BLASTX nr result

ID: Bupleurum21_contig00021283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021283
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis ...   223   1e-56
ref|XP_002304316.1| GRAS family transcription factor [Populus tr...   223   1e-56
emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]   223   1e-56
ref|XP_002306498.1| GRAS family transcription factor [Populus tr...   219   2e-55
ref|XP_002525254.1| transcription factor, putative [Ricinus comm...   215   3e-54

>ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis vinifera]
          Length = 454

 Score =  223 bits (569), Expect = 1e-56
 Identities = 117/158 (74%), Positives = 137/158 (86%), Gaps = 7/158 (4%)
 Frame = +3

Query: 3   LIDAIANRLEGPPLVKLTVAGATEDVPPMLDLSYEELGMKLVNFARSRNIIMEFRVIPST 182
           LIDA+ANR EGPPLVKLTVAGATEDVPPMLDLSYEELG KLVNFARSRN+++EFRVIPST
Sbjct: 181 LIDALANRPEGPPLVKLTVAGATEDVPPMLDLSYEELGSKLVNFARSRNVMLEFRVIPST 240

Query: 183 SSNGFASFIEELKVQNLVRANGIEAVVINCHMMLHYIPEETLNPF---SFSSNTIVSSL- 350
           SS+GF+S I++L+VQ+LV A   EA+++NCHMMLHYIPEETL+     + SS ++ SS  
Sbjct: 241 SSDGFSSLIDQLRVQHLVYAESGEALIVNCHMMLHYIPEETLSAIHSTNSSSYSVESSSP 300

Query: 351 ---RTMFLKAIRSLNPTIVMLVDEDADFTSNNLVSRLR 455
              RTMFLKA+R+LNPTIV+LVDEDADFTSNNLV RLR
Sbjct: 301 SYHRTMFLKALRTLNPTIVILVDEDADFTSNNLVCRLR 338


>ref|XP_002304316.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841748|gb|EEE79295.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 451

 Score =  223 bits (569), Expect = 1e-56
 Identities = 115/159 (72%), Positives = 135/159 (84%), Gaps = 8/159 (5%)
 Frame = +3

Query: 3   LIDAIANRLEGPPLVKLTVAGATEDVPPMLDLSYEELGMKLVNFARSRNIIMEFRVIPST 182
           L+DAIANR E PPL+KLTVAGATEDVPP+LDLSYEELG KLVNFARSRNIIMEFRVIPS+
Sbjct: 177 LVDAIANRFEVPPLIKLTVAGATEDVPPLLDLSYEELGSKLVNFARSRNIIMEFRVIPSS 236

Query: 183 SSNGFASFIEELKVQNLVRANGIEAVVINCHMMLHYIPEETL--------NPFSFSSNTI 338
            ++GF+SFIE+L+VQ+LV A   EA+VINCHMMLHYIPEETL        N +S+ S++ 
Sbjct: 237 YADGFSSFIEQLRVQHLVYAESGEALVINCHMMLHYIPEETLSGIPSTNSNTYSYESSSS 296

Query: 339 VSSLRTMFLKAIRSLNPTIVMLVDEDADFTSNNLVSRLR 455
             S RTMFLK++RSL+PT+V+LVDEDAD TSNNLV RLR
Sbjct: 297 SMSFRTMFLKSLRSLDPTLVVLVDEDADLTSNNLVCRLR 335


>emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]
          Length = 455

 Score =  223 bits (569), Expect = 1e-56
 Identities = 117/158 (74%), Positives = 137/158 (86%), Gaps = 7/158 (4%)
 Frame = +3

Query: 3   LIDAIANRLEGPPLVKLTVAGATEDVPPMLDLSYEELGMKLVNFARSRNIIMEFRVIPST 182
           LIDA+ANR EGPPLVKLTVAGATEDVPPMLDLSYEELG KLVNFARSRN+++EFRVIPST
Sbjct: 182 LIDALANRPEGPPLVKLTVAGATEDVPPMLDLSYEELGSKLVNFARSRNVMLEFRVIPST 241

Query: 183 SSNGFASFIEELKVQNLVRANGIEAVVINCHMMLHYIPEETLNPF---SFSSNTIVSSL- 350
           SS+GF+S I++L+VQ+LV A   EA+++NCHMMLHYIPEETL+     + SS ++ SS  
Sbjct: 242 SSDGFSSLIDQLRVQHLVYAESGEALIVNCHMMLHYIPEETLSAIHSTNSSSYSVESSSP 301

Query: 351 ---RTMFLKAIRSLNPTIVMLVDEDADFTSNNLVSRLR 455
              RTMFLKA+R+LNPTIV+LVDEDADFTSNNLV RLR
Sbjct: 302 SYHRTMFLKALRTLNPTIVILVDEDADFTSNNLVCRLR 339


>ref|XP_002306498.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222855947|gb|EEE93494.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 457

 Score =  219 bits (558), Expect = 2e-55
 Identities = 116/160 (72%), Positives = 135/160 (84%), Gaps = 9/160 (5%)
 Frame = +3

Query: 3   LIDAIANRLEGPPLVKLTVAGATEDVPPMLDLSYEELGMKLVNFARSRNIIMEFRVIPST 182
           LIDAIANR E PPL+KLTVAGATEDVPPMLDLSYEELG KLVNFA SRN+IMEFR+IPS+
Sbjct: 182 LIDAIANRFEVPPLIKLTVAGATEDVPPMLDLSYEELGSKLVNFAWSRNVIMEFRIIPSS 241

Query: 183 SSNGFASFIEELKVQNLVRANGIEAVVINCHMMLHYIPEETL--------NPFSF-SSNT 335
            ++GF+S IE+L+VQ+LV A   EA+VINCHMMLHYIPEETL        NP+S+ SS +
Sbjct: 242 YADGFSSLIEQLRVQHLVHAESGEALVINCHMMLHYIPEETLSDFPSSKSNPYSYESSCS 301

Query: 336 IVSSLRTMFLKAIRSLNPTIVMLVDEDADFTSNNLVSRLR 455
            +SS RT FLK++RSL+PTIV+LVDEDAD TSNNL SRLR
Sbjct: 302 SMSSFRTTFLKSLRSLDPTIVVLVDEDADLTSNNLESRLR 341


>ref|XP_002525254.1| transcription factor, putative [Ricinus communis]
           gi|223535412|gb|EEF37082.1| transcription factor,
           putative [Ricinus communis]
          Length = 440

 Score =  215 bits (547), Expect = 3e-54
 Identities = 112/163 (68%), Positives = 135/163 (82%), Gaps = 12/163 (7%)
 Frame = +3

Query: 3   LIDAIANRLEGPPLVKLTVAGATEDVPPMLDLSYEELGMKLVNFARSRNIIMEFRVIPST 182
           LIDAIANR E  P++KLTVAG TED+PPMLDLSYEELG KL+NFARSRN+IMEFRV+ S+
Sbjct: 162 LIDAIANRFEVTPMIKLTVAGCTEDIPPMLDLSYEELGCKLINFARSRNVIMEFRVVDSS 221

Query: 183 SSNGFASFIEELKVQNLVRANGIEAVVINCHMMLHYIPEETL----------NPFSF--S 326
            ++GF+S IE+L+VQNLV  +  EA+VINCHM+ HYIPEETL          NP+SF  S
Sbjct: 222 YADGFSSLIEQLRVQNLVYTDSGEALVINCHMLPHYIPEETLSGIHNTTNSSNPYSFESS 281

Query: 327 SNTIVSSLRTMFLKAIRSLNPTIVMLVDEDADFTSNNLVSRLR 455
           S++ +SSLRTMFLK++RSL+PTIV+LVDEDAD TSNNLV RLR
Sbjct: 282 SSSSMSSLRTMFLKSLRSLDPTIVVLVDEDADLTSNNLVCRLR 324


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