BLASTX nr result

ID: Bupleurum21_contig00021267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021267
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35791.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002264017.1| PREDICTED: ubiquitin-conjugating enzyme E2 3...    99   3e-19
ref|NP_001234557.1| ubiquitin conjugating enzyme 2 [Solanum lyco...    98   8e-19
gb|AFV96170.1| ubiquitin conjugating enzyme J2 [Camellia oleifera]     97   1e-18
emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera]    85   5e-15

>emb|CBI35791.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/90 (52%), Positives = 65/90 (72%)
 Frame = -2

Query: 382 TFRNLFPEYVEMYERQLSEKAAPEQKREEGASEELRPLLEHRGQAKKEEVREPQPQRDLK 203
           TFR +FPEYVE Y +QLSE++  EQ     + E+ R LL+  G + +E+++  +  +D +
Sbjct: 216 TFRKMFPEYVEKYNQQLSEQSLSEQGSPAPSQEDSRRLLDKVGNSMREDLKRVETPKDTR 275

Query: 202 NGRRQNFPTWVLVLLVSIFGVVMTLPLLQL 113
             RRQ+FPTW+LVLLVSIFG+VM LPLLQL
Sbjct: 276 KNRRQSFPTWMLVLLVSIFGIVMALPLLQL 305


>ref|XP_002264017.1| PREDICTED: ubiquitin-conjugating enzyme E2 34-like isoform 1 [Vitis
           vinifera]
          Length = 237

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/90 (52%), Positives = 65/90 (72%)
 Frame = -2

Query: 382 TFRNLFPEYVEMYERQLSEKAAPEQKREEGASEELRPLLEHRGQAKKEEVREPQPQRDLK 203
           TFR +FPEYVE Y +QLSE++  EQ     + E+ R LL+  G + +E+++  +  +D +
Sbjct: 148 TFRKMFPEYVEKYNQQLSEQSLSEQGSPAPSQEDSRRLLDKVGNSMREDLKRVETPKDTR 207

Query: 202 NGRRQNFPTWVLVLLVSIFGVVMTLPLLQL 113
             RRQ+FPTW+LVLLVSIFG+VM LPLLQL
Sbjct: 208 KNRRQSFPTWMLVLLVSIFGIVMALPLLQL 237


>ref|NP_001234557.1| ubiquitin conjugating enzyme 2 [Solanum lycopersicum]
           gi|14484934|gb|AAK62819.1| ubiquitin conjugating enzyme
           2 [Solanum lycopersicum]
          Length = 239

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
 Frame = -2

Query: 382 TFRNLFPEYVEMYERQ-LSEKAAPEQKREEGA-SEELRPLLEHRGQAKKEEVREPQPQRD 209
           TFR LFPEYVE YE+Q LS +  PEQ     A +++ RPLLE    + K+EV   +P +D
Sbjct: 148 TFRKLFPEYVEKYEQQQLSSQPVPEQVSSMPAGADKSRPLLEEHDNSPKDEVNRVKPLKD 207

Query: 208 LKNGRRQNFPTWVLVLLVSIFGVVMTLPLLQL 113
           +KN +R++ PTW+L+LLVSIFGVVM LPLLQL
Sbjct: 208 VKNQQRKSVPTWLLLLLVSIFGVVMALPLLQL 239


>gb|AFV96170.1| ubiquitin conjugating enzyme J2 [Camellia oleifera]
          Length = 239

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/92 (55%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
 Frame = -2

Query: 382 TFRNLFPEYVEMYERQ-LSEKAAPEQKREEGASEE-LRPLLEHRGQAKKEEVREPQPQRD 209
           TFR +FPEYVE YE+Q LSE+  PEQ       +E  RPLL+  G + +E++ + +  RD
Sbjct: 148 TFRKMFPEYVEKYEQQQLSEQPVPEQVSTTPTQQEGHRPLLDKTGNSTQEDLNKVEALRD 207

Query: 208 LKNGRRQNFPTWVLVLLVSIFGVVMTLPLLQL 113
            +N R+Q+FPTW+L+LLVSIFGVVM LPLLQL
Sbjct: 208 PRNRRKQSFPTWMLLLLVSIFGVVMALPLLQL 239


>emb|CAN79607.1| hypothetical protein VITISV_027501 [Vitis vinifera]
          Length = 1694

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/81 (48%), Positives = 57/81 (70%)
 Frame = -2

Query: 382  TFRNLFPEYVEMYERQLSEKAAPEQKREEGASEELRPLLEHRGQAKKEEVREPQPQRDLK 203
            TFR +FPEYVE Y +QLSE++  EQ     + E+ R LL+  G + +E+++  +  +D +
Sbjct: 1431 TFRKMFPEYVEKYNQQLSEQSLSEQGSPAPSQEDSRRLLDKVGNSMREDLKRVETPKDTR 1490

Query: 202  NGRRQNFPTWVLVLLVSIFGV 140
              RRQ+FPTW+LVLLVSIFG+
Sbjct: 1491 KNRRQSFPTWMLVLLVSIFGI 1511


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