLS KK +DE+F+KLGS K +K
Sbjct: 254 KRKALLSLKVEERKVVVDKELQSMQQLSVKKDSDEVFIKLGSDKDKKK 301
Score = 40.0 bits (92), Expect(3) = 1e-24
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -2
Query: 364 EPEVK*PENTEMTLEEYEKVLEEKGK 287
E E K PE+ EMTLEEYEKVLEEK K
Sbjct: 231 EEEEKEPEDKEMTLEEYEKVLEEKRK 256
>gb|ABR25759.1| nuclear antigen [Oryza sativa Indica Group]
Length = 243
Score = 59.3 bits (142), Expect(3) = 1e-24
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -3
Query: 168 QSKQKDIAEEEERTAKSLSTNEFLKPAEGETYHSGGGQGQGR 43
+ K+K+ E +ERT KSLS NEFLKPAEGE Y+S GG+G+GR
Sbjct: 185 KDKKKENVERDERTRKSLSINEFLKPAEGERYYSPGGRGRGR 226
Score = 58.5 bits (140), Expect(3) = 1e-24
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -1
Query: 296 ERKDLESLKTEARKVEMDKDLASMQQLSSKKSNDEIFVKLGSYKVSRK 153
+RK L SLK E RKV +DK+L SMQQLS KK +DE+F+KLGS K +K
Sbjct: 142 KRKALLSLKVEERKVVVDKELQSMQQLSVKKDSDEVFIKLGSDKDKKK 189
Score = 40.0 bits (92), Expect(3) = 1e-24
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -2
Query: 364 EPEVK*PENTEMTLEEYEKVLEEKGK 287
E E K PE+ EMTLEEYEKVLEEK K
Sbjct: 119 EEEEKEPEDKEMTLEEYEKVLEEKRK 144